Index

_

__array__() (nirs4all.data.performance.lazy_loader.LazyArray method) (nirs4all.data.performance.LazyArray method) __contains__() (nirs4all.data.synthetic.ComponentLibrary method) (nirs4all.data.synthetic.components.ComponentLibrary method) __delitem__() (nirs4all.pipeline.config.context.DataSelector method) (nirs4all.pipeline.config.DataSelector method) __enter__() (nirs4all.api.Session method) (nirs4all.api.session.Session method) (nirs4all.core.logging.context.LogContext method) (nirs4all.core.logging.EvaluationProgress method) (nirs4all.core.logging.LogContext method) (nirs4all.core.logging.progress.EvaluationProgress method) (nirs4all.core.logging.progress.ProgressBar method) (nirs4all.core.logging.progress.SpinnerProgress method) (nirs4all.core.logging.ProgressBar method) (nirs4all.core.logging.SpinnerProgress method) (nirs4all.Session method) __exit__() (nirs4all.api.Session method) (nirs4all.api.session.Session method) (nirs4all.core.logging.context.LogContext method) (nirs4all.core.logging.EvaluationProgress method) (nirs4all.core.logging.LogContext method) (nirs4all.core.logging.progress.EvaluationProgress method) (nirs4all.core.logging.progress.ProgressBar method) (nirs4all.core.logging.progress.SpinnerProgress method) (nirs4all.core.logging.ProgressBar method) (nirs4all.core.logging.SpinnerProgress method) (nirs4all.Session method) __getattr__() (in module nirs4all.operators.models) __getitem__() (nirs4all.data.performance.lazy_loader.LazyArray method) (nirs4all.data.performance.LazyArray method) (nirs4all.data.synthetic.ComponentLibrary method) (nirs4all.data.synthetic.components.ComponentLibrary method) (nirs4all.pipeline.config.context.DataSelector method) (nirs4all.pipeline.config.DataSelector method) (nirs4all.visualization.analysis.branch.BranchSummary method) (nirs4all.visualization.analysis.BranchSummary method) (nirs4all.visualization.BranchSummary method) __iter__() (nirs4all.data.synthetic.ComponentLibrary method) (nirs4all.data.synthetic.components.ComponentLibrary method) (nirs4all.pipeline.config.context.DataSelector method) (nirs4all.pipeline.config.DataSelector method) __len__() (nirs4all.api.PredictResult method) (nirs4all.api.result.PredictResult method) (nirs4all.data.performance.lazy_loader.LazyArray method) (nirs4all.data.performance.LazyArray method) (nirs4all.data.Predictions method) (nirs4all.data.predictions.Predictions method) (nirs4all.data.synthetic.ComponentLibrary method) (nirs4all.data.synthetic.components.ComponentLibrary method) (nirs4all.pipeline.config.context.DataSelector method) (nirs4all.pipeline.config.DataSelector method) (nirs4all.PredictResult method) (nirs4all.visualization.analysis.branch.BranchSummary method) (nirs4all.visualization.analysis.BranchSummary method) (nirs4all.visualization.BranchSummary method) (nirs4all.visualization.prediction_cache.PredictionCache method) __new__() (nirs4all.data.loaders.base.LoaderRegistry static method) (nirs4all.data.loaders.LoaderRegistry static method) __post_init__() (nirs4all.analysis.results.TransferResult method) (nirs4all.analysis.TransferResult method) (nirs4all.api.ExplainResult method) (nirs4all.api.PredictResult method) (nirs4all.api.result.ExplainResult method) (nirs4all.api.result.PredictResult method) (nirs4all.controllers.data.merge.SourceMergeConfig method) (nirs4all.controllers.data.metadata_partitioner.MetadataPartitionConfig method) (nirs4all.controllers.models.ReconstructorConfig method) (nirs4all.controllers.models.stacking.config.ReconstructorConfig method) (nirs4all.controllers.models.stacking.ReconstructorConfig method) (nirs4all.data.aggregation.AggregationConfig method) (nirs4all.data.aggregation.aggregator.AggregationConfig method) (nirs4all.data.synthetic.config.SyntheticDatasetConfig method) (nirs4all.data.synthetic.environmental.MoistureConfig method) (nirs4all.data.synthetic.MoistureConfig method) (nirs4all.data.synthetic.SyntheticDatasetConfig method) (nirs4all.ExplainResult method) (nirs4all.operators.data.BranchPredictionConfig method) (nirs4all.operators.data.merge.BranchPredictionConfig method) (nirs4all.operators.data.merge.MergeConfig method) (nirs4all.operators.data.merge.SourceBranchConfig method) (nirs4all.operators.data.merge.SourceMergeConfig method) (nirs4all.operators.data.MergeConfig method) (nirs4all.operators.data.repetition.RepetitionConfig method) (nirs4all.operators.data.RepetitionConfig method) (nirs4all.operators.data.SourceMergeConfig method) (nirs4all.operators.models.meta.StackingConfig method) (nirs4all.operators.models.StackingConfig method) (nirs4all.PredictResult method) (nirs4all.visualization.charts.ChartConfig method) (nirs4all.visualization.charts.config.ChartConfig method) __repr__() (nirs4all.api.ExplainResult method) (nirs4all.api.PredictResult method) (nirs4all.api.result.ExplainResult method) (nirs4all.api.result.PredictResult method) (nirs4all.api.result.RunResult method) (nirs4all.api.RunResult method) (nirs4all.api.Session method) (nirs4all.api.session.Session method) (nirs4all.data.indexer.Indexer method) (nirs4all.data.PredictionResult method) (nirs4all.data.PredictionResultsList method) (nirs4all.data.Predictions method) (nirs4all.data.predictions.PredictionResult method) (nirs4all.data.predictions.PredictionResultsList method) (nirs4all.data.predictions.Predictions method) (nirs4all.data.synthetic.builder.SyntheticDatasetBuilder method) (nirs4all.data.synthetic.generator.SyntheticNIRSGenerator method) (nirs4all.data.synthetic.SyntheticDatasetBuilder method) (nirs4all.data.synthetic.SyntheticNIRSGenerator method) (nirs4all.data.targets.Targets method) (nirs4all.ExplainResult method) (nirs4all.operators.filters.high_leverage.HighLeverageFilter method) (nirs4all.operators.filters.HighLeverageFilter method) (nirs4all.operators.filters.metadata.MetadataFilter method) (nirs4all.operators.filters.MetadataFilter method) (nirs4all.operators.filters.spectral_quality.SpectralQualityFilter method) (nirs4all.operators.filters.SpectralQualityFilter method) (nirs4all.operators.filters.x_outlier.XOutlierFilter method) (nirs4all.operators.filters.XOutlierFilter method) (nirs4all.operators.filters.y_outlier.YOutlierFilter method) (nirs4all.operators.filters.YOutlierFilter method) (nirs4all.operators.models.FCKPLS method) (nirs4all.operators.models.IntervalPLS method) (nirs4all.operators.models.KernelPLS method) (nirs4all.operators.models.KOPLS method) (nirs4all.operators.models.LWPLS method) (nirs4all.operators.models.MBPLS method) (nirs4all.operators.models.meta.MetaModel method) (nirs4all.operators.models.MetaModel method) (nirs4all.operators.models.OKLMPLS method) (nirs4all.operators.models.RecursivePLS method) (nirs4all.operators.models.RobustPLS method) (nirs4all.operators.models.SIMPLS method) (nirs4all.operators.models.sklearn.FCKPLS method) (nirs4all.operators.models.sklearn.fckpls.FCKPLS method) (nirs4all.operators.models.sklearn.IntervalPLS method) (nirs4all.operators.models.sklearn.ipls.IntervalPLS method) (nirs4all.operators.models.sklearn.KernelPLS method) (nirs4all.operators.models.sklearn.KOPLS method) (nirs4all.operators.models.sklearn.kopls.KOPLS method) (nirs4all.operators.models.sklearn.LWPLS method) (nirs4all.operators.models.sklearn.lwpls.LWPLS method) (nirs4all.operators.models.sklearn.MBPLS method) (nirs4all.operators.models.sklearn.mbpls.MBPLS method) (nirs4all.operators.models.sklearn.nlpls.KernelPLS method) (nirs4all.operators.models.sklearn.OKLMPLS method) (nirs4all.operators.models.sklearn.oklmpls.OKLMPLS method) (nirs4all.operators.models.sklearn.recursive_pls.RecursivePLS method) (nirs4all.operators.models.sklearn.RecursivePLS method) (nirs4all.operators.models.sklearn.robust_pls.RobustPLS method) (nirs4all.operators.models.sklearn.RobustPLS method) (nirs4all.operators.models.sklearn.SIMPLS method) (nirs4all.operators.models.sklearn.simpls.SIMPLS method) (nirs4all.operators.models.sklearn.SparsePLS method) (nirs4all.operators.models.sklearn.sparsepls.SparsePLS method) (nirs4all.operators.models.SparsePLS method) (nirs4all.operators.splitters.grouped_wrapper.GroupedSplitterWrapper method) (nirs4all.operators.splitters.GroupedSplitterWrapper method) (nirs4all.operators.transforms.CARS method) (nirs4all.operators.transforms.feature_selection.CARS method) (nirs4all.operators.transforms.feature_selection.MCUVE method) (nirs4all.operators.transforms.MCUVE method) (nirs4all.operators.transforms.Resampler method) (nirs4all.operators.transforms.resampler.Resampler method) (nirs4all.operators.YOutlierFilter method) (nirs4all.PredictResult method) (nirs4all.RunResult method) (nirs4all.Session method) (nirs4all.sklearn.classifier.NIRSPipelineClassifier method) (nirs4all.sklearn.NIRSPipeline method) (nirs4all.sklearn.NIRSPipelineClassifier method) (nirs4all.sklearn.pipeline.NIRSPipeline method) (nirs4all.visualization.analysis.branch.BranchSummary method) (nirs4all.visualization.analysis.BranchSummary method) (nirs4all.visualization.BranchSummary method)

__setitem__() (nirs4all.pipeline.config.context.DataSelector method) (nirs4all.pipeline.config.DataSelector method) __sklearn_clone__() (nirs4all.operators.transforms.RangeDiscretizer method) (nirs4all.operators.transforms.targets.RangeDiscretizer method) __str__() (nirs4all.api.ExplainResult method) (nirs4all.api.PredictResult method) (nirs4all.api.result.ExplainResult method) (nirs4all.api.result.PredictResult method) (nirs4all.api.result.RunResult method) (nirs4all.api.RunResult method) (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.indexer.Indexer method) (nirs4all.data.PredictionResult method) (nirs4all.data.Predictions method) (nirs4all.data.predictions.PredictionResult method) (nirs4all.data.predictions.Predictions method) (nirs4all.data.SpectroDataset method) (nirs4all.data.targets.Targets method) (nirs4all.ExplainResult method) (nirs4all.pipeline.config.generator.ValidationError method) (nirs4all.pipeline.config.generator.ValidationResult method) (nirs4all.PredictResult method) (nirs4all.RunResult method) (nirs4all.sklearn.NIRSPipeline method) (nirs4all.sklearn.pipeline.NIRSPipeline method)

A

abbreviate_metric() (in module nirs4all.core.metrics) ABORT (nirs4all.data.schema.config.NAPolicy attribute) (nirs4all.data.schema.NAPolicy attribute) absolute_threshold (nirs4all.operators.filters.high_leverage.HighLeverageFilter attribute) (nirs4all.operators.filters.HighLeverageFilter attribute) ABSORBANCE (nirs4all.data.schema.config.SignalTypeEnum attribute) (nirs4all.data.schema.SignalTypeEnum attribute) (nirs4all.data.signal_type.SignalType attribute) (nirs4all.data.SignalType attribute) absorbance_to_reflectance() (nirs4all.data.synthetic.measurement_modes.MeasurementModeSimulator method) (nirs4all.data.synthetic.MeasurementModeSimulator method) AcceleratedArrays (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.accelerated) AcceleratedGenerator (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.accelerated) AcceleratorBackend (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.accelerated) actual_columns (nirs4all.controllers.models.stacking.exceptions.FeatureOrderMismatchError attribute) (nirs4all.controllers.models.stacking.FeatureOrderMismatchError attribute) actual_level_ (nirs4all.operators.transforms.nirs.WaveletFeatures attribute) (nirs4all.operators.transforms.nirs.WaveletPCA attribute) (nirs4all.operators.transforms.nirs.WaveletSVD attribute) (nirs4all.operators.transforms.WaveletFeatures attribute) (nirs4all.operators.transforms.WaveletPCA attribute) (nirs4all.operators.transforms.WaveletSVD attribute) adc_bits (nirs4all.data.synthetic.detectors.NoiseModelConfig attribute), [1] (nirs4all.data.synthetic.NoiseModelConfig attribute), [1] add() (nirs4all.data.schema.validation.DiagnosticReport method) (nirs4all.data.schema.validation.error_codes.DiagnosticReport method) add_artifact() (nirs4all.pipeline.StepArtifacts method) (nirs4all.pipeline.trace.execution_trace.StepArtifacts method) (nirs4all.pipeline.trace.StepArtifacts method) add_artifacts_commands() (in module nirs4all.cli.commands.artifacts) add_column() (nirs4all.data.metadata.Metadata method) add_component() (nirs4all.data.synthetic.ComponentLibrary method) (nirs4all.data.synthetic.components.ComponentLibrary method) add_config_commands() (in module nirs4all.cli.commands.config) add_dataset_commands() (in module nirs4all.cli.commands.dataset) add_dependencies() (nirs4all.pipeline.storage.artifacts.artifact_registry.DependencyGraph method) (nirs4all.pipeline.storage.artifacts.DependencyGraph method) add_dependency() (nirs4all.pipeline.storage.artifacts.artifact_registry.DependencyGraph method) (nirs4all.pipeline.storage.artifacts.DependencyGraph method) add_error() (nirs4all.controllers.models.stacking.branch_validator.BranchValidationResult method) (nirs4all.controllers.models.stacking.BranchValidationResult method) (nirs4all.controllers.models.stacking.crossbranch.CrossBranchValidationResult method) (nirs4all.controllers.models.stacking.CrossBranchValidationResult method) (nirs4all.controllers.models.stacking.LevelValidationResult method) (nirs4all.controllers.models.stacking.multilevel.LevelValidationResult method) (nirs4all.controllers.models.stacking.reconstructor.ValidationResult method) (nirs4all.controllers.models.stacking.ValidationResult method) (nirs4all.controllers.models.ValidationResult method) (nirs4all.data.schema.validation.DiagnosticReport method) (nirs4all.data.schema.validation.error_codes.DiagnosticReport method) (nirs4all.pipeline.config.generator.ValidationResult method) add_feature (nirs4all.pipeline.config.context.StepMetadata attribute), [1] (nirs4all.pipeline.config.StepMetadata attribute), [1] add_features() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.SpectroDataset method) add_filter_result() (nirs4all.operators.filters.FilteringReport method) (nirs4all.operators.filters.report.FilteringReport method) add_fold_artifact() (nirs4all.pipeline.StepArtifacts method) (nirs4all.pipeline.trace.execution_trace.StepArtifacts method) (nirs4all.pipeline.trace.StepArtifacts method) add_heatmap_annotations() (nirs4all.visualization.chart_utils.annotator.ChartAnnotator method) (nirs4all.visualization.chart_utils.ChartAnnotator method) add_merged_features() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.SpectroDataset method) add_metadata() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.metadata.Metadata method) (nirs4all.data.SpectroDataset method) add_metadata_column() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.SpectroDataset method) add_output_chain() (nirs4all.pipeline.ExecutionStep method) (nirs4all.pipeline.trace.execution_trace.ExecutionStep method) (nirs4all.pipeline.trace.ExecutionStep method) add_prediction() (nirs4all.data.Predictions method) (nirs4all.data.predictions.Predictions method) add_predictions() (nirs4all.data.Predictions method) (nirs4all.data.predictions.Predictions method) add_processed_targets() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.SpectroDataset method) (nirs4all.data.targets.Targets method) add_processings() (nirs4all.data.indexer.Indexer method) add_random_component() (nirs4all.data.synthetic.ComponentLibrary method) (nirs4all.data.synthetic.components.ComponentLibrary method) add_rows() (nirs4all.data.indexer.Indexer method) add_rows_dict() (nirs4all.data.indexer.Indexer method) add_samples() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.features.Features method) (nirs4all.data.FeatureSource method) (nirs4all.data.indexer.Indexer method) (nirs4all.data.SpectroDataset method) add_samples_batch() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.SpectroDataset method) add_samples_batch_3d() (nirs4all.data.features.Features method) (nirs4all.data.FeatureSource method) add_samples_dict() (nirs4all.data.indexer.Indexer method) add_specular (nirs4all.data.synthetic.measurement_modes.MeasurementModeConfig attribute), [1] add_statistics_box() (nirs4all.visualization.chart_utils.annotator.ChartAnnotator method) (nirs4all.visualization.chart_utils.ChartAnnotator method) add_step() (nirs4all.pipeline.ExecutionTrace method) (nirs4all.pipeline.trace.execution_trace.ExecutionTrace method) (nirs4all.pipeline.trace.ExecutionTrace method) add_step_metadata() (nirs4all.pipeline.trace.recorder.TraceRecorder method) (nirs4all.pipeline.trace.TraceRecorder method) (nirs4all.pipeline.TraceRecorder method) add_stitch_artifacts (nirs4all.data.synthetic.instruments.MultiSensorConfig attribute), [1] (nirs4all.data.synthetic.MultiSensorConfig attribute), [1] add_targets() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.SpectroDataset method) (nirs4all.data.targets.Targets method) add_warning() (nirs4all.controllers.models.stacking.branch_validator.BranchValidationResult method) (nirs4all.controllers.models.stacking.BranchValidationResult method) (nirs4all.controllers.models.stacking.crossbranch.CrossBranchValidationResult method) (nirs4all.controllers.models.stacking.CrossBranchValidationResult method) (nirs4all.controllers.models.stacking.LevelValidationResult method) (nirs4all.controllers.models.stacking.multilevel.LevelValidationResult method) (nirs4all.controllers.models.stacking.reconstructor.ValidationResult method) (nirs4all.controllers.models.stacking.ValidationResult method) (nirs4all.controllers.models.ValidationResult method) add_workspace_commands() (in module nirs4all.cli.commands.workspace) added (nirs4all.data.serialization.serializer.ConfigDiff attribute), [1] additional_columns (nirs4all.data.synthetic.config.MetadataConfig attribute), [1] (nirs4all.data.synthetic.metadata.MetadataGenerationResult attribute), [1] (nirs4all.data.synthetic.MetadataConfig attribute), [1] (nirs4all.data.synthetic.MetadataGenerationResult attribute), [1] additional_params (nirs4all.data.synthetic.DomainConfig attribute), [1] (nirs4all.data.synthetic.domains.DomainConfig attribute), [1] additive_scatter_std (nirs4all.data.synthetic.EMSCConfig attribute), [1] (nirs4all.data.synthetic.fitter.ScatteringInference attribute), [1] (nirs4all.data.synthetic.scattering.EMSCConfig attribute), [1] (nirs4all.data.synthetic.ScatteringInference attribute), [1] ADVERSARIAL_AUC (nirs4all.data.synthetic.RealismMetric attribute) adversarial_auc (nirs4all.data.synthetic.SpectralRealismScore attribute), [1] ADVERSARIAL_AUC (nirs4all.data.synthetic.validation.RealismMetric attribute) adversarial_auc (nirs4all.data.synthetic.validation.SpectralRealismScore attribute), [1] affected_models (nirs4all.controllers.models.stacking.exceptions.FoldMismatchAcrossBranchesError attribute) (nirs4all.controllers.models.stacking.FoldMismatchAcrossBranchesError attribute) aggregate (nirs4all.data.dataset.SpectroDataset property) (nirs4all.data.DatasetConfigSchema attribute) (nirs4all.data.schema.config.DatasetConfigSchema attribute) (nirs4all.data.schema.DatasetConfigSchema attribute) (nirs4all.data.SpectroDataset property) (nirs4all.operators.data.BranchPredictionConfig attribute), [1] (nirs4all.operators.data.merge.BranchPredictionConfig attribute), [1] aggregate() (nirs4all.controllers.data.merge.PredictionAggregator static method) (nirs4all.controllers.shared.prediction_aggregator.PredictionAggregator static method) (nirs4all.controllers.shared.PredictionAggregator static method) (nirs4all.data.aggregation.Aggregator method) (nirs4all.data.aggregation.aggregator.Aggregator method) (nirs4all.data.Predictions static method) (nirs4all.data.predictions.Predictions static method) (nirs4all.visualization.chart_utils.aggregator.DataAggregator static method) (nirs4all.visualization.chart_utils.DataAggregator static method) aggregate_column (nirs4all.pipeline.config.context.ExecutionContext attribute) (nirs4all.pipeline.config.ExecutionContext attribute) aggregate_data() (in module nirs4all.data.aggregation) (in module nirs4all.data.aggregation.aggregator) aggregate_exclude_outliers (nirs4all.data.dataset.SpectroDataset property) (nirs4all.data.DatasetConfigSchema attribute) (nirs4all.data.schema.config.DatasetConfigSchema attribute) (nirs4all.data.schema.DatasetConfigSchema attribute) (nirs4all.data.SpectroDataset property) aggregate_folds() (nirs4all.controllers.data.merge.PredictionAggregator static method) (nirs4all.controllers.shared.prediction_aggregator.PredictionAggregator static method) (nirs4all.controllers.shared.PredictionAggregator static method) aggregate_importance_by_model() (nirs4all.controllers.models.stacking.classification.MetaFeatureInfo method) (nirs4all.controllers.models.stacking.MetaFeatureInfo method) aggregate_metadata (nirs4all.operators.data.repetition.RepetitionConfig attribute), [1] (nirs4all.operators.data.RepetitionConfig attribute), [1] aggregate_method (nirs4all.data.dataset.SpectroDataset property) (nirs4all.data.DatasetConfigSchema attribute) (nirs4all.data.schema.config.DatasetConfigSchema attribute) (nirs4all.data.schema.DatasetConfigSchema attribute) (nirs4all.data.SpectroDataset property) aggregate_outlier_threshold (nirs4all.data.dataset.SpectroDataset property) (nirs4all.data.SpectroDataset property) AggregateMethod (class in nirs4all.data.schema) (class in nirs4all.data.schema.config) AGGREGATION (nirs4all.data.schema.validation.error_codes.ErrorCategory attribute) (nirs4all.data.schema.validation.ErrorCategory attribute) AggregationConfig (class in nirs4all.data.aggregation) (class in nirs4all.data.aggregation.aggregator) AggregationError AggregationMethod (class in nirs4all.data.aggregation) (class in nirs4all.data.aggregation.aggregator) AggregationStrategy (class in nirs4all.operators.data) (class in nirs4all.operators.data.merge) Aggregator (class in nirs4all.data.aggregation) (class in nirs4all.data.aggregation.aggregator) AGRICULTURE (nirs4all.data.synthetic.BenchmarkDomain attribute) (nirs4all.data.synthetic.benchmarks.BenchmarkDomain attribute) (nirs4all.data.synthetic.DomainCategory attribute) (nirs4all.data.synthetic.domains.DomainCategory attribute) AirPLS (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.nirs) align_branch_features() (nirs4all.controllers.models.stacking.crossbranch.CrossBranchValidator method) (nirs4all.controllers.models.stacking.CrossBranchValidator method) alignment_issues (nirs4all.controllers.models.stacking.BranchFeatureAlignmentError attribute) (nirs4all.controllers.models.stacking.crossbranch.CrossBranchValidationResult attribute), [1] (nirs4all.controllers.models.stacking.CrossBranchValidationResult attribute), [1] (nirs4all.controllers.models.stacking.exceptions.BranchFeatureAlignmentError attribute) ALL (nirs4all.operators.data.merge.MergeMode attribute), [1] (nirs4all.operators.data.merge.SelectionStrategy attribute), [1] (nirs4all.operators.data.MergeMode attribute), [1] (nirs4all.operators.data.SelectionStrategy attribute), [1] ALL_BRANCHES (nirs4all.operators.models.BranchScope attribute), [1] (nirs4all.operators.models.meta.BranchScope attribute), [1] all_codes() (nirs4all.data.schema.validation.error_codes.ErrorRegistry class method) (nirs4all.data.schema.validation.ErrorRegistry class method) all_missing (nirs4all.controllers.models.stacking.exceptions.MissingSourceModelError attribute) (nirs4all.controllers.models.stacking.MissingSourceModelError attribute) ALLOW (nirs4all.operators.data.merge.ShapeMismatchStrategy attribute), [1] (nirs4all.operators.data.ShapeMismatchStrategy attribute), [1] allow_meta_sources (nirs4all.operators.models.meta.StackingConfig attribute), [1] (nirs4all.operators.models.StackingConfig attribute), [1] allow_no_cv (nirs4all.operators.models.meta.StackingConfig attribute), [1] (nirs4all.operators.models.StackingConfig attribute), [1] allow_partial_sources (nirs4all.controllers.models.ReconstructorConfig attribute), [1] (nirs4all.controllers.models.stacking.config.ReconstructorConfig attribute), [1] (nirs4all.controllers.models.stacking.ReconstructorConfig attribute), [1] AllPreviousModelsSelector (class in nirs4all.operators.models) (class in nirs4all.operators.models.selection) alpha (nirs4all.visualization.charts.ChartConfig attribute), [1] (nirs4all.visualization.charts.config.ChartConfig attribute), [1] alternative_archetypes (nirs4all.data.synthetic.fitter.InstrumentInference attribute), [1] (nirs4all.data.synthetic.InstrumentInference attribute), [1] alternative_domains (nirs4all.data.synthetic.DomainInference attribute), [1] (nirs4all.data.synthetic.fitter.DomainInference attribute), [1] AMINE (nirs4all.data.synthetic.FunctionalGroupType attribute) (nirs4all.data.synthetic.procedural.FunctionalGroupType attribute) amplitude (nirs4all.data.synthetic.components.NIRBand attribute), [1] (nirs4all.data.synthetic.NIRBand attribute), [1] amplitude_factor (nirs4all.data.synthetic.CombinationBandResult attribute) (nirs4all.data.synthetic.OvertoneResult attribute) (nirs4all.data.synthetic.wavenumber.CombinationBandResult attribute) (nirs4all.data.synthetic.wavenumber.OvertoneResult attribute) amplitude_variability (nirs4all.data.synthetic.procedural.ProceduralComponentConfig attribute), [1] (nirs4all.data.synthetic.ProceduralComponentConfig attribute), [1] analyze_all() (nirs4all.controllers.data.merge.AsymmetricBranchAnalyzer method) analyze_branch() (nirs4all.controllers.data.merge.AsymmetricBranchAnalyzer method) analyzer (nirs4all.visualization.charts.base.BaseChart attribute) (nirs4all.visualization.charts.BaseChart attribute) anharmonicity (nirs4all.data.synthetic.procedural.ProceduralComponentConfig attribute), [1] (nirs4all.data.synthetic.ProceduralComponentConfig attribute), [1] anharmonicity_variability (nirs4all.data.synthetic.procedural.ProceduralComponentConfig attribute), [1] (nirs4all.data.synthetic.ProceduralComponentConfig attribute), [1] annotation_fontsize (nirs4all.visualization.charts.ChartConfig attribute), [1] (nirs4all.visualization.charts.config.ChartConfig attribute), [1] AOTF (nirs4all.data.synthetic.instruments.MonochromatorType attribute) (nirs4all.data.synthetic.MonochromatorType attribute) append() (nirs4all.pipeline.storage.artifacts.operator_chain.OperatorChain method) (nirs4all.pipeline.storage.artifacts.OperatorChain method) append_artifacts() (nirs4all.pipeline.storage.manifest_manager.ManifestManager method) (nirs4all.pipeline.storage.ManifestManager method) append_artifacts_v2() (nirs4all.pipeline.storage.manifest_manager.ManifestManager method) (nirs4all.pipeline.storage.ManifestManager method) append_prediction() (nirs4all.pipeline.storage.manifest_manager.ManifestManager method) (nirs4all.pipeline.storage.ManifestManager method) apply() (nirs4all.data.synthetic.detectors.DetectorSimulator method) (nirs4all.data.synthetic.DetectorSimulator method) (nirs4all.data.synthetic.EMSCTransformSimulator method) (nirs4all.data.synthetic.environmental.EnvironmentalEffectsSimulator method) (nirs4all.data.synthetic.environmental.MoistureEffectSimulator method) (nirs4all.data.synthetic.environmental.TemperatureEffectSimulator method) (nirs4all.data.synthetic.EnvironmentalEffectsSimulator method) (nirs4all.data.synthetic.instruments.InstrumentSimulator method) (nirs4all.data.synthetic.InstrumentSimulator method) (nirs4all.data.synthetic.measurement_modes.MeasurementModeSimulator method) (nirs4all.data.synthetic.MeasurementModeSimulator method) (nirs4all.data.synthetic.MoistureEffectSimulator method) (nirs4all.data.synthetic.ParticleSizeSimulator method) (nirs4all.data.synthetic.scattering.EMSCTransformSimulator method) (nirs4all.data.synthetic.scattering.ParticleSizeSimulator method) (nirs4all.data.synthetic.scattering.ScatteringEffectsSimulator method) (nirs4all.data.synthetic.ScatteringEffectsSimulator method) (nirs4all.data.synthetic.TemperatureEffectSimulator method)

apply_all_constraints() (in module nirs4all.pipeline.config.generator) apply_augmentation() (in module nirs4all.analysis) (in module nirs4all.analysis.transfer_utils) apply_emsc_distortion() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.scattering) apply_exclude_constraint() (in module nirs4all.pipeline.config.generator) apply_font_settings() (nirs4all.visualization.charts.ChartConfig method) (nirs4all.visualization.charts.config.ChartConfig method) apply_hydrogen_bonding_shift() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.wavenumber) apply_moisture_effects() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.environmental) apply_mutex_constraint() (in module nirs4all.pipeline.config.generator) apply_nonlinearity (nirs4all.data.synthetic.DetectorConfig attribute), [1] (nirs4all.data.synthetic.detectors.DetectorConfig attribute), [1] apply_particle_size_effects() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.scattering) apply_pipeline() (in module nirs4all.analysis) (in module nirs4all.analysis.transfer_utils) apply_preprocessing_objects() (in module nirs4all.analysis) (in module nirs4all.analysis.transfer_utils) apply_random_transformer_selection() (nirs4all.controllers.data.balancing.BalancingCalculator static method) apply_requires_constraint() (in module nirs4all.pipeline.config.generator) apply_response_curve (nirs4all.data.synthetic.DetectorConfig attribute), [1] (nirs4all.data.synthetic.detectors.DetectorConfig attribute), [1] apply_single_preprocessing() (in module nirs4all.analysis) (in module nirs4all.analysis.transfer_utils) apply_stacked_pipeline() (in module nirs4all.analysis) (in module nirs4all.analysis.transfer_utils) apply_temperature_effects() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.environmental) apply_x_axis_limits() (in module nirs4all.utils) (in module nirs4all.utils.header_units) arange (nirs4all.data.synthetic.accelerated.AcceleratedArrays attribute) (nirs4all.data.synthetic.AcceleratedArrays attribute) archetype (nirs4all.data.synthetic.instruments.InstrumentSimulator attribute) (nirs4all.data.synthetic.InstrumentSimulator attribute) archetype_name (nirs4all.data.synthetic.fitter.InstrumentInference attribute), [1] (nirs4all.data.synthetic.InstrumentInference attribute), [1] archive_to_catalog() (nirs4all.data.Predictions method) (nirs4all.data.predictions.Predictions method) ArchiveHandler (class in nirs4all.data.loaders) (class in nirs4all.data.loaders.base) AreaNormalization (class in nirs4all.operators.transforms.nirs) AROMATIC_CH (nirs4all.data.synthetic.FunctionalGroupType attribute) (nirs4all.data.synthetic.procedural.FunctionalGroupType attribute) ArPLS (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.nirs) array (nirs4all.data.synthetic.accelerated.AcceleratedArrays attribute) (nirs4all.data.synthetic.AcceleratedArrays attribute) arrow (nirs4all.core.logging.formatters.Symbols property) (nirs4all.core.logging.Symbols property) ARTIFACT (nirs4all.core.logging.events.EventType attribute) (nirs4all.core.logging.EventType attribute) artifact() (nirs4all.core.logging.config.Nirs4allLogger method) (nirs4all.core.logging.Nirs4allLogger method) artifact_cache (nirs4all.pipeline.bundle.loader.BundleArtifactProvider attribute) artifact_exists() (nirs4all.pipeline.storage.manifest_manager.ManifestManager method) (nirs4all.pipeline.storage.ManifestManager method) artifact_id (nirs4all.controllers.models.stacking.exceptions.InvalidMetaModelArtifactError attribute) (nirs4all.controllers.models.stacking.InvalidMetaModelArtifactError attribute) (nirs4all.controllers.models.stacking.MetaModelArtifact attribute), [1] (nirs4all.controllers.models.stacking.serialization.MetaModelArtifact attribute), [1] (nirs4all.controllers.models.stacking.serialization.SourceModelReference attribute), [1] (nirs4all.controllers.models.stacking.SourceModelReference attribute), [1] ARTIFACT_ID (nirs4all.pipeline.resolver.SourceType attribute), [1] artifact_id (nirs4all.pipeline.retrainer.StepMode attribute), [1] ARTIFACT_ID (nirs4all.pipeline.SourceType attribute), [1] artifact_id (nirs4all.pipeline.StepMode attribute), [1] (nirs4all.pipeline.storage.artifacts.ArtifactRecord attribute), [1] (nirs4all.pipeline.storage.artifacts.types.ArtifactRecord attribute), [1] artifact_id_matches_context() (in module nirs4all.pipeline.storage.artifacts) (in module nirs4all.pipeline.storage.artifacts.utils) artifact_ids (nirs4all.pipeline.StepArtifacts attribute), [1] (nirs4all.pipeline.trace.execution_trace.StepArtifacts attribute), [1] (nirs4all.pipeline.trace.StepArtifacts attribute), [1] artifact_index (nirs4all.pipeline.bundle.loader.BundleArtifactProvider attribute) artifact_intensity (nirs4all.data.synthetic.instruments.MultiSensorConfig attribute), [1] (nirs4all.data.synthetic.MultiSensorConfig attribute), [1] artifact_load_counter (nirs4all.pipeline.config.context.RuntimeContext attribute) (nirs4all.pipeline.config.RuntimeContext attribute) artifact_loader (nirs4all.pipeline.config.context.RuntimeContext attribute), [1] (nirs4all.pipeline.config.RuntimeContext attribute), [1] (nirs4all.pipeline.Explainer attribute) (nirs4all.pipeline.explainer.Explainer attribute) (nirs4all.pipeline.minimal_predictor.MinimalArtifactProvider attribute) (nirs4all.pipeline.minimal_predictor.MinimalPredictor attribute) (nirs4all.pipeline.MinimalArtifactProvider attribute) (nirs4all.pipeline.MinimalPredictor attribute) (nirs4all.pipeline.Predictor attribute) (nirs4all.pipeline.predictor.Predictor attribute) artifact_map (nirs4all.pipeline.config.context.MapArtifactProvider attribute) (nirs4all.pipeline.config.MapArtifactProvider attribute) (nirs4all.pipeline.MapArtifactProvider attribute) (nirs4all.pipeline.MinimalPipeline attribute), [1] (nirs4all.pipeline.trace.extractor.MinimalPipeline attribute), [1] (nirs4all.pipeline.trace.MinimalPipeline attribute), [1] artifact_provider (nirs4all.pipeline.bundle.BundleLoader attribute) (nirs4all.pipeline.bundle.loader.BundleLoader attribute) (nirs4all.pipeline.BundleLoader attribute) (nirs4all.pipeline.config.context.RuntimeContext attribute), [1] (nirs4all.pipeline.config.RuntimeContext attribute), [1] (nirs4all.pipeline.ExtractedPipeline attribute), [1] (nirs4all.pipeline.ResolvedPrediction attribute), [1] (nirs4all.pipeline.resolver.ResolvedPrediction attribute), [1] (nirs4all.pipeline.retrainer.ExtractedPipeline attribute), [1] artifact_registry (nirs4all.pipeline.config.context.RuntimeContext attribute), [1] (nirs4all.pipeline.config.RuntimeContext attribute), [1] (nirs4all.pipeline.execution.builder.ExecutorBuilder property) (nirs4all.pipeline.execution.executor.PipelineExecutor attribute) (nirs4all.pipeline.execution.ExecutorBuilder property) (nirs4all.pipeline.execution.PipelineExecutor attribute) artifact_type (nirs4all.pipeline.storage.artifacts.ArtifactRecord attribute), [1] (nirs4all.pipeline.storage.artifacts.types.ArtifactRecord attribute), [1] ArtifactLoader (class in nirs4all.pipeline.storage.artifacts) (class in nirs4all.pipeline.storage.artifacts.artifact_loader) ArtifactMeta (class in nirs4all.pipeline.execution) (class in nirs4all.pipeline.execution.result) (class in nirs4all.pipeline.storage.artifacts.artifact_persistence) ArtifactProvider (class in nirs4all.pipeline) (class in nirs4all.pipeline.config) (class in nirs4all.pipeline.config.context) ArtifactRecord (class in nirs4all.pipeline.storage.artifacts) (class in nirs4all.pipeline.storage.artifacts.types) ArtifactRegistry (class in nirs4all.pipeline.storage.artifacts) (class in nirs4all.pipeline.storage.artifacts.artifact_registry) artifacts (nirs4all.pipeline.execution.result.StepOutput attribute), [1] (nirs4all.pipeline.execution.result.StepResult attribute), [1] (nirs4all.pipeline.execution.StepResult attribute), [1] (nirs4all.pipeline.ExecutionStep attribute), [1] (nirs4all.pipeline.MinimalPipelineStep attribute), [1] (nirs4all.pipeline.trace.execution_trace.ExecutionStep attribute), [1] (nirs4all.pipeline.trace.ExecutionStep attribute), [1] (nirs4all.pipeline.trace.extractor.MinimalPipelineStep attribute), [1] (nirs4all.pipeline.trace.MinimalPipelineStep attribute), [1] artifacts_cleanup() (in module nirs4all.cli.commands.artifacts) artifacts_list_orphaned() (in module nirs4all.cli.commands.artifacts) artifacts_path (nirs4all.api.result.RunResult property) (nirs4all.api.RunResult property) (nirs4all.RunResult property) artifacts_purge() (in module nirs4all.cli.commands.artifacts) artifacts_stats() (in module nirs4all.cli.commands.artifacts) ArtifactType (class in nirs4all.pipeline.storage.artifacts) (class in nirs4all.pipeline.storage.artifacts.types) as_dataset (nirs4all.data.synthetic.builder.BuilderState attribute) (nirs4all.data.synthetic.config.OutputConfig attribute), [1] (nirs4all.data.synthetic.OutputConfig attribute), [1] as_fragmented() (nirs4all.data.synthetic.CSVVariationGenerator method) (nirs4all.data.synthetic.exporter.CSVVariationGenerator method) as_single_file() (nirs4all.data.synthetic.CSVVariationGenerator method) (nirs4all.data.synthetic.exporter.CSVVariationGenerator method) ascending (nirs4all.operators.models.selection.TopKByMetricSelector attribute) (nirs4all.operators.models.TopKByMetricSelector attribute) asls_baseline() (in module nirs4all.operators.transforms) (in module nirs4all.operators.transforms.nirs) ASLSBaseline (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.nirs) assemble() (nirs4all.controllers.models.components.prediction_assembler.PredictionDataAssembler method) (nirs4all.controllers.models.components.PredictionDataAssembler method) assemble_fold_average() (nirs4all.controllers.models.components.prediction_assembler.PredictionDataAssembler method) (nirs4all.controllers.models.components.PredictionDataAssembler method) assign() (nirs4all.data.partition.partition_assigner.PartitionAssigner method) (nirs4all.data.partition.PartitionAssigner method) (nirs4all.data.PartitionAssigner method) (nirs4all.data.RoleAssigner method) (nirs4all.data.selection.role_assigner.RoleAssigner method) (nirs4all.data.selection.RoleAssigner method) assign_auto() (nirs4all.data.RoleAssigner method) (nirs4all.data.selection.role_assigner.RoleAssigner method) (nirs4all.data.selection.RoleAssigner method) AsymmetricBranchAnalyzer (class in nirs4all.controllers.data.merge) AsymmetryReport (class in nirs4all.controllers.data.merge) ATR (nirs4all.data.synthetic.fitter.MeasurementModeInference attribute) (nirs4all.data.synthetic.measurement_modes.MeasurementMode attribute) atr (nirs4all.data.synthetic.measurement_modes.MeasurementModeConfig attribute), [1] ATR (nirs4all.data.synthetic.MeasurementMode attribute) (nirs4all.data.synthetic.MeasurementModeInference attribute) ATRConfig (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.measurement_modes) augment() (nirs4all.operators.Augmenter method) (nirs4all.operators.IdentityAugmenter method) (nirs4all.operators.Random_X_Operation method) (nirs4all.operators.Rotate_Translate method) (nirs4all.operators.Spline_Curve_Simplification method) (nirs4all.operators.Spline_Smoothing method) (nirs4all.operators.Spline_X_Perturbations method) (nirs4all.operators.Spline_X_Simplification method) (nirs4all.operators.Spline_Y_Perturbations method) (nirs4all.operators.transforms.Augmenter method) (nirs4all.operators.transforms.BandMasking method) (nirs4all.operators.transforms.BandPerturbation method) (nirs4all.operators.transforms.ChannelDropout method) (nirs4all.operators.transforms.GaussianAdditiveNoise method) (nirs4all.operators.transforms.GaussianSmoothingJitter method) (nirs4all.operators.transforms.IdentityAugmenter method) (nirs4all.operators.transforms.LinearBaselineDrift method) (nirs4all.operators.transforms.LocalClipping method) (nirs4all.operators.transforms.LocalMixupAugmenter method) (nirs4all.operators.transforms.LocalWavelengthWarp method) (nirs4all.operators.transforms.MixupAugmenter method) (nirs4all.operators.transforms.MultiplicativeNoise method) (nirs4all.operators.transforms.PolynomialBaselineDrift method) (nirs4all.operators.transforms.Random_X_Operation method) (nirs4all.operators.transforms.Rotate_Translate method) (nirs4all.operators.transforms.ScatterSimulationMSC method) (nirs4all.operators.transforms.SmoothMagnitudeWarp method) (nirs4all.operators.transforms.SpikeNoise method) (nirs4all.operators.transforms.Spline_Curve_Simplification method) (nirs4all.operators.transforms.Spline_Smoothing method) (nirs4all.operators.transforms.Spline_X_Perturbations method) (nirs4all.operators.transforms.Spline_X_Simplification method) (nirs4all.operators.transforms.Spline_Y_Perturbations method) (nirs4all.operators.transforms.UnsharpSpectralMask method) (nirs4all.operators.transforms.WavelengthShift method) (nirs4all.operators.transforms.WavelengthStretch method) augment_rows() (nirs4all.data.indexer.Indexer method) augment_sample (nirs4all.pipeline.config.context.StepMetadata attribute), [1] (nirs4all.pipeline.config.StepMetadata attribute), [1] augment_samples() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.features.Features method) (nirs4all.data.FeatureSource method) (nirs4all.data.SpectroDataset method) AugmentationChartController (class in nirs4all.controllers) (class in nirs4all.controllers.charts.augmentation) Augmenter (class in nirs4all.operators) (class in nirs4all.operators.transforms) AUTO (nirs4all.data.schema.CategoricalMode attribute) (nirs4all.data.schema.config.CategoricalMode attribute) (nirs4all.data.schema.config.NAPolicy attribute) (nirs4all.data.schema.config.SignalTypeEnum attribute) (nirs4all.data.schema.config.TaskType attribute) (nirs4all.data.schema.NAPolicy attribute) (nirs4all.data.schema.SignalTypeEnum attribute) (nirs4all.data.schema.TaskType attribute) (nirs4all.data.signal_type.SignalType attribute) (nirs4all.data.SignalType attribute) (nirs4all.data.TaskType attribute) (nirs4all.operators.models.meta.StackingLevel attribute), [1] (nirs4all.operators.models.StackingLevel attribute), [1] AutoDetector (class in nirs4all.data.detection) (class in nirs4all.data.detection.detector) AutoGluonModelController (class in nirs4all.controllers.models) (class in nirs4all.controllers.models.autogluon_model) AutoTransferPreprocessingController (class in nirs4all.controllers) (class in nirs4all.controllers.data) (class in nirs4all.controllers.data.auto_transfer_preproc) AVERAGE (nirs4all.pipeline.FoldStrategy attribute), [1] (nirs4all.pipeline.resolver.FoldStrategy attribute), [1] averaging_method (nirs4all.data.synthetic.instruments.MultiScanConfig attribute), [1] (nirs4all.data.synthetic.MultiScanConfig attribute), [1]

B

B_ (nirs4all.operators.models.OKLMPLS attribute) (nirs4all.operators.models.sklearn.OKLMPLS attribute) (nirs4all.operators.models.sklearn.oklmpls.OKLMPLS attribute) backend (nirs4all.data.synthetic.accelerated.AcceleratedArrays attribute) (nirs4all.data.synthetic.AcceleratedArrays attribute) BackendNotAvailableError, [1] BalancingCalculator (class in nirs4all.controllers.data.balancing) band_type (nirs4all.data.synthetic.CombinationBandResult attribute) (nirs4all.data.synthetic.wavenumber.CombinationBandResult attribute) BandMasking (class in nirs4all.operators.transforms) BandPerturbation (class in nirs4all.operators.transforms) bands (nirs4all.data.synthetic.components.SpectralComponent attribute), [1] (nirs4all.data.synthetic.SpectralComponent attribute), [1] bandwidth_factor (nirs4all.data.synthetic.OvertoneResult attribute) (nirs4all.data.synthetic.wavenumber.OvertoneResult attribute) bandwidth_variability (nirs4all.data.synthetic.procedural.ProceduralComponentConfig attribute), [1] (nirs4all.data.synthetic.ProceduralComponentConfig attribute), [1] bar_width (nirs4all.core.logging.progress.ProgressConfig attribute), [1] (nirs4all.core.logging.ProgressConfig attribute), [1] base_exporter (nirs4all.data.synthetic.CSVVariationGenerator attribute) (nirs4all.data.synthetic.exporter.CSVVariationGenerator attribute) base_provider (nirs4all.pipeline.RetrainArtifactProvider attribute) (nirs4all.pipeline.retrainer.RetrainArtifactProvider attribute) base_value (nirs4all.api.ExplainResult attribute), [1] (nirs4all.api.result.ExplainResult attribute), [1] (nirs4all.ExplainResult attribute), [1] BaseChart (class in nirs4all.visualization.charts) (class in nirs4all.visualization.charts.base) BaseController (class in nirs4all.controllers) (class in nirs4all.controllers.base) Baseline (class in nirs4all.operators) (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.signal) baseline() (in module nirs4all.operators) (in module nirs4all.operators.transforms) (in module nirs4all.operators.transforms.signal) baseline_amplitude (nirs4all.data.synthetic.FittedParameters attribute), [1] (nirs4all.data.synthetic.fitter.FittedParameters attribute), [1] baseline_convexity (nirs4all.data.synthetic.fitter.SpectralProperties attribute), [1] (nirs4all.data.synthetic.SpectralProperties attribute), [1] baseline_curvature (nirs4all.data.synthetic.fitter.ScatteringInference attribute), [1] BASELINE_CURVATURE (nirs4all.data.synthetic.RealismMetric attribute) baseline_curvature (nirs4all.data.synthetic.ScatteringInference attribute), [1] BASELINE_CURVATURE (nirs4all.data.synthetic.validation.RealismMetric attribute) baseline_curvature_overlap (nirs4all.data.synthetic.SpectralRealismScore attribute), [1] (nirs4all.data.synthetic.validation.SpectralRealismScore attribute), [1] baseline_offset (nirs4all.data.synthetic.fitter.SpectralProperties attribute), [1] (nirs4all.data.synthetic.SpectralProperties attribute), [1] baseline_scattering (nirs4all.data.synthetic.measurement_modes.ScatteringConfig attribute), [1] (nirs4all.data.synthetic.scattering.ScatteringCoefficientConfig attribute), [1] (nirs4all.data.synthetic.ScatteringCoefficientConfig attribute), [1] (nirs4all.data.synthetic.ScatteringConfig attribute), [1] BaseModelController (class in nirs4all.controllers.models) (class in nirs4all.controllers.models.base_model) BaseModelOperator (class in nirs4all.operators.models) (class in nirs4all.operators.models.base) BaseParser (class in nirs4all.data.parsers) (class in nirs4all.data.parsers.base) batch_effects (nirs4all.data.synthetic.config.SyntheticDatasetConfig attribute), [1] (nirs4all.data.synthetic.SyntheticDatasetConfig attribute), [1] batch_effects_enabled (nirs4all.data.synthetic.builder.BuilderState attribute) batch_iter() (in module nirs4all.pipeline.config.generator) BatchEffectConfig (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.config) BEADS (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.nirs) benchmark_backends() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.accelerated) BenchmarkDatasetInfo (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.benchmarks) BenchmarkDomain (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.benchmarks) BENCHTOP (nirs4all.data.synthetic.InstrumentCategory attribute) (nirs4all.data.synthetic.instruments.InstrumentCategory attribute) best (nirs4all.analysis.results.TransferSelectionResults property) (nirs4all.analysis.TransferSelectionResults property) (nirs4all.api.result.RunResult property) (nirs4all.api.RunResult property) BEST (nirs4all.operators.data.merge.SelectionStrategy attribute), [1] (nirs4all.operators.data.SelectionStrategy attribute), [1] best (nirs4all.RunResult property) best_accuracy (nirs4all.api.result.RunResult property) (nirs4all.api.RunResult property) (nirs4all.RunResult property) BEST_FOLD (nirs4all.operators.models.meta.TestAggregation attribute), [1] (nirs4all.operators.models.TestAggregation attribute), [1] best_pipeline (nirs4all.core.logging.EvaluationProgress property) (nirs4all.core.logging.progress.EvaluationProgress property) best_r2 (nirs4all.api.result.RunResult property) (nirs4all.api.RunResult property) (nirs4all.RunResult property) best_rmse (nirs4all.api.result.RunResult property) (nirs4all.api.RunResult property) (nirs4all.RunResult property) best_score (nirs4all.api.result.RunResult property) (nirs4all.api.RunResult property) (nirs4all.core.logging.EvaluationProgress property) (nirs4all.core.logging.progress.EvaluationProgress property) (nirs4all.RunResult property) BEVERAGE (nirs4all.data.synthetic.DomainCategory attribute) (nirs4all.data.synthetic.domains.DomainCategory attribute) bin_continuous_targets() (nirs4all.data.binning.BinningCalculator static method) binaries_dir (nirs4all.pipeline.storage.artifacts.artifact_loader.ArtifactLoader attribute) (nirs4all.pipeline.storage.artifacts.artifact_registry.ArtifactRegistry attribute) (nirs4all.pipeline.storage.artifacts.ArtifactLoader attribute) (nirs4all.pipeline.storage.artifacts.ArtifactRegistry attribute) BINARY_CLASSIFICATION (nirs4all.controllers.models.stacking.classification.StackingTaskType attribute), [1] (nirs4all.controllers.models.stacking.StackingTaskType attribute), [1] (nirs4all.core.task_type.TaskType attribute) (nirs4all.core.TaskType attribute) (nirs4all.data.schema.config.TaskType attribute) (nirs4all.data.schema.TaskType attribute) (nirs4all.data.TaskType attribute) BinnedStratifiedGroupKFold (class in nirs4all.operators.splitters) (class in nirs4all.operators.splitters.splitters) BinningCalculator (class in nirs4all.data.binning) bio_sample_ids (nirs4all.data.synthetic.metadata.MetadataGenerationResult attribute), [1] (nirs4all.data.synthetic.MetadataGenerationResult attribute), [1] BIOMEDICAL (nirs4all.data.synthetic.DomainCategory attribute) (nirs4all.data.synthetic.domains.DomainCategory attribute) bound_water_shift (nirs4all.data.synthetic.environmental.MoistureConfig attribute), [1] (nirs4all.data.synthetic.MoistureConfig attribute), [1] BRANCH (nirs4all.core.logging.events.Phase attribute) branch (nirs4all.core.logging.formatters.Symbols property) BRANCH (nirs4all.core.logging.Phase attribute) branch (nirs4all.core.logging.Symbols property) (nirs4all.operators.data.BranchPredictionConfig attribute), [1] (nirs4all.operators.data.merge.BranchPredictionConfig attribute), [1] branch() (nirs4all.core.logging.context.LogContext static method) (nirs4all.core.logging.LogContext static method) BRANCH_COMPARE (nirs4all.core.logging.events.EventType attribute) (nirs4all.core.logging.EventType attribute) branch_context (nirs4all.controllers.models.stacking.MetaModelArtifact attribute), [1] (nirs4all.controllers.models.stacking.serialization.MetaModelArtifact attribute), [1] branch_depth (nirs4all.controllers.models.stacking.exceptions.NestedBranchStackingError attribute) (nirs4all.controllers.models.stacking.NestedBranchStackingError attribute) (nirs4all.core.logging.context.RunState property) (nirs4all.core.logging.RunState property) BRANCH_ENTER (nirs4all.core.logging.events.EventType attribute) (nirs4all.core.logging.EventType attribute) BRANCH_EXIT (nirs4all.core.logging.events.EventType attribute) (nirs4all.core.logging.EventType attribute) branch_features (nirs4all.controllers.models.stacking.BranchFeatureAlignmentError attribute) (nirs4all.controllers.models.stacking.exceptions.BranchFeatureAlignmentError attribute) branch_id (nirs4all.controllers.data.merge.BranchAnalysisResult attribute), [1] (nirs4all.controllers.models.stacking.branch_validator.BranchInfo attribute) (nirs4all.controllers.models.stacking.BranchInfo attribute) (nirs4all.controllers.models.stacking.BranchPredictionInfo attribute), [1] (nirs4all.controllers.models.stacking.crossbranch.BranchPredictionInfo attribute), [1] (nirs4all.controllers.models.stacking.serialization.SourceModelReference attribute), [1] (nirs4all.controllers.models.stacking.SourceModelReference attribute), [1] (nirs4all.operators.models.ModelCandidate attribute), [1] (nirs4all.operators.models.selection.ModelCandidate attribute), [1] (nirs4all.pipeline.config.context.DataSelector attribute), [1] (nirs4all.pipeline.config.DataSelector attribute), [1] (nirs4all.pipeline.storage.artifacts.artifact_persistence.ArtifactMeta attribute) (nirs4all.visualization.pipeline_diagram.PipelineNode attribute), [1] branch_index (nirs4all.core.logging.events.LogEvent attribute), [1] (nirs4all.core.logging.LogEvent attribute), [1] branch_info (nirs4all.controllers.data.merge.DisjointMergeResult attribute), [1] (nirs4all.controllers.models.stacking.branch_validator.BranchValidationResult attribute) (nirs4all.controllers.models.stacking.BranchValidationResult attribute) branch_item (nirs4all.core.logging.formatters.Symbols property) (nirs4all.core.logging.Symbols property) branch_name (nirs4all.controllers.data.merge.BranchAnalysisResult attribute), [1] (nirs4all.controllers.models.stacking.branch_validator.BranchInfo attribute) (nirs4all.controllers.models.stacking.BranchInfo attribute) (nirs4all.controllers.models.stacking.BranchPredictionInfo attribute), [1] (nirs4all.controllers.models.stacking.crossbranch.BranchPredictionInfo attribute), [1] (nirs4all.controllers.models.stacking.serialization.SourceModelReference attribute), [1] (nirs4all.controllers.models.stacking.SourceModelReference attribute), [1] (nirs4all.core.logging.events.LogEvent attribute), [1] (nirs4all.core.logging.LogEvent attribute), [1] (nirs4all.operators.models.ModelCandidate attribute), [1] (nirs4all.operators.models.selection.ModelCandidate attribute), [1] (nirs4all.pipeline.config.context.DataSelector attribute), [1] (nirs4all.pipeline.config.DataSelector attribute), [1] (nirs4all.pipeline.ExecutionStep attribute), [1] (nirs4all.pipeline.MinimalPipelineStep attribute), [1] (nirs4all.pipeline.storage.artifacts.artifact_persistence.ArtifactMeta attribute) (nirs4all.pipeline.trace.execution_trace.ExecutionStep attribute), [1] (nirs4all.pipeline.trace.ExecutionStep attribute), [1] (nirs4all.pipeline.trace.extractor.MinimalPipelineStep attribute), [1] (nirs4all.pipeline.trace.MinimalPipelineStep attribute), [1] (nirs4all.visualization.pipeline_diagram.PipelineNode attribute), [1]

branch_path (nirs4all.controllers.models.stacking.branch_validator.BranchInfo attribute) (nirs4all.controllers.models.stacking.BranchInfo attribute) (nirs4all.controllers.models.stacking.exceptions.NestedBranchStackingError attribute) (nirs4all.controllers.models.stacking.NestedBranchStackingError attribute) (nirs4all.controllers.models.stacking.serialization.SourceModelReference attribute), [1] (nirs4all.controllers.models.stacking.SourceModelReference attribute), [1] (nirs4all.core.logging.context.RunState property) (nirs4all.core.logging.events.LogEvent attribute), [1] (nirs4all.core.logging.LogEvent attribute), [1] (nirs4all.core.logging.RunState property) (nirs4all.pipeline.config.context.DataSelector attribute), [1] (nirs4all.pipeline.config.DataSelector attribute), [1] (nirs4all.pipeline.ExecutionStep attribute), [1] (nirs4all.pipeline.MinimalPipelineStep attribute), [1] (nirs4all.pipeline.storage.artifacts.ArtifactRecord attribute), [1] (nirs4all.pipeline.storage.artifacts.ExecutionPath attribute), [1] (nirs4all.pipeline.storage.artifacts.operator_chain.OperatorNode attribute), [1] (nirs4all.pipeline.storage.artifacts.OperatorNode attribute), [1] (nirs4all.pipeline.storage.artifacts.types.ArtifactRecord attribute), [1] (nirs4all.pipeline.storage.artifacts.utils.ExecutionPath attribute), [1] (nirs4all.pipeline.trace.execution_trace.ExecutionStep attribute), [1] (nirs4all.pipeline.trace.ExecutionStep attribute), [1] (nirs4all.pipeline.trace.extractor.MinimalPipelineStep attribute), [1] (nirs4all.pipeline.trace.MinimalPipelineStep attribute), [1] branch_sample_counts (nirs4all.controllers.data.merge.DisjointBranchAnalysis attribute), [1] branch_sample_indices (nirs4all.controllers.data.merge.DisjointBranchAnalysis attribute), [1] branch_scope (nirs4all.operators.models.meta.StackingConfig attribute), [1] (nirs4all.operators.models.StackingConfig attribute), [1] branch_sources (nirs4all.core.logging.context.StackContext attribute), [1] (nirs4all.core.logging.StackContext attribute), [1] branch_stack (nirs4all.core.logging.context.RunState attribute), [1] (nirs4all.core.logging.RunState attribute), [1] branch_steps (nirs4all.controllers.data.metadata_partitioner.MetadataPartitionConfig attribute), [1] branch_summary() (nirs4all.data.PredictionAnalyzer method) (nirs4all.visualization.PredictionAnalyzer method) (nirs4all.visualization.predictions.PredictionAnalyzer method) branch_type (nirs4all.controllers.data.merge.DisjointBranchAnalysis attribute), [1] (nirs4all.controllers.models.stacking.branch_validator.BranchInfo attribute) (nirs4all.controllers.models.stacking.BranchInfo attribute) (nirs4all.controllers.models.stacking.BranchPredictionInfo attribute), [1] (nirs4all.controllers.models.stacking.crossbranch.BranchPredictionInfo attribute), [1] (nirs4all.controllers.models.stacking.exceptions.IncompatibleBranchTypeError attribute) (nirs4all.controllers.models.stacking.IncompatibleBranchTypeError attribute) BranchAnalysisResult (class in nirs4all.controllers.data.merge) BranchAnalyzer (class in nirs4all.visualization) (class in nirs4all.visualization.analysis) (class in nirs4all.visualization.analysis.branch) BranchContext (class in nirs4all.core.logging) (class in nirs4all.core.logging.context) BranchController (class in nirs4all.controllers) (class in nirs4all.controllers.data.branch) BranchDiagram (class in nirs4all.visualization) (class in nirs4all.visualization.branch_diagram) (in module nirs4all.visualization.pipeline_diagram) branches (nirs4all.controllers.data.merge.DisjointMergeMetadata attribute), [1] (nirs4all.controllers.models.stacking.crossbranch.CrossBranchValidationResult attribute), [1] (nirs4all.controllers.models.stacking.CrossBranchValidationResult attribute), [1] (nirs4all.controllers.models.stacking.exceptions.IncompatibleBranchSamplesError attribute) (nirs4all.controllers.models.stacking.IncompatibleBranchSamplesError attribute) (nirs4all.operators.data.merge.DisjointMergeMetadata attribute), [1] branches_with_models (nirs4all.controllers.data.merge.AsymmetryReport attribute), [1] branches_without_models (nirs4all.controllers.data.merge.AsymmetryReport attribute), [1] BranchFeatureAlignmentError, [1] BranchInfo (class in nirs4all.controllers.models.stacking) (class in nirs4all.controllers.models.stacking.branch_validator) BranchingError, [1] BranchMismatchError, [1] BranchPredictionConfig (class in nirs4all.operators.data) (class in nirs4all.operators.data.merge) BranchPredictionInfo (class in nirs4all.controllers.models.stacking) (class in nirs4all.controllers.models.stacking.crossbranch) BranchScope (class in nirs4all.operators.models) (class in nirs4all.operators.models.meta) BranchSummary (class in nirs4all.visualization) (class in nirs4all.visualization.analysis) (class in nirs4all.visualization.analysis.branch) BranchType (class in nirs4all.controllers.models.stacking) (class in nirs4all.controllers.models.stacking.branch_validator) (class in nirs4all.operators.data) (class in nirs4all.operators.data.merge) BranchValidationResult (class in nirs4all.controllers.models.stacking) (class in nirs4all.controllers.models.stacking.branch_validator) BranchValidator (class in nirs4all.controllers.models.stacking) (class in nirs4all.controllers.models.stacking.branch_validator) broadening_per_degree (nirs4all.data.synthetic.environmental.TemperatureEffectParams attribute), [1] (nirs4all.data.synthetic.TemperatureEffectParams attribute), [1] browse_folder() (in module nirs4all.data.config_parser) BufferedHandler (class in nirs4all.core.logging) (class in nirs4all.core.logging.handlers) BUILD (nirs4all.core.logging.events.EventType attribute) (nirs4all.core.logging.EventType attribute) build() (nirs4all.data.synthetic.builder.SyntheticDatasetBuilder method) (nirs4all.data.synthetic.SyntheticDatasetBuilder method) (nirs4all.pipeline.execution.builder.ExecutorBuilder method) (nirs4all.pipeline.execution.ExecutorBuilder method) build_arrays() (nirs4all.data.synthetic.builder.SyntheticDatasetBuilder method) (nirs4all.data.synthetic.SyntheticDatasetBuilder method) build_artifact() (nirs4all.controllers.models.stacking.MetaModelSerializer method) (nirs4all.controllers.models.stacking.serialization.MetaModelSerializer method) build_chain_for_artifact() (nirs4all.pipeline.trace.recorder.TraceRecorder method) (nirs4all.pipeline.trace.TraceRecorder method) (nirs4all.pipeline.TraceRecorder method) build_config_from_meta_model() (nirs4all.controllers.data.merge.MergeController class method) (nirs4all.controllers.data.MergeController class method) build_dataset() (nirs4all.data.synthetic.builder.SyntheticDatasetBuilder method) (nirs4all.data.synthetic.SyntheticDatasetBuilder method) build_matrices() (nirs4all.visualization.chart_utils.matrix_builder.MatrixBuilder static method) (nirs4all.visualization.chart_utils.MatrixBuilder static method) build_meta_feature_info() (in module nirs4all.controllers.models.stacking) (in module nirs4all.controllers.models.stacking.classification) build_score_dict() (nirs4all.visualization.chart_utils.matrix_builder.MatrixBuilder static method) (nirs4all.visualization.chart_utils.MatrixBuilder static method) build_score_dict_with_dynamic_partition() (nirs4all.visualization.chart_utils.matrix_builder.MatrixBuilder static method) (nirs4all.visualization.chart_utils.MatrixBuilder static method) build_single_model() (nirs4all.controllers.models.factory.ModelFactory static method) build_unique_source_names() (in module nirs4all.controllers.models.meta_model) builder() (in module nirs4all.api.generate) BuilderState (class in nirs4all.data.synthetic.builder) BUNDLE (nirs4all.pipeline.resolver.SourceType attribute), [1] (nirs4all.pipeline.SourceType attribute), [1] bundle_format_version (nirs4all.pipeline.bundle.BundleMetadata attribute), [1] (nirs4all.pipeline.bundle.loader.BundleMetadata attribute), [1] (nirs4all.pipeline.BundleMetadata attribute), [1] bundle_loader_ (nirs4all.sklearn.NIRSPipeline attribute) (nirs4all.sklearn.NIRSPipeline property) (nirs4all.sklearn.pipeline.NIRSPipeline attribute) (nirs4all.sklearn.pipeline.NIRSPipeline property) bundle_path (nirs4all.pipeline.bundle.BundleLoader attribute) (nirs4all.pipeline.bundle.loader.BundleArtifactProvider attribute) (nirs4all.pipeline.bundle.loader.BundleLoader attribute) (nirs4all.pipeline.BundleLoader attribute) BundleArtifactProvider (class in nirs4all.pipeline.bundle.loader) BundleFormat (class in nirs4all.pipeline) (class in nirs4all.pipeline.bundle) (class in nirs4all.pipeline.bundle.generator) BundleGenerator (class in nirs4all.pipeline) (class in nirs4all.pipeline.bundle) (class in nirs4all.pipeline.bundle.generator) BundleLoader (class in nirs4all.pipeline) (class in nirs4all.pipeline.bundle) (class in nirs4all.pipeline.bundle.loader) BundleMetadata (class in nirs4all.pipeline) (class in nirs4all.pipeline.bundle) (class in nirs4all.pipeline.bundle.loader) by_branch (nirs4all.pipeline.StepArtifacts attribute), [1] (nirs4all.pipeline.trace.execution_trace.StepArtifacts attribute), [1] (nirs4all.pipeline.trace.StepArtifacts attribute), [1] by_chain (nirs4all.pipeline.StepArtifacts attribute), [1] (nirs4all.pipeline.trace.execution_trace.StepArtifacts attribute), [1] (nirs4all.pipeline.trace.StepArtifacts attribute), [1] by_source (nirs4all.pipeline.StepArtifacts attribute), [1] (nirs4all.pipeline.trace.execution_trace.StepArtifacts attribute), [1] (nirs4all.pipeline.trace.StepArtifacts attribute), [1]

C

cache (nirs4all.data.features.Features attribute) (nirs4all.data.PredictionAnalyzer attribute) (nirs4all.visualization.PredictionAnalyzer attribute) (nirs4all.visualization.predictions.PredictionAnalyzer attribute) cache_manager() (in module nirs4all.data.performance) (in module nirs4all.data.performance.cache) CacheEntry (class in nirs4all.data.performance) (class in nirs4all.data.performance.cache) CacheKey (class in nirs4all.visualization.prediction_cache) calculate() (nirs4all.controllers.models.components.score_calculator.ScoreCalculator method) (nirs4all.controllers.models.components.ScoreCalculator method) calculate_balanced_counts() (nirs4all.controllers.data.balancing.BalancingCalculator static method) calculate_balanced_counts_value_aware() (nirs4all.controllers.data.balancing.BalancingCalculator static method) calculate_combination_band() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.wavenumber) calculate_overtone_position() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.wavenumber) calculate_single() (nirs4all.controllers.models.components.score_calculator.ScoreCalculator method) (nirs4all.controllers.models.components.ScoreCalculator method) can_handle() (nirs4all.controllers.base.BaseController method) (nirs4all.controllers.BaseController method) can_parse() (nirs4all.data.parsers.base.BaseParser method) (nirs4all.data.parsers.BaseParser method) (nirs4all.data.parsers.files_parser.FilesParser method) (nirs4all.data.parsers.files_parser.SourcesParser method) (nirs4all.data.parsers.files_parser.VariationsParser method) (nirs4all.data.parsers.FilesParser method) (nirs4all.data.parsers.folder_parser.FolderParser method) (nirs4all.data.parsers.FolderParser method) (nirs4all.data.parsers.legacy_parser.LegacyParser method) (nirs4all.data.parsers.LegacyParser method) (nirs4all.data.parsers.SourcesParser method) (nirs4all.data.parsers.VariationsParser method) CandlestickChart (class in nirs4all.visualization.charts) (class in nirs4all.visualization.charts.candlestick) capture_model() (nirs4all.pipeline.Explainer method) (nirs4all.pipeline.explainer.Explainer method) captured_model (nirs4all.pipeline.Explainer attribute) (nirs4all.pipeline.explainer.Explainer attribute) carbohydrate_band_intensity (nirs4all.data.synthetic.fitter.SpectralProperties attribute), [1] (nirs4all.data.synthetic.SpectralProperties attribute), [1] CARBONYL (nirs4all.data.synthetic.FunctionalGroupType attribute) (nirs4all.data.synthetic.procedural.FunctionalGroupType attribute) CARBOXYL (nirs4all.data.synthetic.FunctionalGroupType attribute) (nirs4all.data.synthetic.procedural.FunctionalGroupType attribute) CARS (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.feature_selection) CartesianStrategy (class in nirs4all.pipeline.config.generator) cascade_to_augmented (nirs4all.operators.filters.FilteringReport attribute), [1] (nirs4all.operators.filters.report.FilteringReport attribute), [1] categorical_mode (nirs4all.data.LoadingParams attribute) (nirs4all.data.schema.config.LoadingParams attribute) (nirs4all.data.schema.LoadingParams attribute) CategoricalMode (class in nirs4all.data.schema) (class in nirs4all.data.schema.config) category (nirs4all.data.schema.validation.DiagnosticMessage property) (nirs4all.data.schema.validation.error_codes.DiagnosticMessage property) (nirs4all.data.schema.validation.error_codes.ErrorCode attribute), [1] (nirs4all.data.schema.validation.ErrorCode attribute), [1] (nirs4all.data.synthetic.DomainConfig attribute), [1] (nirs4all.data.synthetic.DomainInference attribute), [1] (nirs4all.data.synthetic.domains.DomainConfig attribute), [1] (nirs4all.data.synthetic.fitter.DomainInference attribute), [1] (nirs4all.data.synthetic.InstrumentArchetype attribute), [1] (nirs4all.data.synthetic.instruments.InstrumentArchetype attribute), [1] center (nirs4all.data.synthetic.components.NIRBand attribute), [1] (nirs4all.data.synthetic.NIRBand attribute), [1] centroid_distance (nirs4all.analysis.transfer_metrics.TransferMetrics attribute) (nirs4all.analysis.TransferMetrics attribute) CH_COMBINATION (nirs4all.data.synthetic.environmental.SpectralRegion attribute) (nirs4all.data.synthetic.SpectralRegion attribute) CH_FIRST_OVERTONE (nirs4all.data.synthetic.environmental.SpectralRegion attribute) (nirs4all.data.synthetic.SpectralRegion attribute) chain_hash (nirs4all.pipeline.storage.artifacts.ArtifactRecord property) (nirs4all.pipeline.storage.artifacts.types.ArtifactRecord property) chain_path (nirs4all.pipeline.storage.artifacts.ArtifactRecord attribute), [1] (nirs4all.pipeline.storage.artifacts.ExecutionPath attribute), [1] (nirs4all.pipeline.storage.artifacts.types.ArtifactRecord attribute), [1] (nirs4all.pipeline.storage.artifacts.utils.ExecutionPath attribute), [1] ChainStrategy (class in nirs4all.pipeline.config.generator) changed (nirs4all.data.serialization.serializer.ConfigDiff attribute), [1] ChannelDropout (class in nirs4all.operators.transforms) ChartAnnotator (class in nirs4all.visualization.chart_utils) (class in nirs4all.visualization.chart_utils.annotator) ChartConfig (class in nirs4all.visualization.charts) (class in nirs4all.visualization.charts.config) check_backend_available() (in module nirs4all.utils) (in module nirs4all.utils.backend) check_dependency() (in module nirs4all.cli.installation_test) children_ids (nirs4all.visualization.pipeline_diagram.PipelineNode attribute), [1] circular_dependencies (nirs4all.controllers.models.stacking.LevelValidationResult attribute), [1] (nirs4all.controllers.models.stacking.multilevel.LevelValidationResult attribute), [1] CircularDependencyError, [1] cka_similarity (nirs4all.analysis.transfer_metrics.TransferMetrics attribute) (nirs4all.analysis.TransferMetrics attribute) class_labels (nirs4all.controllers.models.stacking.classification.ClassificationInfo attribute), [1] (nirs4all.controllers.models.stacking.ClassificationInfo attribute), [1] class_name (nirs4all.pipeline.storage.artifacts.ArtifactRecord attribute), [1] (nirs4all.pipeline.storage.artifacts.types.ArtifactRecord attribute), [1] class_separation (nirs4all.data.synthetic.builder.BuilderState attribute) class_separation_method (nirs4all.data.synthetic.builder.BuilderState attribute) class_weights (nirs4all.data.synthetic.builder.BuilderState attribute) classes_ (nirs4all.operators.models.OPLSDA attribute) (nirs4all.operators.models.sklearn.OPLSDA attribute) (nirs4all.operators.models.sklearn.oplsda.OPLSDA attribute) (nirs4all.sklearn.classifier.NIRSPipelineClassifier property) (nirs4all.sklearn.NIRSPipelineClassifier property) classification() (in module nirs4all.api.generate) (nirs4all.data.synthetic.TargetGenerator method) (nirs4all.data.synthetic.targets.TargetGenerator method) classification_info (nirs4all.controllers.models.ReconstructionResult attribute), [1] (nirs4all.controllers.models.stacking.classification.MetaFeatureInfo attribute), [1] (nirs4all.controllers.models.stacking.MetaFeatureInfo attribute), [1] (nirs4all.controllers.models.stacking.ReconstructionResult attribute), [1] (nirs4all.controllers.models.stacking.reconstructor.ReconstructionResult attribute), [1] ClassificationFeatureExtractor (class in nirs4all.controllers.models.stacking) (class in nirs4all.controllers.models.stacking.classification) ClassificationInfo (class in nirs4all.controllers.models.stacking) (class in nirs4all.controllers.models.stacking.classification) classify_wavelength_zone() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.wavenumber) classname (nirs4all.controllers.models.components.identifier_generator.ModelIdentifiers attribute) (nirs4all.controllers.models.components.ModelIdentifiers attribute) ClassSeparationConfig (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.targets) cleanup() (nirs4all.controllers.base.BaseController method) (nirs4all.controllers.BaseController method) (nirs4all.pipeline.storage.io.SimulationSaver method) (nirs4all.pipeline.storage.SimulationSaver method) cleanup_failed_run() (nirs4all.pipeline.storage.artifacts.artifact_registry.ArtifactRegistry method) (nirs4all.pipeline.storage.artifacts.ArtifactRegistry method) clear() (nirs4all.core.logging.BufferedHandler method) (nirs4all.core.logging.handlers.BufferedHandler method) (nirs4all.data.loaders.base.LoaderRegistry method) (nirs4all.data.loaders.LoaderRegistry method) (nirs4all.data.performance.cache.DataCache method) (nirs4all.data.performance.DataCache method) (nirs4all.data.Predictions method) (nirs4all.data.predictions.Predictions method) (nirs4all.pipeline.storage.artifacts.artifact_loader.LRUCache method) (nirs4all.pipeline.storage.artifacts.artifact_registry.DependencyGraph method) (nirs4all.pipeline.storage.artifacts.DependencyGraph method) (nirs4all.visualization.prediction_cache.PredictionCache method) clear_availability_cache() (in module nirs4all.utils) (in module nirs4all.utils.backend) clear_cache() (nirs4all.controllers.models.stacking.multilevel.MultiLevelValidator method) (nirs4all.controllers.models.stacking.MultiLevelValidator method) (nirs4all.data.PredictionAnalyzer method) (nirs4all.pipeline.storage.artifacts.artifact_loader.ArtifactLoader method) (nirs4all.pipeline.storage.artifacts.ArtifactLoader method) (nirs4all.visualization.PredictionAnalyzer method) (nirs4all.visualization.predictions.PredictionAnalyzer method) clear_caches() (nirs4all.data.Predictions method) (nirs4all.data.predictions.Predictions method) clear_presets() (in module nirs4all.pipeline.config.generator) close() (nirs4all.api.Session method) (nirs4all.api.session.Session method) (nirs4all.core.logging.handlers.RotatingRunFileHandler method) (nirs4all.core.logging.handlers.ThrottledHandler method) (nirs4all.core.logging.progress.ProgressBar method) (nirs4all.core.logging.ProgressBar method) (nirs4all.core.logging.RotatingRunFileHandler method) (nirs4all.core.logging.ThrottledHandler method) (nirs4all.Session method) close_all() (nirs4all.core.logging.MultiLevelProgress method) (nirs4all.core.logging.progress.MultiLevelProgress method) code (nirs4all.controllers.models.stacking.reconstructor.ValidationError attribute) (nirs4all.controllers.models.stacking.reconstructor.ValidationWarning attribute) (nirs4all.data.schema.validation.DiagnosticMessage property) (nirs4all.data.schema.validation.error_codes.DiagnosticMessage property) (nirs4all.data.schema.validation.error_codes.ErrorCode attribute), [1] (nirs4all.data.schema.validation.ErrorCode attribute), [1] (nirs4all.data.schema.validation.ValidationError attribute), [1] (nirs4all.data.schema.validation.ValidationWarning attribute), [1] (nirs4all.data.schema.validation.validators.ValidationError attribute), [1] (nirs4all.data.schema.validation.validators.ValidationWarning attribute), [1] (nirs4all.data.schema.ValidationError attribute), [1] (nirs4all.data.schema.ValidationWarning attribute), [1] (nirs4all.data.ValidationError attribute), [1] (nirs4all.data.ValidationWarning attribute), [1] (nirs4all.pipeline.config.generator.ValidationError attribute), [1] coef_ (nirs4all.operators.models.IKPLS attribute) (nirs4all.operators.models.MBPLS attribute) (nirs4all.operators.models.RecursivePLS attribute) (nirs4all.operators.models.RobustPLS attribute) (nirs4all.operators.models.SIMPLS attribute) (nirs4all.operators.models.sklearn.IKPLS attribute) (nirs4all.operators.models.sklearn.ikpls.IKPLS attribute) (nirs4all.operators.models.sklearn.MBPLS attribute) (nirs4all.operators.models.sklearn.mbpls.MBPLS attribute) (nirs4all.operators.models.sklearn.recursive_pls.RecursivePLS attribute) (nirs4all.operators.models.sklearn.RecursivePLS attribute) (nirs4all.operators.models.sklearn.robust_pls.RobustPLS attribute) (nirs4all.operators.models.sklearn.RobustPLS attribute) (nirs4all.operators.models.sklearn.SIMPLS attribute) (nirs4all.operators.models.sklearn.simpls.SIMPLS attribute) (nirs4all.operators.models.sklearn.SparsePLS attribute) (nirs4all.operators.models.sklearn.sparsepls.SparsePLS attribute) (nirs4all.operators.models.SparsePLS attribute) COLLECT (nirs4all.core.logging.events.EventType attribute) (nirs4all.core.logging.EventType attribute) collect_features (nirs4all.operators.data.merge.MergeConfig attribute), [1] (nirs4all.operators.data.MergeConfig attribute), [1] collect_predictions (nirs4all.operators.data.merge.MergeConfig attribute), [1] (nirs4all.operators.data.MergeConfig attribute), [1] collection_angle (nirs4all.data.synthetic.measurement_modes.ReflectanceConfig attribute), [1] (nirs4all.data.synthetic.ReflectanceConfig attribute), [1] COLOR_CYAN (nirs4all.core.logging.progress.ProgressBar attribute) (nirs4all.core.logging.ProgressBar attribute) COLOR_DIM (nirs4all.core.logging.progress.ProgressBar attribute) (nirs4all.core.logging.ProgressBar attribute) COLOR_GREEN (nirs4all.core.logging.progress.ProgressBar attribute) (nirs4all.core.logging.ProgressBar attribute) COLOR_RESET (nirs4all.core.logging.progress.ProgressBar attribute) (nirs4all.core.logging.ProgressBar attribute) COLOR_YELLOW (nirs4all.core.logging.progress.ProgressBar attribute) (nirs4all.core.logging.ProgressBar attribute) colormap (nirs4all.visualization.charts.ChartConfig attribute), [1] (nirs4all.visualization.charts.config.ChartConfig attribute), [1] COLORS (nirs4all.core.logging.ConsoleFormatter attribute) (nirs4all.core.logging.formatters.ConsoleFormatter attribute) column (nirs4all.controllers.data.metadata_partitioner.MetadataPartitionConfig attribute), [1] (nirs4all.data.aggregation.AggregationConfig attribute), [1] (nirs4all.data.aggregation.aggregator.AggregationConfig attribute), [1] (nirs4all.data.PartitionConfig attribute) (nirs4all.data.schema.config.FoldConfig attribute) (nirs4all.data.schema.config.PartitionConfig attribute) (nirs4all.data.schema.FoldConfig attribute) (nirs4all.data.schema.PartitionConfig attribute) (nirs4all.operators.data.repetition.RepetitionConfig attribute), [1] (nirs4all.operators.data.RepetitionConfig attribute), [1] (nirs4all.operators.filters.metadata.MetadataFilter attribute) (nirs4all.operators.filters.MetadataFilter attribute) column_mapping (nirs4all.controllers.data.merge.DisjointMergeMetadata attribute), [1] (nirs4all.controllers.data.merge.DisjointMergeResult attribute), [1] (nirs4all.operators.data.merge.DisjointMergeMetadata attribute), [1] ColumnConfig (class in nirs4all.data) (class in nirs4all.data.schema) (class in nirs4all.data.schema.config) columns (nirs4all.data.FileConfig attribute) (nirs4all.data.metadata.Metadata property) (nirs4all.data.schema.config.FileConfig attribute) (nirs4all.data.schema.config.SharedMetadataConfig attribute) (nirs4all.data.schema.config.SharedTargetsConfig attribute) (nirs4all.data.schema.config.SourceFileConfig attribute) (nirs4all.data.schema.config.VariationFileConfig attribute) (nirs4all.data.schema.FileConfig attribute) (nirs4all.data.schema.SharedMetadataConfig attribute) (nirs4all.data.schema.SharedTargetsConfig attribute) (nirs4all.data.schema.SourceFileConfig attribute) (nirs4all.data.schema.VariationFileConfig attribute) (nirs4all.visualization.analysis.branch.BranchSummary attribute) (nirs4all.visualization.analysis.BranchSummary attribute) (nirs4all.visualization.BranchSummary attribute) ColumnSelectionError, [1], [2] ColumnSelector (class in nirs4all.data) (class in nirs4all.data.selection) (class in nirs4all.data.selection.column_selector) combination_amplitude_factor (nirs4all.data.synthetic.procedural.ProceduralComponentConfig attribute), [1] (nirs4all.data.synthetic.ProceduralComponentConfig attribute), [1] CombinationBandResult (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.wavenumber) combined_mode (nirs4all.operators.filters.FilteringReport attribute), [1] (nirs4all.operators.filters.report.FilteringReport attribute), [1] common_samples (nirs4all.controllers.models.stacking.crossbranch.CrossBranchValidationResult attribute), [1] (nirs4all.controllers.models.stacking.CrossBranchValidationResult attribute), [1] COMPARE (nirs4all.data.schema.config.VariationMode attribute) (nirs4all.data.schema.VariationMode attribute) compare() (nirs4all.visualization.analysis.branch.BranchAnalyzer method) (nirs4all.visualization.analysis.BranchAnalyzer method) (nirs4all.visualization.BranchAnalyzer method) compare_across_datasets() (nirs4all.data.Predictions method) (nirs4all.data.predictions.Predictions method) compare_datasets() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.fitter) compare_filters() (nirs4all.operators.filters.FilteringReportGenerator method) (nirs4all.operators.filters.report.FilteringReportGenerator method) compatibility (nirs4all.controllers.models.stacking.branch_validator.BranchValidationResult attribute) (nirs4all.controllers.models.stacking.BranchValidationResult attribute) (nirs4all.controllers.models.stacking.crossbranch.CrossBranchValidationResult attribute), [1] (nirs4all.controllers.models.stacking.CrossBranchValidationResult attribute), [1] COMPATIBLE (nirs4all.controllers.models.stacking.branch_validator.StackingCompatibility attribute) (nirs4all.controllers.models.stacking.crossbranch.CrossBranchCompatibility attribute) (nirs4all.controllers.models.stacking.CrossBranchCompatibility attribute) (nirs4all.controllers.models.stacking.StackingCompatibility attribute) COMPATIBLE_WITH_ALIGNMENT (nirs4all.controllers.models.stacking.crossbranch.CrossBranchCompatibility attribute) (nirs4all.controllers.models.stacking.CrossBranchCompatibility attribute) COMPATIBLE_WITH_WARNINGS (nirs4all.controllers.models.stacking.branch_validator.StackingCompatibility attribute) (nirs4all.controllers.models.stacking.StackingCompatibility attribute) COMPLETE (nirs4all.core.logging.events.EventType attribute) (nirs4all.core.logging.events.Phase attribute) (nirs4all.core.logging.EventType attribute) (nirs4all.core.logging.Phase attribute) complexity (nirs4all.data.synthetic.builder.BuilderState attribute) (nirs4all.data.synthetic.config.FeatureConfig attribute), [1] (nirs4all.data.synthetic.DomainConfig attribute), [1] (nirs4all.data.synthetic.domains.DomainConfig attribute), [1] (nirs4all.data.synthetic.FeatureConfig attribute), [1] (nirs4all.data.synthetic.FittedParameters attribute), [1] (nirs4all.data.synthetic.fitter.FittedParameters attribute), [1] (nirs4all.data.synthetic.SourceConfig attribute), [1] (nirs4all.data.synthetic.sources.SourceConfig attribute), [1] component_indices (nirs4all.data.synthetic.config.TargetConfig attribute), [1] (nirs4all.data.synthetic.TargetConfig attribute), [1] component_library (nirs4all.data.synthetic.builder.BuilderState attribute) component_names (nirs4all.data.synthetic.builder.BuilderState attribute) (nirs4all.data.synthetic.ComponentLibrary property) (nirs4all.data.synthetic.components.ComponentLibrary property) (nirs4all.data.synthetic.config.FeatureConfig attribute), [1] (nirs4all.data.synthetic.FeatureConfig attribute), [1] component_weights (nirs4all.data.synthetic.DomainConfig attribute), [1] (nirs4all.data.synthetic.domains.DomainConfig attribute), [1] ComponentLibrary (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.components) components (nirs4all.analysis.results.TransferResult attribute), [1] (nirs4all.analysis.TransferResult attribute), [1] (nirs4all.data.synthetic.ComponentLibrary property) (nirs4all.data.synthetic.components.ComponentLibrary property) (nirs4all.data.synthetic.SourceConfig attribute), [1] (nirs4all.data.synthetic.sources.SourceConfig attribute), [1]

CompositeFilter (class in nirs4all.operators.filters) (class in nirs4all.operators.filters.base) compression (nirs4all.data.synthetic.ExportConfig attribute), [1] (nirs4all.data.synthetic.exporter.ExportConfig attribute), [1] compute() (nirs4all.analysis.transfer_metrics.TransferMetricsComputer method) (nirs4all.analysis.TransferMetricsComputer method) (nirs4all.data.synthetic.components.NIRBand method) (nirs4all.data.synthetic.components.SpectralComponent method) (nirs4all.data.synthetic.NIRBand method) (nirs4all.data.synthetic.SpectralComponent method) compute_adversarial_validation_auc() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.validation) compute_all() (nirs4all.data.synthetic.ComponentLibrary method) (nirs4all.data.synthetic.components.ComponentLibrary method) compute_baseline_curvature() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.validation) compute_chain_hash() (in module nirs4all.pipeline.storage.artifacts) (in module nirs4all.pipeline.storage.artifacts.operator_chain) compute_content_hash() (in module nirs4all.pipeline.storage.artifacts) (in module nirs4all.pipeline.storage.artifacts.utils) compute_correlation_length() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.validation) compute_derivative_statistics() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.validation) compute_distribution_overlap() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.validation) compute_ensemble_prediction() (nirs4all.data.ensemble_utils.EnsembleUtils static method) compute_hard_voting() (nirs4all.data.ensemble_utils.EnsembleUtils static method) compute_hash() (in module nirs4all.pipeline.storage.artifacts.artifact_persistence) compute_input_shape() (nirs4all.controllers.models.factory.ModelFactory static method) compute_peak_density() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.validation) compute_raw_and_preprocessed() (nirs4all.analysis.transfer_metrics.TransferMetricsComputer method) (nirs4all.analysis.TransferMetricsComputer method) compute_snr() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.validation) compute_soft_voting_average() (nirs4all.data.ensemble_utils.EnsembleUtils static method) compute_spectral_properties() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.fitter) compute_spectral_realism_scorecard() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.validation) compute_transfer_score() (in module nirs4all.analysis) (in module nirs4all.analysis.transfer_metrics) compute_weighted_average() (nirs4all.data.ensemble_utils.EnsembleUtils static method) CONCAT (nirs4all.data.schema.config.VariationMode attribute) (nirs4all.data.schema.VariationMode attribute) (nirs4all.operators.data.merge.SourceMergeStrategy attribute), [1] (nirs4all.operators.data.SourceMergeStrategy attribute), [1] concat_source (nirs4all.pipeline.config.context.DataSelector attribute), [1] (nirs4all.pipeline.config.DataSelector attribute), [1] ConcatAugmentationController (class in nirs4all.controllers) (class in nirs4all.controllers.data) (class in nirs4all.controllers.data.concat_transform) concatenate_partitions() (nirs4all.data.partition.partition_assigner.PartitionAssigner method) (nirs4all.data.partition.PartitionAssigner method) (nirs4all.data.PartitionAssigner method) concentration_method (nirs4all.data.synthetic.builder.BuilderState attribute) concentration_priors (nirs4all.data.synthetic.DomainConfig attribute), [1] (nirs4all.data.synthetic.domains.DomainConfig attribute), [1] ConcentrationPrior (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.domains) condition (nirs4all.operators.filters.metadata.MetadataFilter attribute) (nirs4all.operators.filters.MetadataFilter attribute) confidence (nirs4all.data.detection.DetectionResult attribute), [1] (nirs4all.data.detection.detector.DetectionResult attribute), [1] (nirs4all.data.synthetic.DomainInference attribute), [1] (nirs4all.data.synthetic.fitter.DomainInference attribute), [1] (nirs4all.data.synthetic.fitter.InstrumentInference attribute), [1] (nirs4all.data.synthetic.InstrumentInference attribute), [1] config (nirs4all.controllers.models.FoldAlignmentValidator attribute) (nirs4all.controllers.models.stacking.FoldAlignmentValidator attribute) (nirs4all.controllers.models.stacking.reconstructor.FoldAlignmentValidator attribute) (nirs4all.data.parsers.base.ParserResult attribute), [1] (nirs4all.data.parsers.ParserResult attribute), [1] (nirs4all.data.PredictionAnalyzer attribute) (nirs4all.data.synthetic.DatasetExporter attribute) (nirs4all.data.synthetic.detectors.DetectorSimulator attribute) (nirs4all.data.synthetic.DetectorSimulator attribute) (nirs4all.data.synthetic.EMSCTransformSimulator attribute) (nirs4all.data.synthetic.environmental.EnvironmentalEffectsSimulator attribute) (nirs4all.data.synthetic.environmental.MoistureEffectSimulator attribute) (nirs4all.data.synthetic.environmental.TemperatureEffectSimulator attribute) (nirs4all.data.synthetic.EnvironmentalEffectsSimulator attribute) (nirs4all.data.synthetic.exporter.DatasetExporter attribute) (nirs4all.data.synthetic.measurement_modes.MeasurementModeSimulator attribute) (nirs4all.data.synthetic.MeasurementModeSimulator attribute) (nirs4all.data.synthetic.MoistureEffectSimulator attribute) (nirs4all.data.synthetic.ParticleSizeSimulator attribute) (nirs4all.data.synthetic.scattering.EMSCTransformSimulator attribute) (nirs4all.data.synthetic.scattering.ParticleSizeSimulator attribute) (nirs4all.data.synthetic.scattering.ScatteringCoefficientGenerator attribute) (nirs4all.data.synthetic.scattering.ScatteringEffectsSimulator attribute) (nirs4all.data.synthetic.ScatteringCoefficientGenerator attribute) (nirs4all.data.synthetic.ScatteringEffectsSimulator attribute) (nirs4all.data.synthetic.TemperatureEffectSimulator attribute) (nirs4all.visualization.branch_diagram.PipelineDiagram attribute) (nirs4all.visualization.chart_utils.annotator.ChartAnnotator attribute) (nirs4all.visualization.chart_utils.ChartAnnotator attribute) (nirs4all.visualization.charts.base.BaseChart attribute) (nirs4all.visualization.charts.BaseChart attribute) (nirs4all.visualization.pipeline_diagram.PipelineDiagram attribute) (nirs4all.visualization.PipelineDiagram attribute) (nirs4all.visualization.PredictionAnalyzer attribute) (nirs4all.visualization.predictions.PredictionAnalyzer attribute) CONFIG_LOAD (nirs4all.core.logging.events.EventType attribute) (nirs4all.core.logging.EventType attribute) config_name (nirs4all.data.PredictionResult property) (nirs4all.data.predictions.PredictionResult property) config_path (nirs4all.config.ConfigValidationError attribute) (nirs4all.config.validator.ConfigValidationError attribute) (nirs4all.data.schema.validation.DiagnosticReport attribute), [1] (nirs4all.data.schema.validation.error_codes.DiagnosticReport attribute), [1] (nirs4all.pipeline.Explainer attribute) (nirs4all.pipeline.explainer.Explainer attribute) (nirs4all.pipeline.Predictor attribute) (nirs4all.pipeline.predictor.Predictor attribute) config_show_schema() (in module nirs4all.cli.commands.config) config_validate() (in module nirs4all.cli.commands.config) ConfigDiff (class in nirs4all.data.serialization.serializer) ConfigNormalizer (class in nirs4all.data) (class in nirs4all.data.parsers) (class in nirs4all.data.parsers.normalizer) ConfigSerializer (class in nirs4all.data.serialization) (class in nirs4all.data.serialization.serializer) configure_logging() (in module nirs4all.core.logging) (in module nirs4all.core.logging.config) configure_progress() (in module nirs4all.core.logging) (in module nirs4all.core.logging.progress) configure_symbols() (in module nirs4all.core.logging.formatters) ConfigValidationError, [1] ConfigValidator (class in nirs4all.data) (class in nirs4all.data.schema) (class in nirs4all.data.schema.validation) (class in nirs4all.data.schema.validation.validators) ConfounderConfig (class in nirs4all.data.synthetic.config) confounders (nirs4all.data.synthetic.config.SyntheticDatasetConfig attribute) (nirs4all.data.synthetic.SyntheticDatasetConfig attribute) ConfusionMatrixChart (class in nirs4all.visualization.charts) (class in nirs4all.visualization.charts.confusion_matrix) ConsoleFormatter (class in nirs4all.core.logging) (class in nirs4all.core.logging.formatters) contains() (nirs4all.pipeline.storage.artifacts.artifact_loader.LRUCache method) contamination (nirs4all.operators.filters.x_outlier.XOutlierFilter attribute) (nirs4all.operators.filters.XOutlierFilter attribute) content_hash (nirs4all.pipeline.execution.ArtifactMeta attribute), [1] (nirs4all.pipeline.execution.result.ArtifactMeta attribute), [1] (nirs4all.pipeline.storage.artifacts.ArtifactRecord attribute), [1] (nirs4all.pipeline.storage.artifacts.types.ArtifactRecord attribute), [1] context (nirs4all.controllers.data.merge.ModelSelector attribute) (nirs4all.controllers.shared.model_selector.ModelSelector attribute) (nirs4all.controllers.shared.ModelSelector attribute) (nirs4all.data.schema.validation.DiagnosticMessage attribute), [1] (nirs4all.data.schema.validation.error_codes.DiagnosticMessage attribute), [1] continue_on_error (nirs4all.pipeline.execution.executor.PipelineExecutor attribute) (nirs4all.pipeline.execution.PipelineExecutor attribute) (nirs4all.pipeline.PipelineRunner attribute) (nirs4all.pipeline.runner.PipelineRunner attribute) (nirs4all.PipelineRunner attribute) ControllerRouter (class in nirs4all.pipeline.steps) (class in nirs4all.pipeline.steps.router) convert_bandwidth_to_wavelength() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.wavenumber) convert_bandwidth_to_wavenumber() (in module nirs4all.data.synthetic.wavenumber) COPY (nirs4all.operators.data.BranchType attribute), [1] (nirs4all.operators.data.merge.BranchType attribute), [1] copy() (nirs4all.pipeline.config.context.DataSelector method) (nirs4all.pipeline.config.context.ExecutionContext method) (nirs4all.pipeline.config.context.PipelineState method) (nirs4all.pipeline.config.context.StepMetadata method) (nirs4all.pipeline.config.DataSelector method) (nirs4all.pipeline.config.ExecutionContext method) (nirs4all.pipeline.config.PipelineState method) (nirs4all.pipeline.config.StepMetadata method) (nirs4all.pipeline.storage.artifacts.operator_chain.OperatorChain method) (nirs4all.pipeline.storage.artifacts.OperatorChain method) copy_from_pipeline() (nirs4all.pipeline.PipelineLibrary method) (nirs4all.pipeline.storage.library.PipelineLibrary method) (nirs4all.pipeline.storage.PipelineLibrary method) correlation_group (nirs4all.data.synthetic.components.SpectralComponent attribute), [1] (nirs4all.data.synthetic.SpectralComponent attribute), [1] CORRELATION_LENGTH (nirs4all.data.synthetic.RealismMetric attribute) (nirs4all.data.synthetic.validation.RealismMetric attribute) correlation_length_overlap (nirs4all.data.synthetic.SpectralRealismScore attribute), [1] (nirs4all.data.synthetic.validation.SpectralRealismScore attribute), [1] correlation_with_target (nirs4all.data.synthetic.SourceConfig attribute), [1] (nirs4all.data.synthetic.sources.SourceConfig attribute), [1] cos (nirs4all.data.synthetic.accelerated.AcceleratedArrays attribute) (nirs4all.data.synthetic.AcceleratedArrays attribute) COUNT (nirs4all.data.aggregation.AggregationMethod attribute) (nirs4all.data.aggregation.aggregator.AggregationMethod attribute) count() (nirs4all.pipeline.config.generator.CartesianStrategy method) (nirs4all.pipeline.config.generator.ChainStrategy method) (nirs4all.pipeline.config.generator.ExpansionStrategy method) (nirs4all.pipeline.config.generator.GridStrategy method) (nirs4all.pipeline.config.generator.LogRangeStrategy method) (nirs4all.pipeline.config.generator.OrStrategy method) (nirs4all.pipeline.config.generator.RangeStrategy method) (nirs4all.pipeline.config.generator.SampleStrategy method) (nirs4all.pipeline.config.generator.ZipStrategy method) count_combinations() (in module nirs4all.pipeline.config) (in module nirs4all.pipeline.config.generator) coverage_ratio (nirs4all.controllers.models.ReconstructionResult attribute), [1] (nirs4all.controllers.models.stacking.MetaModelArtifact attribute), [1] (nirs4all.controllers.models.stacking.ReconstructionResult attribute), [1] (nirs4all.controllers.models.stacking.reconstructor.ReconstructionResult attribute), [1] (nirs4all.controllers.models.stacking.serialization.MetaModelArtifact attribute), [1] coverage_strategy (nirs4all.operators.models.meta.StackingConfig attribute), [1] (nirs4all.operators.models.StackingConfig attribute), [1] CoverageStrategy (class in nirs4all.operators.models) (class in nirs4all.operators.models.meta) create() (nirs4all.data.schema.validation.DiagnosticBuilder method) (nirs4all.data.schema.validation.error_codes.DiagnosticBuilder method) (nirs4all.operators.models.selection.SelectorFactory class method) (nirs4all.operators.models.SelectorFactory class method) create_accelerated_arrays() (in module nirs4all.data.synthetic.accelerated) create_atr_simulator() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.measurement_modes) create_best_model_memory() (nirs4all.controllers.models.tensorflow.config.TensorFlowCallbackFactory static method) (nirs4all.controllers.models.tensorflow.TensorFlowCallbackFactory static method) create_callbacks() (nirs4all.controllers.models.tensorflow.config.TensorFlowCallbackFactory static method) (nirs4all.controllers.models.tensorflow.TensorFlowCallbackFactory static method) create_cyclic_lr() (nirs4all.controllers.models.tensorflow.config.TensorFlowCallbackFactory static method) (nirs4all.controllers.models.tensorflow.TensorFlowCallbackFactory static method) create_dataset() (nirs4all.data.synthetic.generator.SyntheticNIRSGenerator method) (nirs4all.data.synthetic.MultiSourceGenerator method) (nirs4all.data.synthetic.sources.MultiSourceGenerator method) (nirs4all.data.synthetic.SyntheticNIRSGenerator method) create_domain_aware_library() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.domains) create_early_stopping() (nirs4all.controllers.models.tensorflow.config.TensorFlowCallbackFactory static method) (nirs4all.controllers.models.tensorflow.TensorFlowCallbackFactory static method) create_lazy_dataset() (in module nirs4all.data.performance.lazy_loader) create_matched_generator() (nirs4all.data.synthetic.fitter.RealDataFitter method) (nirs4all.data.synthetic.RealDataFitter method) create_optimizer() (nirs4all.controllers.models.tensorflow.config.TensorFlowCompilationConfig static method) (nirs4all.controllers.models.tensorflow.TensorFlowCompilationConfig static method) create_pipeline() (nirs4all.pipeline.storage.manifest_manager.ManifestManager method) (nirs4all.pipeline.storage.ManifestManager method) create_reduce_lr_on_plateau() (nirs4all.controllers.models.tensorflow.config.TensorFlowCallbackFactory static method) (nirs4all.controllers.models.tensorflow.TensorFlowCallbackFactory static method) create_reflectance_simulator() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.measurement_modes) create_report() (nirs4all.operators.filters.FilteringReportGenerator method) (nirs4all.operators.filters.report.FilteringReportGenerator method) create_sample_index() (nirs4all.data.SampleLinker method) (nirs4all.data.selection.sample_linker.SampleLinker method) (nirs4all.data.selection.SampleLinker method) create_synthetic_dataset() (in module nirs4all.data.loaders.loader) create_synthetic_matching_benchmark() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.benchmarks) create_transmittance_simulator() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.measurement_modes) created_at (nirs4all.pipeline.bundle.BundleMetadata attribute), [1] (nirs4all.pipeline.bundle.loader.BundleMetadata attribute), [1] (nirs4all.pipeline.BundleMetadata attribute), [1] (nirs4all.pipeline.ExecutionTrace attribute), [1] (nirs4all.pipeline.storage.artifacts.ArtifactRecord attribute), [1] (nirs4all.pipeline.storage.artifacts.types.ArtifactRecord attribute), [1] (nirs4all.pipeline.trace.execution_trace.ExecutionTrace attribute), [1] (nirs4all.pipeline.trace.ExecutionTrace attribute), [1] CropTransformer (class in nirs4all.operators) (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.features) CrossBranchCompatibility (class in nirs4all.controllers.models.stacking) (class in nirs4all.controllers.models.stacking.crossbranch) CrossBranchStackingError, [1] CrossBranchValidationResult (class in nirs4all.controllers.models.stacking) (class in nirs4all.controllers.models.stacking.crossbranch) CrossBranchValidator (class in nirs4all.controllers.models.stacking) (class in nirs4all.controllers.models.stacking.crossbranch) CrossPartitionStackingError, [1] CrossValidatorController (class in nirs4all.controllers) (class in nirs4all.controllers.splitters.split) crystal_material (nirs4all.data.synthetic.ATRConfig attribute), [1] (nirs4all.data.synthetic.measurement_modes.ATRConfig attribute), [1] crystal_refractive_index (nirs4all.data.synthetic.ATRConfig attribute), [1] (nirs4all.data.synthetic.measurement_modes.ATRConfig attribute), [1] CSVLoader (class in nirs4all.data.loaders) (class in nirs4all.data.loaders.csv_loader_new) CSVVariationGenerator (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.exporter) CUPY (nirs4all.data.synthetic.accelerated.AcceleratorBackend attribute) (nirs4all.data.synthetic.AcceleratorBackend attribute) current_branch (nirs4all.core.logging.context.RunState property) (nirs4all.core.logging.RunState property) current_branch_path() (nirs4all.pipeline.trace.recorder.TraceRecorder method) (nirs4all.pipeline.trace.TraceRecorder method) (nirs4all.pipeline.TraceRecorder method) current_chain() (nirs4all.pipeline.trace.recorder.TraceRecorder method) (nirs4all.pipeline.trace.TraceRecorder method) (nirs4all.pipeline.TraceRecorder method) current_level (nirs4all.controllers.models.stacking.exceptions.MaxStackingLevelExceededError attribute) (nirs4all.controllers.models.stacking.MaxStackingLevelExceededError attribute) CURRENT_ONLY (nirs4all.operators.models.BranchScope attribute), [1] (nirs4all.operators.models.meta.BranchScope attribute), [1] current_phase (nirs4all.core.logging.context.RunState attribute), [1] (nirs4all.core.logging.RunState attribute), [1] current_run_dir (nirs4all.pipeline.PipelineRunner property) (nirs4all.pipeline.runner.PipelineRunner property) (nirs4all.PipelineRunner property) current_step (nirs4all.pipeline.trace.recorder.TraceRecorder attribute) (nirs4all.pipeline.trace.TraceRecorder attribute) (nirs4all.pipeline.TraceRecorder attribute) curvature_std (nirs4all.data.synthetic.fitter.SpectralProperties attribute) (nirs4all.data.synthetic.SpectralProperties attribute) custom (nirs4all.pipeline.config.context.ExecutionContext attribute) (nirs4all.pipeline.config.ExecutionContext attribute) custom_function (nirs4all.data.aggregation.AggregationConfig attribute), [1] (nirs4all.data.aggregation.aggregator.AggregationConfig attribute), [1] custom_name (nirs4all.pipeline.storage.artifacts.ArtifactRecord attribute), [1] (nirs4all.pipeline.storage.artifacts.types.ArtifactRecord attribute), [1] custom_regions (nirs4all.data.synthetic.environmental.TemperatureConfig attribute), [1] (nirs4all.data.synthetic.TemperatureConfig attribute), [1] CustomSplitter (class in nirs4all.operators.splitters.splitters) cutoff_wavelength (nirs4all.data.synthetic.detectors.DetectorSpectralResponse attribute), [1] (nirs4all.data.synthetic.DetectorSpectralResponse attribute), [1] cuvette_material (nirs4all.data.synthetic.measurement_modes.TransmittanceConfig attribute), [1] (nirs4all.data.synthetic.TransmittanceConfig attribute), [1] cv (nirs4all.controllers.data.metadata_partitioner.MetadataPartitionConfig attribute), [1]

D

DATA (nirs4all.core.logging.events.Phase attribute) (nirs4all.core.logging.Phase attribute) data (nirs4all.data.loaders.base.LoaderResult attribute) (nirs4all.data.loaders.LoaderResult attribute) (nirs4all.data.performance.cache.CacheEntry attribute), [1] (nirs4all.data.performance.CacheEntry attribute), [1] (nirs4all.data.performance.lazy_loader.LazyArray property) (nirs4all.data.performance.LazyArray property) DATA (nirs4all.data.schema.validation.error_codes.ErrorCategory attribute) (nirs4all.data.schema.validation.ErrorCategory attribute) data (nirs4all.data.selection.column_selector.SelectionResult attribute), [1] (nirs4all.data.selection.row_selector.RowSelectionResult attribute), [1] (nirs4all.visualization.analysis.branch.BranchSummary attribute) (nirs4all.visualization.analysis.BranchSummary attribute) (nirs4all.visualization.BranchSummary attribute) DataAggregator (class in nirs4all.visualization.chart_utils) (class in nirs4all.visualization.chart_utils.aggregator) DataCache (class in nirs4all.data.performance) (class in nirs4all.data.performance.cache) DataSelector (class in nirs4all.pipeline.config) (class in nirs4all.pipeline.config.context) dataset (nirs4all.pipeline.storage.artifacts.artifact_loader.ArtifactLoader attribute) (nirs4all.pipeline.storage.artifacts.artifact_registry.ArtifactRegistry attribute) (nirs4all.pipeline.storage.artifacts.ArtifactLoader attribute) (nirs4all.pipeline.storage.artifacts.ArtifactRegistry attribute) dataset_diff() (in module nirs4all.cli.commands.dataset) dataset_export() (in module nirs4all.cli.commands.dataset) dataset_inspect() (in module nirs4all.cli.commands.dataset) dataset_name (nirs4all.data.parsers.base.ParserResult attribute), [1] (nirs4all.data.parsers.ParserResult attribute), [1] (nirs4all.data.PredictionResult property) (nirs4all.data.predictions.PredictionResult property) (nirs4all.data.synthetic.DatasetComparisonResult attribute), [1] (nirs4all.data.synthetic.validation.DatasetComparisonResult attribute), [1] (nirs4all.operators.filters.FilteringReport attribute), [1] (nirs4all.operators.filters.report.FilteringReport attribute), [1] dataset_name_override (nirs4all.data.PredictionAnalyzer attribute) (nirs4all.visualization.charts.base.BaseChart attribute) (nirs4all.visualization.charts.BaseChart attribute) (nirs4all.visualization.PredictionAnalyzer attribute) (nirs4all.visualization.predictions.PredictionAnalyzer attribute) dataset_validate() (in module nirs4all.cli.commands.dataset) DatasetComparisonResult (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.validation) DatasetConfigs (class in nirs4all.data) (class in nirs4all.data.config) DatasetConfigSchema (class in nirs4all.data) (class in nirs4all.data.schema) (class in nirs4all.data.schema.config) DatasetExporter (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.exporter) decimal_separator (nirs4all.data.detection.DetectionResult attribute), [1] (nirs4all.data.detection.detector.DetectionResult attribute), [1] (nirs4all.data.LoadingParams attribute) (nirs4all.data.schema.config.LoadingParams attribute) (nirs4all.data.schema.LoadingParams attribute) decompress_gzip() (nirs4all.data.loaders.ArchiveHandler static method) (nirs4all.data.loaders.base.ArchiveHandler static method) decompress_gzip_bytes() (nirs4all.data.loaders.ArchiveHandler static method) (nirs4all.data.loaders.base.ArchiveHandler static method) decon_set() (in module nirs4all.operators.transforms) (in module nirs4all.operators.transforms.presets) DEDUPLICATE (nirs4all.core.logging.events.EventType attribute) (nirs4all.core.logging.EventType attribute) default_aggregate (nirs4all.data.PredictionAnalyzer attribute) (nirs4all.visualization.PredictionAnalyzer attribute) (nirs4all.visualization.predictions.PredictionAnalyzer attribute) DEFAULT_CACHE_SIZE (nirs4all.pipeline.storage.artifacts.artifact_loader.ArtifactLoader attribute) (nirs4all.pipeline.storage.artifacts.ArtifactLoader attribute) DEFAULT_LOSSES (nirs4all.controllers.models.utilities.ModelControllerUtils attribute) DEFAULT_METRICS (nirs4all.controllers.models.utilities.ModelControllerUtils attribute) default_pipeline (nirs4all.operators.data.merge.SourceBranchConfig attribute), [1] DEFAULT_PREDICT_VALUES (nirs4all.data.partition.partition_assigner.PartitionAssigner attribute) (nirs4all.data.partition.PartitionAssigner attribute) (nirs4all.data.PartitionAssigner attribute) DEFAULT_TEST_VALUES (nirs4all.data.partition.partition_assigner.PartitionAssigner attribute) (nirs4all.data.partition.PartitionAssigner attribute) (nirs4all.data.PartitionAssigner attribute) DEFAULT_TRAIN_VALUES (nirs4all.data.partition.partition_assigner.PartitionAssigner attribute) (nirs4all.data.partition.PartitionAssigner attribute) (nirs4all.data.PartitionAssigner attribute) default_values (nirs4all.data.indexer.Indexer property) delete_orphaned_artifacts() (nirs4all.pipeline.storage.artifacts.artifact_registry.ArtifactRegistry method) (nirs4all.pipeline.storage.artifacts.ArtifactRegistry method) delete_pipeline() (nirs4all.pipeline.storage.manifest_manager.ManifestManager method) (nirs4all.pipeline.storage.ManifestManager method) delete_pipeline_artifacts() (nirs4all.pipeline.storage.artifacts.artifact_registry.ArtifactRegistry method) (nirs4all.pipeline.storage.artifacts.ArtifactRegistry method) delete_template() (nirs4all.pipeline.PipelineLibrary method) (nirs4all.pipeline.storage.library.PipelineLibrary method) (nirs4all.pipeline.storage.PipelineLibrary method) delimiter (nirs4all.data.detection.DetectionResult attribute), [1] (nirs4all.data.detection.detector.DetectionResult attribute), [1] (nirs4all.data.LoadingParams attribute) (nirs4all.data.schema.config.LoadingParams attribute) (nirs4all.data.schema.LoadingParams attribute) DELIMITERS (nirs4all.data.detection.AutoDetector attribute) (nirs4all.data.detection.detector.AutoDetector attribute) delta_temperature (nirs4all.data.synthetic.environmental.TemperatureConfig property) (nirs4all.data.synthetic.TemperatureConfig property) dependency_chain (nirs4all.controllers.models.stacking.CircularDependencyError attribute) (nirs4all.controllers.models.stacking.exceptions.CircularDependencyError attribute) dependency_graph (nirs4all.pipeline.storage.artifacts.artifact_registry.ArtifactRegistry attribute) (nirs4all.pipeline.storage.artifacts.ArtifactRegistry attribute) dependency_id (nirs4all.controllers.models.stacking.exceptions.MissingDependencyError attribute) (nirs4all.controllers.models.stacking.MissingDependencyError attribute) dependency_name (nirs4all.controllers.models.stacking.exceptions.MissingDependencyError attribute) (nirs4all.controllers.models.stacking.MissingDependencyError attribute) DependencyGraph (class in nirs4all.pipeline.storage.artifacts) (class in nirs4all.pipeline.storage.artifacts.artifact_registry) depends_on (nirs4all.pipeline.MinimalPipelineStep attribute), [1] (nirs4all.pipeline.storage.artifacts.ArtifactRecord attribute), [1] (nirs4all.pipeline.storage.artifacts.types.ArtifactRecord attribute), [1] (nirs4all.pipeline.trace.extractor.MinimalPipelineStep attribute), [1] (nirs4all.pipeline.trace.MinimalPipelineStep attribute), [1] depth (nirs4all.core.logging.BranchContext attribute), [1] (nirs4all.core.logging.context.BranchContext attribute), [1] Derivate (class in nirs4all.operators) (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.scalers) derivate() (in module nirs4all.operators) (in module nirs4all.operators.transforms) (in module nirs4all.operators.transforms.scalers) derivative_ks_pvalue (nirs4all.data.synthetic.SpectralRealismScore attribute), [1] (nirs4all.data.synthetic.validation.SpectralRealismScore attribute), [1] DERIVATIVE_STATISTICS (nirs4all.data.synthetic.RealismMetric attribute) (nirs4all.data.synthetic.validation.RealismMetric attribute) description (nirs4all.data.DatasetConfigSchema attribute) (nirs4all.data.schema.config.DatasetConfigSchema attribute) (nirs4all.data.schema.config.PreprocessingApplied attribute) (nirs4all.data.schema.config.VariationConfig attribute) (nirs4all.data.schema.DatasetConfigSchema attribute) (nirs4all.data.schema.PreprocessingApplied attribute) (nirs4all.data.schema.VariationConfig attribute) (nirs4all.data.synthetic.DomainConfig attribute), [1] (nirs4all.data.synthetic.domains.DomainConfig attribute), [1] (nirs4all.data.synthetic.InstrumentArchetype attribute), [1] (nirs4all.data.synthetic.instruments.InstrumentArchetype attribute), [1] deserialize_component() (in module nirs4all.pipeline.config.component_serialization) deserialize_config() (in module nirs4all.data.serialization) (in module nirs4all.data.serialization.serializer) detailed_scores (nirs4all.controllers.models.components.PartitionScores attribute) (nirs4all.controllers.models.components.score_calculator.PartitionScores attribute) details (nirs4all.controllers.models.stacking.exceptions.MetaModelError attribute) (nirs4all.controllers.models.stacking.MetaModelError attribute) (nirs4all.controllers.models.stacking.reconstructor.ValidationError attribute) (nirs4all.controllers.models.stacking.reconstructor.ValidationWarning attribute) (nirs4all.data.synthetic.MetricResult attribute), [1] (nirs4all.data.synthetic.validation.MetricResult attribute), [1] detect() (nirs4all.controllers.models.stacking.classification.TaskTypeDetector method) (nirs4all.controllers.models.stacking.TaskTypeDetector method) (nirs4all.data.detection.AutoDetector method) (nirs4all.data.detection.detector.AutoDetector method) (nirs4all.data.signal_type.SignalTypeDetector method) (nirs4all.data.SignalTypeDetector method)

detect_best_backend() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.accelerated) detect_branch_type() (in module nirs4all.controllers.models.stacking) (in module nirs4all.controllers.models.stacking.branch_validator) detect_disjoint_branches() (in module nirs4all.controllers.data.merge) detect_file_parameters() (in module nirs4all.data.detection) (in module nirs4all.data.detection.detector) detect_format() (nirs4all.data.loaders.base.FileLoader class method) (nirs4all.data.loaders.FileLoader class method) detect_framework() (nirs4all.controllers.models.factory.ModelFactory static method) detect_level() (nirs4all.controllers.models.stacking.multilevel.MultiLevelValidator method) (nirs4all.controllers.models.stacking.MultiLevelValidator method) detect_signal_type() (in module nirs4all.data) (in module nirs4all.data.detection) (in module nirs4all.data.detection.detector) (in module nirs4all.data.signal_type) (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.SpectroDataset method) detect_stacking_level() (in module nirs4all.controllers.models.stacking) (in module nirs4all.controllers.models.stacking.multilevel) detect_task_type() (in module nirs4all.core) (in module nirs4all.core.task_detection) (nirs4all.controllers.models.utilities.ModelControllerUtils static method) detected_components (nirs4all.data.synthetic.DomainInference attribute), [1] (nirs4all.data.synthetic.FittedParameters attribute), [1] (nirs4all.data.synthetic.fitter.DomainInference attribute), [1] (nirs4all.data.synthetic.fitter.FittedParameters attribute), [1] detected_level (nirs4all.controllers.models.stacking.LevelValidationResult attribute), [1] (nirs4all.controllers.models.stacking.multilevel.LevelValidationResult attribute), [1] DetectionResult (class in nirs4all.data.detection) (class in nirs4all.data.detection.detector) detector_type (nirs4all.data.synthetic.DetectorConfig attribute), [1] (nirs4all.data.synthetic.detectors.DetectorConfig attribute), [1] (nirs4all.data.synthetic.detectors.DetectorSpectralResponse attribute), [1] (nirs4all.data.synthetic.DetectorSpectralResponse attribute), [1] (nirs4all.data.synthetic.fitter.InstrumentInference attribute), [1] (nirs4all.data.synthetic.InstrumentArchetype attribute), [1] (nirs4all.data.synthetic.InstrumentInference attribute), [1] (nirs4all.data.synthetic.instruments.InstrumentArchetype attribute), [1] (nirs4all.data.synthetic.instruments.SensorConfig attribute), [1] (nirs4all.data.synthetic.SensorConfig attribute), [1] DetectorConfig (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.detectors) DetectorSimulator (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.detectors) DetectorSpectralResponse (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.detectors) DetectorType (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.instruments) Detrend (class in nirs4all.operators) (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.signal) detrend() (in module nirs4all.operators) (in module nirs4all.operators.transforms) (in module nirs4all.operators.transforms.signal) df (nirs4all.data.indexer.Indexer property) DiagnosticBuilder (class in nirs4all.data.schema.validation) (class in nirs4all.data.schema.validation.error_codes) DiagnosticMessage (class in nirs4all.data.schema.validation) (class in nirs4all.data.schema.validation.error_codes) DiagnosticReport (class in nirs4all.data.schema.validation) (class in nirs4all.data.schema.validation.error_codes) DICT (nirs4all.operators.data.merge.SourceMergeStrategy attribute), [1] (nirs4all.operators.data.SourceMergeStrategy attribute), [1] diff() (nirs4all.data.serialization.ConfigSerializer method) (nirs4all.data.serialization.serializer.ConfigSerializer method) diff_configs() (in module nirs4all.data.serialization) (in module nirs4all.data.serialization.serializer) (in module nirs4all.pipeline.config.generator) DIODE_ARRAY (nirs4all.data.synthetic.InstrumentCategory attribute) (nirs4all.data.synthetic.instruments.InstrumentCategory attribute) DiPLS (class in nirs4all.operators.models) (class in nirs4all.operators.models.sklearn) (class in nirs4all.operators.models.sklearn.dipls) DIRECT (nirs4all.pipeline.steps.parser.StepType attribute) discard_outliers (nirs4all.data.synthetic.instruments.MultiScanConfig attribute), [1] (nirs4all.data.synthetic.MultiScanConfig attribute), [1] DisjointBranchAnalysis (class in nirs4all.controllers.data.merge) DisjointBranchInfo (class in nirs4all.controllers.data.merge) (class in nirs4all.operators.data.merge) DisjointMergeMetadata (class in nirs4all.controllers.data.merge) (class in nirs4all.operators.data.merge) DisjointMergeResult (class in nirs4all.controllers.data.merge) DisjointSampleSetsError, [1] DisjointSelectionCriterion (class in nirs4all.operators.data) (class in nirs4all.operators.data.merge) display_name (nirs4all.controllers.models.components.identifier_generator.ModelIdentifiers attribute) (nirs4all.controllers.models.components.ModelIdentifiers attribute) distribution (nirs4all.data.synthetic.ConcentrationPrior attribute), [1] (nirs4all.data.synthetic.config.TargetConfig attribute), [1] (nirs4all.data.synthetic.domains.ConcentrationPrior attribute), [1] (nirs4all.data.synthetic.ParticleSizeConfig attribute), [1] (nirs4all.data.synthetic.ParticleSizeDistribution attribute), [1] (nirs4all.data.synthetic.scattering.ParticleSizeConfig attribute), [1] (nirs4all.data.synthetic.scattering.ParticleSizeDistribution attribute), [1] (nirs4all.data.synthetic.SourceConfig attribute), [1] (nirs4all.data.synthetic.sources.SourceConfig attribute), [1] (nirs4all.data.synthetic.TargetConfig attribute), [1] DiversitySelector (class in nirs4all.operators.models) (class in nirs4all.operators.models.selection) DMD (nirs4all.data.synthetic.instruments.MonochromatorType attribute) (nirs4all.data.synthetic.MonochromatorType attribute) documentation_url (nirs4all.data.schema.validation.error_codes.ErrorCode attribute), [1] (nirs4all.data.schema.validation.ErrorCode attribute), [1] domain (nirs4all.data.synthetic.BenchmarkDatasetInfo attribute), [1] (nirs4all.data.synthetic.benchmarks.BenchmarkDatasetInfo attribute), [1] domain_inference (nirs4all.data.synthetic.FittedParameters attribute), [1] (nirs4all.data.synthetic.fitter.FittedParameters attribute), [1] domain_name (nirs4all.data.synthetic.DomainInference attribute), [1] (nirs4all.data.synthetic.fitter.DomainInference attribute), [1] domain_weights (nirs4all.data.synthetic.NIRSPriorConfig attribute), [1] (nirs4all.data.synthetic.prior.NIRSPriorConfig attribute), [1] DomainCategory (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.domains) DomainConfig (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.domains) DomainInference (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.fitter) dot (nirs4all.data.synthetic.accelerated.AcceleratedArrays attribute) (nirs4all.data.synthetic.AcceleratedArrays attribute) dpi (nirs4all.visualization.charts.ChartConfig attribute), [1] (nirs4all.visualization.charts.config.ChartConfig attribute), [1] DROP (nirs4all.operators.data.repetition.UnequelRepsStrategy attribute), [1] (nirs4all.operators.data.UnequelRepsStrategy attribute), [1] DROP_INCOMPLETE (nirs4all.operators.models.CoverageStrategy attribute), [1] (nirs4all.operators.models.meta.CoverageStrategy attribute), [1] dropped_models (nirs4all.controllers.data.merge.DisjointBranchInfo attribute), [1] (nirs4all.operators.data.merge.DisjointBranchInfo attribute), [1] dtype (nirs4all.data.performance.lazy_loader.LazyArray property) (nirs4all.data.performance.LazyArray property) dumb_and_dumber_set() (in module nirs4all.operators.transforms) (in module nirs4all.operators.transforms.presets) dumb_set() (in module nirs4all.operators.transforms) (in module nirs4all.operators.transforms.presets) dumb_set_2D() (in module nirs4all.operators.transforms) (in module nirs4all.operators.transforms.presets) DummyController (class in nirs4all.controllers) (class in nirs4all.controllers.flow) (class in nirs4all.controllers.flow.dummy) duration_ms (nirs4all.core.logging.events.LogEvent attribute), [1] (nirs4all.core.logging.LogEvent attribute), [1] (nirs4all.pipeline.ExecutionStep attribute), [1] (nirs4all.pipeline.trace.execution_trace.ExecutionStep attribute), [1] (nirs4all.pipeline.trace.ExecutionStep attribute), [1] (nirs4all.visualization.pipeline_diagram.PipelineNode attribute), [1]

E

E (nirs4all.data.synthetic.generator.SyntheticNIRSGenerator attribute) (nirs4all.data.synthetic.SyntheticNIRSGenerator attribute) E100 (nirs4all.data.schema.validation.error_codes.ErrorRegistry attribute) (nirs4all.data.schema.validation.ErrorRegistry attribute) E101 (nirs4all.data.schema.validation.error_codes.ErrorRegistry attribute) (nirs4all.data.schema.validation.ErrorRegistry attribute) E102 (nirs4all.data.schema.validation.error_codes.ErrorRegistry attribute) (nirs4all.data.schema.validation.ErrorRegistry attribute) E103 (nirs4all.data.schema.validation.error_codes.ErrorRegistry attribute) (nirs4all.data.schema.validation.ErrorRegistry attribute) E104 (nirs4all.data.schema.validation.error_codes.ErrorRegistry attribute) (nirs4all.data.schema.validation.ErrorRegistry attribute) E200 (nirs4all.data.schema.validation.error_codes.ErrorRegistry attribute) (nirs4all.data.schema.validation.ErrorRegistry attribute) E201 (nirs4all.data.schema.validation.error_codes.ErrorRegistry attribute) (nirs4all.data.schema.validation.ErrorRegistry attribute) E202 (nirs4all.data.schema.validation.error_codes.ErrorRegistry attribute) (nirs4all.data.schema.validation.ErrorRegistry attribute) E203 (nirs4all.data.schema.validation.error_codes.ErrorRegistry attribute) (nirs4all.data.schema.validation.ErrorRegistry attribute) E204 (nirs4all.data.schema.validation.error_codes.ErrorRegistry attribute) (nirs4all.data.schema.validation.ErrorRegistry attribute) E300 (nirs4all.data.schema.validation.error_codes.ErrorRegistry attribute) (nirs4all.data.schema.validation.ErrorRegistry attribute) E301 (nirs4all.data.schema.validation.error_codes.ErrorRegistry attribute) (nirs4all.data.schema.validation.ErrorRegistry attribute) E302 (nirs4all.data.schema.validation.error_codes.ErrorRegistry attribute) (nirs4all.data.schema.validation.ErrorRegistry attribute) E303 (nirs4all.data.schema.validation.error_codes.ErrorRegistry attribute) (nirs4all.data.schema.validation.ErrorRegistry attribute) E304 (nirs4all.data.schema.validation.error_codes.ErrorRegistry attribute) (nirs4all.data.schema.validation.ErrorRegistry attribute) E400 (nirs4all.data.schema.validation.error_codes.ErrorRegistry attribute) (nirs4all.data.schema.validation.ErrorRegistry attribute) E401 (nirs4all.data.schema.validation.error_codes.ErrorRegistry attribute) (nirs4all.data.schema.validation.ErrorRegistry attribute) E402 (nirs4all.data.schema.validation.error_codes.ErrorRegistry attribute) (nirs4all.data.schema.validation.ErrorRegistry attribute) E403 (nirs4all.data.schema.validation.error_codes.ErrorRegistry attribute) (nirs4all.data.schema.validation.ErrorRegistry attribute) E500 (nirs4all.data.schema.validation.error_codes.ErrorRegistry attribute) (nirs4all.data.schema.validation.ErrorRegistry attribute) E501 (nirs4all.data.schema.validation.error_codes.ErrorRegistry attribute) (nirs4all.data.schema.validation.ErrorRegistry attribute) E502 (nirs4all.data.schema.validation.error_codes.ErrorRegistry attribute) (nirs4all.data.schema.validation.ErrorRegistry attribute) E503 (nirs4all.data.schema.validation.error_codes.ErrorRegistry attribute) (nirs4all.data.schema.validation.ErrorRegistry attribute) E600 (nirs4all.data.schema.validation.error_codes.ErrorRegistry attribute) (nirs4all.data.schema.validation.ErrorRegistry attribute) E601 (nirs4all.data.schema.validation.error_codes.ErrorRegistry attribute) (nirs4all.data.schema.validation.ErrorRegistry attribute) E602 (nirs4all.data.schema.validation.error_codes.ErrorRegistry attribute) (nirs4all.data.schema.validation.ErrorRegistry attribute) E700 (nirs4all.data.schema.validation.error_codes.ErrorRegistry attribute) (nirs4all.data.schema.validation.ErrorRegistry attribute) E701 (nirs4all.data.schema.validation.error_codes.ErrorRegistry attribute) (nirs4all.data.schema.validation.ErrorRegistry attribute) E702 (nirs4all.data.schema.validation.error_codes.ErrorRegistry attribute) (nirs4all.data.schema.validation.ErrorRegistry attribute) E703 (nirs4all.data.schema.validation.error_codes.ErrorRegistry attribute) (nirs4all.data.schema.validation.ErrorRegistry attribute) E704 (nirs4all.data.schema.validation.error_codes.ErrorRegistry attribute) (nirs4all.data.schema.validation.ErrorRegistry attribute) E800 (nirs4all.data.schema.validation.error_codes.ErrorRegistry attribute) (nirs4all.data.schema.validation.ErrorRegistry attribute) E801 (nirs4all.data.schema.validation.error_codes.ErrorRegistry attribute) (nirs4all.data.schema.validation.ErrorRegistry attribute) E802 (nirs4all.data.schema.validation.error_codes.ErrorRegistry attribute) (nirs4all.data.schema.validation.ErrorRegistry attribute) E900 (nirs4all.data.schema.validation.error_codes.ErrorRegistry attribute) (nirs4all.data.schema.validation.ErrorRegistry attribute) edges (nirs4all.visualization.branch_diagram.PipelineDiagram attribute) (nirs4all.visualization.pipeline_diagram.PipelineDiagram attribute) effective_resolution (nirs4all.data.synthetic.fitter.SpectralProperties attribute), [1] (nirs4all.data.synthetic.SpectralProperties attribute), [1] EMBEDDED (nirs4all.data.synthetic.InstrumentCategory attribute) (nirs4all.data.synthetic.instruments.InstrumentCategory attribute) emit() (nirs4all.core.logging.BufferedHandler method) (nirs4all.core.logging.handlers.BufferedHandler method) (nirs4all.core.logging.handlers.NullHandler method) (nirs4all.core.logging.handlers.RotatingRunFileHandler method) (nirs4all.core.logging.handlers.ThrottledHandler method) (nirs4all.core.logging.NullHandler method) (nirs4all.core.logging.RotatingRunFileHandler method) (nirs4all.core.logging.ThrottledHandler method) EMPTY_ASCII (nirs4all.core.logging.progress.ProgressBar attribute) (nirs4all.core.logging.ProgressBar attribute) EMPTY_UNICODE (nirs4all.core.logging.progress.ProgressBar attribute) (nirs4all.core.logging.ProgressBar attribute) emsc (nirs4all.data.synthetic.scattering.ScatteringEffectsConfig attribute), [1] EMSC (nirs4all.data.synthetic.scattering.ScatteringModel attribute) emsc (nirs4all.data.synthetic.ScatteringEffectsConfig attribute), [1] EMSC (nirs4all.data.synthetic.ScatteringModel attribute) emsc_config (nirs4all.data.synthetic.FittedParameters attribute), [1] (nirs4all.data.synthetic.fitter.FittedParameters attribute), [1] emsc_sim (nirs4all.data.synthetic.scattering.ScatteringEffectsSimulator attribute) (nirs4all.data.synthetic.ScatteringEffectsSimulator attribute) EMSCConfig (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.scattering) EMSCTransformSimulator (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.scattering) EMULSION (nirs4all.data.synthetic.MatrixType attribute) (nirs4all.data.synthetic.prior.MatrixType attribute) enable_broadening (nirs4all.data.synthetic.environmental.TemperatureConfig attribute), [1] (nirs4all.data.synthetic.TemperatureConfig attribute), [1] enable_emsc (nirs4all.data.synthetic.scattering.ScatteringEffectsConfig attribute), [1] (nirs4all.data.synthetic.ScatteringEffectsConfig attribute), [1] enable_intensity (nirs4all.data.synthetic.environmental.TemperatureConfig attribute), [1] (nirs4all.data.synthetic.TemperatureConfig attribute), [1] enable_moisture (nirs4all.data.synthetic.environmental.EnvironmentalEffectsConfig attribute), [1] (nirs4all.data.synthetic.EnvironmentalEffectsConfig attribute), [1] enable_particle_size (nirs4all.data.synthetic.scattering.ScatteringEffectsConfig attribute), [1] (nirs4all.data.synthetic.ScatteringEffectsConfig attribute), [1] enable_shift (nirs4all.data.synthetic.environmental.TemperatureConfig attribute), [1] (nirs4all.data.synthetic.TemperatureConfig attribute), [1] enable_tab_reports (nirs4all.pipeline.execution.orchestrator.PipelineOrchestrator attribute) (nirs4all.pipeline.execution.PipelineOrchestrator attribute) (nirs4all.pipeline.PipelineRunner attribute) (nirs4all.pipeline.runner.PipelineRunner attribute) (nirs4all.PipelineRunner attribute) enable_temperature (nirs4all.data.synthetic.environmental.EnvironmentalEffectsConfig attribute), [1] (nirs4all.data.synthetic.EnvironmentalEffectsConfig attribute), [1] enabled (nirs4all.data.synthetic.BatchEffectConfig attribute), [1] (nirs4all.data.synthetic.config.BatchEffectConfig attribute), [1] (nirs4all.data.synthetic.instruments.MultiScanConfig attribute), [1] (nirs4all.data.synthetic.instruments.MultiSensorConfig attribute), [1] (nirs4all.data.synthetic.MultiScanConfig attribute), [1] (nirs4all.data.synthetic.MultiSensorConfig attribute), [1] ENCODER (nirs4all.pipeline.storage.artifacts.ArtifactType attribute) (nirs4all.pipeline.storage.artifacts.types.ArtifactType attribute) encoding (nirs4all.data.detection.DetectionResult attribute), [1] (nirs4all.data.detection.detector.DetectionResult attribute), [1] (nirs4all.data.LoadingParams attribute) (nirs4all.data.schema.config.LoadingParams attribute) (nirs4all.data.schema.LoadingParams attribute) end_run() (nirs4all.pipeline.storage.artifacts.artifact_registry.ArtifactRegistry method) (nirs4all.pipeline.storage.artifacts.ArtifactRegistry method) end_step() (nirs4all.pipeline.trace.recorder.TraceRecorder method) (nirs4all.pipeline.trace.TraceRecorder method) (nirs4all.pipeline.TraceRecorder method) EnhancedZipLoader (class in nirs4all.data.loaders) (class in nirs4all.data.loaders.archive_loader) EnsembleUtils (class in nirs4all.data.ensemble_utils) enter_branch() (nirs4all.pipeline.trace.recorder.TraceRecorder method) (nirs4all.pipeline.trace.TraceRecorder method) (nirs4all.pipeline.TraceRecorder method) ENVIRONMENT (nirs4all.core.logging.events.EventType attribute) (nirs4all.core.logging.EventType attribute) ENVIRONMENTAL (nirs4all.data.synthetic.BenchmarkDomain attribute) (nirs4all.data.synthetic.benchmarks.BenchmarkDomain attribute) (nirs4all.data.synthetic.DomainCategory attribute) (nirs4all.data.synthetic.domains.DomainCategory attribute) environmental_inference (nirs4all.data.synthetic.FittedParameters attribute), [1] (nirs4all.data.synthetic.fitter.FittedParameters attribute), [1] environmental_simulator (nirs4all.data.synthetic.generator.SyntheticNIRSGenerator attribute) (nirs4all.data.synthetic.SyntheticNIRSGenerator attribute) EnvironmentalEffectsConfig (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.environmental) EnvironmentalEffectsSimulator (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.environmental) EnvironmentalInference (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.fitter) epochs (nirs4all.pipeline.RetrainConfig attribute), [1] (nirs4all.pipeline.retrainer.RetrainConfig attribute), [1] ERROR (nirs4all.core.logging.events.EventType attribute) (nirs4all.core.logging.events.Status attribute) (nirs4all.core.logging.EventType attribute) error (nirs4all.core.logging.formatters.Symbols property) ERROR (nirs4all.core.logging.Status attribute) error (nirs4all.core.logging.Symbols property) (nirs4all.data.loaders.base.LoaderResult property) (nirs4all.data.loaders.LoaderResult property) ERROR (nirs4all.data.schema.validation.error_codes.ErrorSeverity attribute) (nirs4all.data.schema.validation.ErrorSeverity attribute) (nirs4all.operators.data.merge.ShapeMismatchStrategy attribute), [1] (nirs4all.operators.data.merge.SourceIncompatibleStrategy attribute), [1] (nirs4all.operators.data.repetition.UnequelRepsStrategy attribute), [1] (nirs4all.operators.data.ShapeMismatchStrategy attribute), [1] (nirs4all.operators.data.SourceIncompatibleStrategy attribute), [1] (nirs4all.operators.data.UnequelRepsStrategy attribute), [1] (nirs4all.pipeline.config.generator.ValidationSeverity attribute) error_code (nirs4all.data.schema.validation.DiagnosticMessage attribute), [1] (nirs4all.data.schema.validation.error_codes.DiagnosticMessage attribute), [1] ErrorCategory (class in nirs4all.data.schema.validation) (class in nirs4all.data.schema.validation.error_codes) ErrorCode (class in nirs4all.data.schema.validation) (class in nirs4all.data.schema.validation.error_codes) ErrorRegistry (class in nirs4all.data.schema.validation) (class in nirs4all.data.schema.validation.error_codes) errors (nirs4all.config.ConfigValidationError attribute) (nirs4all.config.validator.ConfigValidationError attribute) (nirs4all.controllers.models.stacking.branch_validator.BranchValidationResult attribute) (nirs4all.controllers.models.stacking.BranchValidationResult attribute) (nirs4all.controllers.models.stacking.crossbranch.CrossBranchValidationResult attribute), [1] (nirs4all.controllers.models.stacking.CrossBranchValidationResult attribute), [1] (nirs4all.controllers.models.stacking.LevelValidationResult attribute), [1] (nirs4all.controllers.models.stacking.multilevel.LevelValidationResult attribute), [1] (nirs4all.controllers.models.stacking.reconstructor.ValidationResult attribute), [1] (nirs4all.controllers.models.stacking.ValidationResult attribute), [1] (nirs4all.controllers.models.ValidationResult attribute), [1] (nirs4all.data.parsers.base.ParserResult attribute), [1] (nirs4all.data.parsers.ParserResult attribute), [1] (nirs4all.data.schema.validation.DiagnosticReport property) (nirs4all.data.schema.validation.error_codes.DiagnosticReport property) (nirs4all.data.schema.validation.ValidationResult attribute), [1] (nirs4all.data.schema.validation.validators.ValidationResult attribute), [1] (nirs4all.data.schema.ValidationResult attribute), [1] (nirs4all.data.ValidationResult attribute), [1] (nirs4all.pipeline.config.generator.ValidationResult attribute), [1] ErrorSeverity (class in nirs4all.data.schema.validation) (class in nirs4all.data.schema.validation.error_codes) estimate_bandwidth_broadening() (in module nirs4all.data.synthetic.wavenumber) estimated_moisture_variation (nirs4all.data.synthetic.EnvironmentalInference attribute), [1] (nirs4all.data.synthetic.fitter.EnvironmentalInference attribute), [1] estimated_particle_size_um (nirs4all.data.synthetic.fitter.ScatteringInference attribute), [1] (nirs4all.data.synthetic.ScatteringInference attribute), [1] estimated_resolution (nirs4all.data.synthetic.fitter.InstrumentInference attribute), [1] (nirs4all.data.synthetic.InstrumentInference attribute), [1] estimated_temperature_variation (nirs4all.data.synthetic.EnvironmentalInference attribute), [1] (nirs4all.data.synthetic.fitter.EnvironmentalInference attribute), [1] eval() (in module nirs4all.core.metrics) eval_list() (in module nirs4all.core.metrics) eval_multi() (in module nirs4all.core.metrics) eval_score() (nirs4all.data.PredictionResult method) (nirs4all.data.predictions.PredictionResult method) EVALUATE (nirs4all.core.logging.events.Phase attribute) (nirs4all.core.logging.Phase attribute) evaluate_similarity() (nirs4all.data.synthetic.fitter.RealDataFitter method) (nirs4all.data.synthetic.RealDataFitter method) evaluation_progress() (in module nirs4all.core.logging) (in module nirs4all.core.logging.progress) EvaluationProgress (class in nirs4all.core.logging) (class in nirs4all.core.logging.progress) event_type (nirs4all.core.logging.events.LogEvent attribute), [1] (nirs4all.core.logging.LogEvent attribute), [1] EventType (class in nirs4all.core.logging) (class in nirs4all.core.logging.events) evr_source (nirs4all.analysis.transfer_metrics.TransferMetrics attribute) (nirs4all.analysis.TransferMetrics attribute) evr_target (nirs4all.analysis.transfer_metrics.TransferMetrics attribute) (nirs4all.analysis.TransferMetrics attribute) ExcelLoader (class in nirs4all.data.loaders) (class in nirs4all.data.loaders.excel_loader) exclude_classnames (nirs4all.operators.models.AllPreviousModelsSelector attribute) (nirs4all.operators.models.selection.AllPreviousModelsSelector attribute) exclude_outliers (nirs4all.data.aggregation.AggregationConfig attribute), [1] (nirs4all.data.aggregation.aggregator.AggregationConfig attribute), [1] excluded_fold_ids (nirs4all.controllers.models.ReconstructorConfig attribute), [1] (nirs4all.controllers.models.stacking.config.ReconstructorConfig attribute), [1] (nirs4all.controllers.models.stacking.ReconstructorConfig attribute), [1] excluded_indices (nirs4all.controllers.data.outlier_excluder.OutlierExclusionResult attribute) (nirs4all.operators.filters.FilterResult attribute), [1] (nirs4all.operators.filters.report.FilterResult attribute), [1] exclusion_info (nirs4all.controllers.models.stacking.branch_validator.BranchInfo attribute) (nirs4all.controllers.models.stacking.BranchInfo attribute) exclusion_mask (nirs4all.controllers.data.outlier_excluder.OutlierExclusionResult attribute) exclusion_rate (nirs4all.operators.filters.FilterResult attribute), [1] (nirs4all.operators.filters.report.FilterResult attribute), [1] exclusion_reason (nirs4all.operators.filters.base.CompositeFilter property) (nirs4all.operators.filters.base.SampleFilter property) (nirs4all.operators.filters.CompositeFilter property) (nirs4all.operators.filters.high_leverage.HighLeverageFilter property) (nirs4all.operators.filters.HighLeverageFilter property) (nirs4all.operators.filters.metadata.MetadataFilter property) (nirs4all.operators.filters.MetadataFilter property) (nirs4all.operators.filters.SampleFilter property) (nirs4all.operators.filters.spectral_quality.SpectralQualityFilter property) (nirs4all.operators.filters.SpectralQualityFilter property) (nirs4all.operators.filters.x_outlier.XOutlierFilter property) (nirs4all.operators.filters.XOutlierFilter property) (nirs4all.operators.filters.y_outlier.YOutlierFilter property) (nirs4all.operators.filters.YOutlierFilter property) (nirs4all.operators.SampleFilter property) (nirs4all.operators.YOutlierFilter property) ExclusionChartController (class in nirs4all.controllers.charts) (class in nirs4all.controllers.charts.exclusion) execute() (nirs4all.controllers.AugmentationChartController method) (nirs4all.controllers.AutoTransferPreprocessingController method) (nirs4all.controllers.base.BaseController method) (nirs4all.controllers.BaseController method) (nirs4all.controllers.BranchController method) (nirs4all.controllers.charts.augmentation.AugmentationChartController method) (nirs4all.controllers.charts.exclusion.ExclusionChartController method) (nirs4all.controllers.charts.ExclusionChartController method) (nirs4all.controllers.charts.folds.FoldChartController method) (nirs4all.controllers.charts.spectra.SpectraChartController method) (nirs4all.controllers.charts.spectral_distribution.SpectralDistributionController method) (nirs4all.controllers.charts.targets.YChartController method) (nirs4all.controllers.ConcatAugmentationController method) (nirs4all.controllers.controller.OperatorController method) (nirs4all.controllers.CrossValidatorController method) (nirs4all.controllers.data.auto_transfer_preproc.AutoTransferPreprocessingController method) (nirs4all.controllers.data.AutoTransferPreprocessingController method) (nirs4all.controllers.data.branch.BranchController method) (nirs4all.controllers.data.concat_transform.ConcatAugmentationController method) (nirs4all.controllers.data.ConcatAugmentationController method) (nirs4all.controllers.data.feature_augmentation.FeatureAugmentationController method) (nirs4all.controllers.data.feature_selection.FeatureSelectionController method) (nirs4all.controllers.data.FeatureAugmentationController method) (nirs4all.controllers.data.FeatureSelectionController method) (nirs4all.controllers.data.merge.MergeController method) (nirs4all.controllers.data.MergeController method) (nirs4all.controllers.data.metadata_partitioner.MetadataPartitionerController method) (nirs4all.controllers.data.MetadataPartitionerController method) (nirs4all.controllers.data.outlier_excluder.OutlierExcluderController method) (nirs4all.controllers.data.OutlierExcluderController method) (nirs4all.controllers.data.repetition.RepToPPController method) (nirs4all.controllers.data.repetition.RepToSourcesController method) (nirs4all.controllers.data.RepToPPController method) (nirs4all.controllers.data.RepToSourcesController method) (nirs4all.controllers.data.resampler.ResamplerController method) (nirs4all.controllers.data.ResamplerController method) (nirs4all.controllers.data.sample_augmentation.SampleAugmentationController method) (nirs4all.controllers.data.sample_filter.SampleFilterController method) (nirs4all.controllers.data.sample_partitioner.SamplePartitionerController method) (nirs4all.controllers.data.SampleAugmentationController method) (nirs4all.controllers.data.SampleFilterController method) (nirs4all.controllers.data.SamplePartitionerController method) (nirs4all.controllers.data.source_branch.SourceBranchController method) (nirs4all.controllers.data.SourceBranchController method) (nirs4all.controllers.DummyController method) (nirs4all.controllers.FeatureAugmentationController method) (nirs4all.controllers.flow.dummy.DummyController method) (nirs4all.controllers.flow.DummyController method) (nirs4all.controllers.FoldChartController method) (nirs4all.controllers.JaxModelController method) (nirs4all.controllers.models.autogluon_model.AutoGluonModelController method) (nirs4all.controllers.models.AutoGluonModelController method) (nirs4all.controllers.models.base_model.BaseModelController method) (nirs4all.controllers.models.BaseModelController method) (nirs4all.controllers.models.jax_model.JaxModelController method) (nirs4all.controllers.models.JaxModelController method) (nirs4all.controllers.models.meta_model.MetaModelController method) (nirs4all.controllers.models.MetaModelController method) (nirs4all.controllers.models.PyTorchModelController method) (nirs4all.controllers.models.sklearn_model.SklearnModelController method) (nirs4all.controllers.models.SklearnModelController method) (nirs4all.controllers.models.tensorflow_model.TensorFlowModelController method) (nirs4all.controllers.models.TensorFlowModelController method) (nirs4all.controllers.models.torch_model.PyTorchModelController method) (nirs4all.controllers.OperatorController method) (nirs4all.controllers.PyTorchModelController method) (nirs4all.controllers.ResamplerController method) (nirs4all.controllers.SampleAugmentationController method) (nirs4all.controllers.SampleFilterController method) (nirs4all.controllers.SklearnModelController method) (nirs4all.controllers.SpectraChartController method) (nirs4all.controllers.SpectralDistributionController method) (nirs4all.controllers.splitters.fold_file_loader.FoldFileLoaderController method) (nirs4all.controllers.splitters.FoldFileLoaderController method) (nirs4all.controllers.splitters.split.CrossValidatorController method) (nirs4all.controllers.TensorFlowModelController method) (nirs4all.controllers.TransformerMixinController method) (nirs4all.controllers.transforms.transformer.TransformerMixinController method) (nirs4all.controllers.transforms.y_transformer.YTransformerMixinController method) (nirs4all.controllers.YChartController method) (nirs4all.controllers.YTransformerMixinController method) (nirs4all.pipeline.execution.executor.PipelineExecutor method) (nirs4all.pipeline.execution.orchestrator.PipelineOrchestrator method) (nirs4all.pipeline.execution.PipelineExecutor method) (nirs4all.pipeline.execution.PipelineOrchestrator method) (nirs4all.pipeline.steps.step_runner.StepRunner method) (nirs4all.pipeline.steps.StepRunner method)

execute_minimal() (nirs4all.pipeline.execution.executor.PipelineExecutor method) (nirs4all.pipeline.execution.PipelineExecutor method) execution_mode (nirs4all.pipeline.ExecutionStep attribute), [1] (nirs4all.pipeline.MinimalPipelineStep attribute), [1] (nirs4all.pipeline.trace.execution_trace.ExecutionStep attribute), [1] (nirs4all.pipeline.trace.ExecutionStep attribute), [1] (nirs4all.pipeline.trace.extractor.MinimalPipelineStep attribute), [1] (nirs4all.pipeline.trace.MinimalPipelineStep attribute), [1] execution_trace (nirs4all.visualization.branch_diagram.PipelineDiagram attribute) (nirs4all.visualization.pipeline_diagram.PipelineDiagram attribute) (nirs4all.visualization.PipelineDiagram attribute) ExecutionContext (class in nirs4all.pipeline.config) (class in nirs4all.pipeline.config.context) ExecutionPath (class in nirs4all.pipeline.storage.artifacts) (class in nirs4all.pipeline.storage.artifacts.utils) ExecutionStep (class in nirs4all.pipeline) (class in nirs4all.pipeline.trace) (class in nirs4all.pipeline.trace.execution_trace) ExecutionTrace (class in nirs4all.pipeline) (class in nirs4all.pipeline.trace) (class in nirs4all.pipeline.trace.execution_trace) ExecutorBuilder (class in nirs4all.pipeline.execution) (class in nirs4all.pipeline.execution.builder) exit_branch() (nirs4all.pipeline.trace.recorder.TraceRecorder method) (nirs4all.pipeline.trace.TraceRecorder method) (nirs4all.pipeline.TraceRecorder method) exp (nirs4all.data.synthetic.accelerated.AcceleratedArrays attribute) (nirs4all.data.synthetic.AcceleratedArrays attribute) EXPAND (nirs4all.core.logging.events.EventType attribute) (nirs4all.core.logging.EventType attribute) expand() (nirs4all.pipeline.config.generator.CartesianStrategy method) (nirs4all.pipeline.config.generator.ChainStrategy method) (nirs4all.pipeline.config.generator.ExpansionStrategy method) (nirs4all.pipeline.config.generator.GridStrategy method) (nirs4all.pipeline.config.generator.LogRangeStrategy method) (nirs4all.pipeline.config.generator.OrStrategy method) (nirs4all.pipeline.config.generator.RangeStrategy method) (nirs4all.pipeline.config.generator.SampleStrategy method) (nirs4all.pipeline.config.generator.ZipStrategy method) expand_spec() (in module nirs4all.pipeline.config) (in module nirs4all.pipeline.config.generator) expand_spec_iter() (in module nirs4all.pipeline.config.generator) expand_spec_with_choices() (in module nirs4all.pipeline.config.generator) ExpansionStrategy (class in nirs4all.pipeline.config.generator) ExpansionTreeNode (class in nirs4all.pipeline.config.generator) expected_columns (nirs4all.controllers.models.stacking.exceptions.FeatureOrderMismatchError attribute) (nirs4all.controllers.models.stacking.FeatureOrderMismatchError attribute) expected_features (nirs4all.controllers.models.stacking.BranchFeatureAlignmentError attribute) (nirs4all.controllers.models.stacking.exceptions.BranchFeatureAlignmentError attribute) expected_levels (nirs4all.controllers.models.stacking.exceptions.InconsistentLevelError attribute) (nirs4all.controllers.models.stacking.InconsistentLevelError attribute) expected_reps (nirs4all.operators.data.repetition.RepetitionConfig attribute), [1] (nirs4all.operators.data.RepetitionConfig attribute), [1] expected_samples (nirs4all.controllers.models.stacking.DisjointSampleSetsError attribute) (nirs4all.controllers.models.stacking.exceptions.DisjointSampleSetsError attribute) expected_sources (nirs4all.controllers.models.stacking.exceptions.NoSourcePredictionsError attribute) (nirs4all.controllers.models.stacking.NoSourcePredictionsError attribute) explain() (in module nirs4all) (in module nirs4all.api) (in module nirs4all.api.explain) (nirs4all.pipeline.Explainer method) (nirs4all.pipeline.explainer.Explainer method) (nirs4all.pipeline.PipelineRunner method) (nirs4all.pipeline.runner.PipelineRunner method) (nirs4all.PipelineRunner method) explain_model() (nirs4all.visualization.analysis.shap.ShapAnalyzer method) (nirs4all.visualization.analysis.ShapAnalyzer method) Explainer (class in nirs4all.pipeline) (class in nirs4all.pipeline.explainer) explainer (nirs4all.pipeline.config.context.RuntimeContext attribute) (nirs4all.pipeline.config.RuntimeContext attribute) (nirs4all.pipeline.PipelineRunner attribute) (nirs4all.pipeline.runner.PipelineRunner attribute) (nirs4all.PipelineRunner attribute) explainer_type (nirs4all.api.ExplainResult attribute), [1] (nirs4all.api.result.ExplainResult attribute), [1] (nirs4all.ExplainResult attribute), [1] ExplainResult (class in nirs4all) (class in nirs4all.api) (class in nirs4all.api.result) EXPLICIT (nirs4all.operators.data.merge.SelectionStrategy attribute), [1] (nirs4all.operators.data.SelectionStrategy attribute), [1] ExplicitModelSelector (class in nirs4all.operators.models) (class in nirs4all.operators.models.selection) EXPORT (nirs4all.core.logging.events.Phase attribute) (nirs4all.core.logging.Phase attribute) export() (nirs4all.api.result.RunResult method), [1] (nirs4all.api.RunResult method), [1] (nirs4all.data.synthetic.builder.SyntheticDatasetBuilder method) (nirs4all.data.synthetic.SyntheticDatasetBuilder method) (nirs4all.pipeline.bundle.BundleGenerator method) (nirs4all.pipeline.bundle.generator.BundleGenerator method) (nirs4all.pipeline.BundleGenerator method) (nirs4all.pipeline.PipelineRunner method) (nirs4all.pipeline.runner.PipelineRunner method) (nirs4all.PipelineRunner method) (nirs4all.RunResult method), [1] export_best_for_dataset() (nirs4all.pipeline.PipelineRunner method) (nirs4all.pipeline.runner.PipelineRunner method) (nirs4all.pipeline.storage.io.SimulationSaver method) (nirs4all.pipeline.storage.io_exporter.WorkspaceExporter method) (nirs4all.pipeline.storage.SimulationSaver method) (nirs4all.pipeline.storage.WorkspaceExporter method) (nirs4all.pipeline.WorkspaceExporter method) (nirs4all.PipelineRunner method) export_best_prediction() (nirs4all.pipeline.storage.io.SimulationSaver method) (nirs4all.pipeline.storage.io_exporter.WorkspaceExporter method) (nirs4all.pipeline.storage.SimulationSaver method) (nirs4all.pipeline.storage.WorkspaceExporter method) (nirs4all.pipeline.WorkspaceExporter method) export_model() (nirs4all.api.result.RunResult method) (nirs4all.api.RunResult method) (nirs4all.pipeline.PipelineRunner method) (nirs4all.pipeline.runner.PipelineRunner method) (nirs4all.PipelineRunner method) (nirs4all.RunResult method) export_pipeline_full() (nirs4all.pipeline.storage.io.SimulationSaver method) (nirs4all.pipeline.storage.io_exporter.WorkspaceExporter method) (nirs4all.pipeline.storage.SimulationSaver method) (nirs4all.pipeline.storage.WorkspaceExporter method) (nirs4all.pipeline.WorkspaceExporter method) export_presets() (in module nirs4all.pipeline.config.generator) export_template() (nirs4all.pipeline.PipelineLibrary method) (nirs4all.pipeline.storage.library.PipelineLibrary method) (nirs4all.pipeline.storage.PipelineLibrary method) export_to_csv() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.exporter) (nirs4all.data.synthetic.builder.SyntheticDatasetBuilder method) (nirs4all.data.synthetic.SyntheticDatasetBuilder method) export_to_folder() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.exporter) export_to_manifest() (nirs4all.pipeline.storage.artifacts.artifact_registry.ArtifactRegistry method) (nirs4all.pipeline.storage.artifacts.ArtifactRegistry method) ExportConfig (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.exporter) exporter (nirs4all.pipeline.storage.io.SimulationSaver property) (nirs4all.pipeline.storage.SimulationSaver property) extend() (nirs4all.pipeline.storage.artifacts.operator_chain.OperatorChain method) (nirs4all.pipeline.storage.artifacts.OperatorChain method) ExtendedMultiplicativeScatterCorrection (class in nirs4all.operators.transforms.nirs) extra (nirs4all.core.logging.context.RunState attribute), [1] (nirs4all.core.logging.events.LogEvent attribute), [1] (nirs4all.core.logging.LogEvent attribute), [1] (nirs4all.core.logging.RunState attribute), [1] extract() (nirs4all.pipeline.PipelineRunner method) (nirs4all.pipeline.Retrainer method) (nirs4all.pipeline.retrainer.Retrainer method) (nirs4all.pipeline.runner.PipelineRunner method) (nirs4all.pipeline.trace.extractor.TraceBasedExtractor method) (nirs4all.pipeline.trace.TraceBasedExtractor method) (nirs4all.pipeline.TraceBasedExtractor method) (nirs4all.PipelineRunner method) extract_all_generator_choices() (nirs4all.pipeline.storage.manifest_manager.ManifestManager method) (nirs4all.pipeline.storage.ManifestManager method) extract_base_node() (in module nirs4all.pipeline.config.generator) extract_bytes_from_tar() (nirs4all.data.loaders.ArchiveHandler static method) (nirs4all.data.loaders.base.ArchiveHandler static method) extract_bytes_from_zip() (nirs4all.data.loaders.ArchiveHandler static method) (nirs4all.data.loaders.base.ArchiveHandler static method) extract_classname_from_config() (nirs4all.controllers.models.components.identifier_generator.ModelIdentifierGenerator method) (nirs4all.controllers.models.components.ModelIdentifierGenerator method) extract_constraints() (in module nirs4all.pipeline.config.generator) extract_core_name() (nirs4all.controllers.models.components.identifier_generator.ModelIdentifierGenerator method) (nirs4all.controllers.models.components.ModelIdentifierGenerator method) extract_features() (nirs4all.controllers.models.stacking.classification.ClassificationFeatureExtractor method) (nirs4all.controllers.models.stacking.ClassificationFeatureExtractor method) extract_fold_id_from_artifact_id() (in module nirs4all.pipeline.storage.artifacts) (in module nirs4all.pipeline.storage.artifacts.utils) extract_for_branch() (nirs4all.pipeline.trace.extractor.TraceBasedExtractor method) (nirs4all.pipeline.trace.TraceBasedExtractor method) (nirs4all.pipeline.TraceBasedExtractor method) extract_for_branch_name() (nirs4all.pipeline.trace.extractor.TraceBasedExtractor method) (nirs4all.pipeline.trace.TraceBasedExtractor method) (nirs4all.pipeline.TraceBasedExtractor method) extract_for_step() (nirs4all.pipeline.trace.extractor.TraceBasedExtractor method) (nirs4all.pipeline.trace.TraceBasedExtractor method) (nirs4all.pipeline.TraceBasedExtractor method) extract_from_tar() (nirs4all.data.loaders.ArchiveHandler static method) (nirs4all.data.loaders.base.ArchiveHandler static method) extract_from_zip() (nirs4all.data.loaders.ArchiveHandler static method) (nirs4all.data.loaders.base.ArchiveHandler static method) extract_generator_choice() (nirs4all.pipeline.storage.manifest_manager.ManifestManager method) (nirs4all.pipeline.storage.ManifestManager method) extract_metadata() (in module nirs4all.pipeline.config.generator) extract_metric_values() (nirs4all.visualization.chart_utils.predictions_adapter.PredictionsAdapter method) (nirs4all.visualization.chart_utils.PredictionsAdapter method) extract_modifiers() (in module nirs4all.pipeline.config.generator) extract_or_choices() (in module nirs4all.pipeline.config.generator) extract_pipeline_id_from_artifact_id() (in module nirs4all.pipeline.storage.artifacts) (in module nirs4all.pipeline.storage.artifacts.utils) extract_range_spec() (in module nirs4all.pipeline.config.generator) extract_tags() (in module nirs4all.pipeline.config.generator) extract_top_preprocessings() (nirs4all.pipeline.storage.manifest_manager.ManifestManager method) (nirs4all.pipeline.storage.ManifestManager method) extract_y_from_x() (nirs4all.data.RoleAssigner method) (nirs4all.data.selection.role_assigner.RoleAssigner method) (nirs4all.data.selection.RoleAssigner method) ExtractedPipeline (class in nirs4all.pipeline) (class in nirs4all.pipeline.retrainer)

F

F_ (nirs4all.operators.models.OKLMPLS attribute) (nirs4all.operators.models.sklearn.OKLMPLS attribute) (nirs4all.operators.models.sklearn.oklmpls.OKLMPLS attribute) FABRY_PEROT (nirs4all.data.synthetic.instruments.MonochromatorType attribute) (nirs4all.data.synthetic.MonochromatorType attribute) fat_set() (in module nirs4all.operators.transforms) (in module nirs4all.operators.transforms.presets) FCKPLS (class in nirs4all.operators.models) (class in nirs4all.operators.models.sklearn) (class in nirs4all.operators.models.sklearn.fckpls) feature_branches (nirs4all.operators.data.merge.MergeConfig attribute), [1] (nirs4all.operators.data.MergeConfig attribute), [1] feature_columns (nirs4all.controllers.models.stacking.MetaModelArtifact attribute), [1] (nirs4all.controllers.models.stacking.serialization.MetaModelArtifact attribute), [1] (nirs4all.pipeline.storage.artifacts.MetaModelConfig attribute), [1] (nirs4all.pipeline.storage.artifacts.types.MetaModelConfig attribute), [1] feature_dim (nirs4all.controllers.data.merge.BranchAnalysisResult attribute), [1] (nirs4all.controllers.data.merge.DisjointMergeMetadata attribute), [1] (nirs4all.operators.data.merge.DisjointMergeMetadata attribute), [1] feature_dims (nirs4all.controllers.data.merge.AsymmetryReport attribute), [1] feature_index (nirs4all.controllers.models.stacking.serialization.SourceModelReference attribute), [1] (nirs4all.controllers.models.stacking.SourceModelReference attribute), [1] feature_indices (nirs4all.data.selection.role_assigner.RoleAssignmentResult attribute), [1] feature_method (nirs4all.data.aggregation.AggregationConfig attribute), [1] (nirs4all.data.aggregation.aggregator.AggregationConfig attribute), [1] feature_name_pattern (nirs4all.controllers.models.ReconstructorConfig attribute), [1] (nirs4all.controllers.models.stacking.config.ReconstructorConfig attribute), [1] (nirs4all.controllers.models.stacking.ReconstructorConfig attribute), [1] feature_names (nirs4all.api.ExplainResult attribute), [1] (nirs4all.api.result.ExplainResult attribute), [1] (nirs4all.controllers.models.ReconstructionResult attribute), [1] (nirs4all.controllers.models.stacking.classification.MetaFeatureInfo attribute), [1] (nirs4all.controllers.models.stacking.MetaFeatureInfo attribute), [1] (nirs4all.controllers.models.stacking.ReconstructionResult attribute), [1] (nirs4all.controllers.models.stacking.reconstructor.ReconstructionResult attribute), [1] (nirs4all.ExplainResult attribute), [1] feature_to_model (nirs4all.controllers.models.stacking.classification.MetaFeatureInfo attribute), [1] (nirs4all.controllers.models.stacking.MetaFeatureInfo attribute), [1] feature_to_model_mapping (nirs4all.controllers.models.stacking.MetaModelArtifact attribute) (nirs4all.controllers.models.stacking.serialization.MetaModelArtifact attribute) FeatureAugmentationController (class in nirs4all.controllers) (class in nirs4all.controllers.data) (class in nirs4all.controllers.data.feature_augmentation) FeatureConfig (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.config) FeatureLayout (class in nirs4all.data) FeatureNameGenerator (class in nirs4all.controllers.models.stacking) (class in nirs4all.controllers.models.stacking.classification) FeatureOrderMismatchError, [1] Features (class in nirs4all.data.features) features (nirs4all.data.ColumnConfig attribute) (nirs4all.data.dataset.SpectroDataset attribute) (nirs4all.data.schema.ColumnConfig attribute) (nirs4all.data.schema.config.ColumnConfig attribute) (nirs4all.data.selection.role_assigner.RoleAssignmentResult attribute), [1] (nirs4all.data.SpectroDataset attribute) (nirs4all.data.synthetic.config.SyntheticDatasetConfig attribute), [1] (nirs4all.data.synthetic.SyntheticDatasetConfig attribute), [1] FEATURES (nirs4all.operators.data.merge.MergeMode attribute), [1] (nirs4all.operators.data.MergeMode attribute), [1] features_processings() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.SpectroDataset method) features_shape (nirs4all.visualization.pipeline_diagram.PipelineNode attribute), [1] features_sources() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.SpectroDataset method) FeatureSelectionController (class in nirs4all.controllers.data) (class in nirs4all.controllers.data.feature_selection) FeatureSource (class in nirs4all.data) featurizer_ (nirs4all.operators.models.FCKPLS attribute) (nirs4all.operators.models.sklearn.FCKPLS attribute) (nirs4all.operators.models.sklearn.fckpls.FCKPLS attribute) FIBER_OPTIC (nirs4all.data.synthetic.measurement_modes.MeasurementMode attribute) (nirs4all.data.synthetic.MeasurementMode attribute) field (nirs4all.data.schema.validation.ValidationError attribute), [1] (nirs4all.data.schema.validation.ValidationWarning attribute), [1] (nirs4all.data.schema.validation.validators.ValidationError attribute), [1] (nirs4all.data.schema.validation.validators.ValidationWarning attribute), [1] (nirs4all.data.schema.ValidationError attribute), [1] (nirs4all.data.schema.ValidationWarning attribute), [1] (nirs4all.data.ValidationError attribute), [1] (nirs4all.data.ValidationWarning attribute), [1] figsize_large (nirs4all.visualization.charts.ChartConfig attribute), [1] (nirs4all.visualization.charts.config.ChartConfig attribute), [1] figsize_medium (nirs4all.visualization.charts.ChartConfig attribute), [1] (nirs4all.visualization.charts.config.ChartConfig attribute), [1] figsize_small (nirs4all.visualization.charts.ChartConfig attribute), [1] (nirs4all.visualization.charts.config.ChartConfig attribute), [1] file (nirs4all.data.schema.config.FoldConfig attribute) (nirs4all.data.schema.FoldConfig attribute) FILE (nirs4all.data.schema.validation.error_codes.ErrorCategory attribute) (nirs4all.data.schema.validation.ErrorCategory attribute) file_extension (nirs4all.data.synthetic.ExportConfig attribute), [1] (nirs4all.data.synthetic.exporter.ExportConfig attribute), [1] file_not_found() (nirs4all.data.schema.validation.DiagnosticBuilder method) (nirs4all.data.schema.validation.error_codes.DiagnosticBuilder method) FileConfig (class in nirs4all.data) (class in nirs4all.data.schema) (class in nirs4all.data.schema.config) FileFormatter (class in nirs4all.core.logging) (class in nirs4all.core.logging.formatters) FileLoader (class in nirs4all.data.loaders) (class in nirs4all.data.loaders.base) FileLoadError, [1] files (nirs4all.data.DatasetConfigSchema attribute) (nirs4all.data.schema.config.DatasetConfigSchema attribute) (nirs4all.data.schema.config.SourceConfig attribute) (nirs4all.data.schema.config.VariationConfig attribute) (nirs4all.data.schema.DatasetConfigSchema attribute) (nirs4all.data.schema.SourceConfig attribute) (nirs4all.data.schema.VariationConfig attribute) FilesParser (class in nirs4all.data.parsers) (class in nirs4all.data.parsers.files_parser) FILLED_ASCII (nirs4all.core.logging.progress.ProgressBar attribute) (nirs4all.core.logging.ProgressBar attribute) FILLED_UNICODE (nirs4all.core.logging.progress.ProgressBar attribute) (nirs4all.core.logging.ProgressBar attribute) FILM (nirs4all.data.synthetic.MatrixType attribute) (nirs4all.data.synthetic.prior.MatrixType attribute) FILTER (nirs4all.data.synthetic.InstrumentCategory attribute) (nirs4all.data.synthetic.instruments.InstrumentCategory attribute) filter() (nirs4all.api.result.RunResult method), [1] (nirs4all.api.RunResult method), [1] (nirs4all.RunResult method), [1] filter_branch() (nirs4all.pipeline.storage.artifacts.operator_chain.OperatorChain method) (nirs4all.pipeline.storage.artifacts.OperatorChain method) filter_by_branch() (nirs4all.data.Predictions method) (nirs4all.data.predictions.Predictions method) filter_by_criteria() (nirs4all.data.Predictions method) (nirs4all.data.predictions.Predictions method) filter_by_level() (nirs4all.controllers.models.stacking.multilevel.MultiLevelValidator method) (nirs4all.controllers.models.stacking.MultiLevelValidator method) filter_name (nirs4all.operators.filters.FilterResult attribute), [1] (nirs4all.operators.filters.report.FilterResult attribute), [1] filter_params() (nirs4all.controllers.models.factory.ModelFactory static method) filter_predictions() (nirs4all.data.Predictions method) (nirs4all.data.predictions.Predictions method) filter_results (nirs4all.operators.filters.FilteringReport attribute), [1] (nirs4all.operators.filters.report.FilteringReport attribute), [1] filter_source() (nirs4all.pipeline.storage.artifacts.operator_chain.OperatorChain method) (nirs4all.pipeline.storage.artifacts.OperatorChain method) filter_step() (nirs4all.pipeline.storage.artifacts.operator_chain.OperatorChain method) (nirs4all.pipeline.storage.artifacts.OperatorChain method) FILTER_WHEEL (nirs4all.data.synthetic.instruments.MonochromatorType attribute) (nirs4all.data.synthetic.MonochromatorType attribute) FilteringReport (class in nirs4all.operators.filters) (class in nirs4all.operators.filters.report) FilteringReportGenerator (class in nirs4all.operators.filters) (class in nirs4all.operators.filters.report) FilterResult (class in nirs4all.operators.filters) (class in nirs4all.operators.filters.report) filters (nirs4all.operators.filters.base.CompositeFilter attribute) (nirs4all.operators.filters.CompositeFilter attribute) final_exclusion_rate (nirs4all.operators.filters.FilteringReport property) (nirs4all.operators.filters.report.FilteringReport property) finalize() (nirs4all.pipeline.ExecutionTrace method) (nirs4all.pipeline.trace.execution_trace.ExecutionTrace method) (nirs4all.pipeline.trace.ExecutionTrace method) (nirs4all.pipeline.trace.recorder.TraceRecorder method) (nirs4all.pipeline.trace.TraceRecorder method) (nirs4all.pipeline.TraceRecorder method) find_artifact_by_custom_name() (nirs4all.pipeline.storage.artifacts.artifact_loader.ArtifactLoader method) (nirs4all.pipeline.storage.artifacts.ArtifactLoader method) find_best_for_config() (nirs4all.pipeline.storage.io_resolver.TargetResolver method) (nirs4all.pipeline.storage.TargetResolver method) (nirs4all.pipeline.TargetResolver method) find_orphaned_artifacts() (nirs4all.pipeline.storage.artifacts.artifact_registry.ArtifactRegistry method) (nirs4all.pipeline.storage.artifacts.ArtifactRegistry method) find_prediction_by_id() (nirs4all.pipeline.storage.io_resolver.TargetResolver method) (nirs4all.pipeline.storage.TargetResolver method) (nirs4all.pipeline.TargetResolver method) FINETUNE (nirs4all.pipeline.retrainer.RetrainMode attribute), [1] (nirs4all.pipeline.RetrainMode attribute), [1] finetune() (nirs4all.controllers.models.base_model.BaseModelController method) (nirs4all.controllers.models.BaseModelController method) finetune_space (nirs4all.operators.models.meta.MetaModel attribute) (nirs4all.operators.models.MetaModel attribute) FIRST (nirs4all.data.aggregation.AggregationMethod attribute) (nirs4all.data.aggregation.aggregator.AggregationMethod attribute) first_derivative() (in module nirs4all.operators.transforms) (in module nirs4all.operators.transforms.nirs) FirstDerivative (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.nirs) fit() (nirs4all.analysis.selector.TransferPreprocessingSelector method) (nirs4all.analysis.TransferPreprocessingSelector method) (nirs4all.data.synthetic.fitter.RealDataFitter method) (nirs4all.data.synthetic.RealDataFitter method) (nirs4all.operators.Augmenter method) (nirs4all.operators.Baseline method) (nirs4all.operators.CropTransformer method) (nirs4all.operators.Derivate method) (nirs4all.operators.Detrend method) (nirs4all.operators.filters.base.CompositeFilter method) (nirs4all.operators.filters.base.SampleFilter method) (nirs4all.operators.filters.CompositeFilter method) (nirs4all.operators.filters.high_leverage.HighLeverageFilter method) (nirs4all.operators.filters.HighLeverageFilter method) (nirs4all.operators.filters.metadata.MetadataFilter method) (nirs4all.operators.filters.MetadataFilter method) (nirs4all.operators.filters.SampleFilter method) (nirs4all.operators.filters.spectral_quality.SpectralQualityFilter method) (nirs4all.operators.filters.SpectralQualityFilter method) (nirs4all.operators.filters.x_outlier.XOutlierFilter method) (nirs4all.operators.filters.XOutlierFilter method) (nirs4all.operators.filters.y_outlier.YOutlierFilter method) (nirs4all.operators.filters.YOutlierFilter method) (nirs4all.operators.Gaussian method) (nirs4all.operators.LocalStandardNormalVariate method) (nirs4all.operators.models.DiPLS method) (nirs4all.operators.models.FCKPLS method) (nirs4all.operators.models.FractionalConvFeaturizer method) (nirs4all.operators.models.IdentityFeaturizer method) (nirs4all.operators.models.IKPLS method) (nirs4all.operators.models.IntervalPLS method) (nirs4all.operators.models.KernelPLS method) (nirs4all.operators.models.KOPLS method) (nirs4all.operators.models.LWPLS method) (nirs4all.operators.models.MBPLS method) (nirs4all.operators.models.OKLMPLS method) (nirs4all.operators.models.OPLS method) (nirs4all.operators.models.OPLSDA method) (nirs4all.operators.models.PLSDA method) (nirs4all.operators.models.PolynomialFeaturizer method) (nirs4all.operators.models.RBFFeaturizer method) (nirs4all.operators.models.RecursivePLS method) (nirs4all.operators.models.RobustPLS method) (nirs4all.operators.models.SIMPLS method) (nirs4all.operators.models.sklearn.DiPLS method) (nirs4all.operators.models.sklearn.dipls.DiPLS method) (nirs4all.operators.models.sklearn.FCKPLS method) (nirs4all.operators.models.sklearn.fckpls.FCKPLS method) (nirs4all.operators.models.sklearn.fckpls.FractionalConvFeaturizer method) (nirs4all.operators.models.sklearn.FractionalConvFeaturizer method) (nirs4all.operators.models.sklearn.IdentityFeaturizer method) (nirs4all.operators.models.sklearn.IKPLS method) (nirs4all.operators.models.sklearn.ikpls.IKPLS method) (nirs4all.operators.models.sklearn.IntervalPLS method) (nirs4all.operators.models.sklearn.ipls.IntervalPLS method) (nirs4all.operators.models.sklearn.KernelPLS method) (nirs4all.operators.models.sklearn.KOPLS method) (nirs4all.operators.models.sklearn.kopls.KOPLS method) (nirs4all.operators.models.sklearn.LWPLS method) (nirs4all.operators.models.sklearn.lwpls.LWPLS method) (nirs4all.operators.models.sklearn.MBPLS method) (nirs4all.operators.models.sklearn.mbpls.MBPLS method) (nirs4all.operators.models.sklearn.nlpls.KernelPLS method) (nirs4all.operators.models.sklearn.OKLMPLS method) (nirs4all.operators.models.sklearn.oklmpls.IdentityFeaturizer method) (nirs4all.operators.models.sklearn.oklmpls.OKLMPLS method) (nirs4all.operators.models.sklearn.oklmpls.PolynomialFeaturizer method) (nirs4all.operators.models.sklearn.oklmpls.RBFFeaturizer method) (nirs4all.operators.models.sklearn.OPLS method) (nirs4all.operators.models.sklearn.opls.OPLS method) (nirs4all.operators.models.sklearn.OPLSDA method) (nirs4all.operators.models.sklearn.oplsda.OPLSDA method) (nirs4all.operators.models.sklearn.PLSDA method) (nirs4all.operators.models.sklearn.plsda.PLSDA method) (nirs4all.operators.models.sklearn.PolynomialFeaturizer method) (nirs4all.operators.models.sklearn.RBFFeaturizer method) (nirs4all.operators.models.sklearn.recursive_pls.RecursivePLS method) (nirs4all.operators.models.sklearn.RecursivePLS method) (nirs4all.operators.models.sklearn.robust_pls.RobustPLS method) (nirs4all.operators.models.sklearn.RobustPLS method) (nirs4all.operators.models.sklearn.SIMPLS method) (nirs4all.operators.models.sklearn.simpls.SIMPLS method) (nirs4all.operators.models.sklearn.SparsePLS method) (nirs4all.operators.models.sklearn.sparsepls.SparsePLS method) (nirs4all.operators.models.SparsePLS method) (nirs4all.operators.MultiplicativeScatterCorrection method) (nirs4all.operators.Normalize method) (nirs4all.operators.ResampleTransformer method) (nirs4all.operators.RobustStandardNormalVariate method) (nirs4all.operators.SampleFilter method) (nirs4all.operators.SavitzkyGolay method) (nirs4all.operators.SimpleScale method) (nirs4all.operators.StandardNormalVariate method) (nirs4all.operators.transforms.Augmenter method) (nirs4all.operators.transforms.Baseline method) (nirs4all.operators.transforms.CARS method) (nirs4all.operators.transforms.CropTransformer method) (nirs4all.operators.transforms.Derivate method) (nirs4all.operators.transforms.Detrend method) (nirs4all.operators.transforms.feature_selection.CARS method) (nirs4all.operators.transforms.feature_selection.MCUVE method) (nirs4all.operators.transforms.features.CropTransformer method) (nirs4all.operators.transforms.features.FlattenPreprocessing method) (nirs4all.operators.transforms.features.ResampleTransformer method) (nirs4all.operators.transforms.FirstDerivative method) (nirs4all.operators.transforms.FlattenPreprocessing method) (nirs4all.operators.transforms.FractionToPercent method) (nirs4all.operators.transforms.FromAbsorbance method) (nirs4all.operators.transforms.Gaussian method) (nirs4all.operators.transforms.IntegerKBinsDiscretizer method) (nirs4all.operators.transforms.KubelkaMunk method) (nirs4all.operators.transforms.LocalMixupAugmenter method) (nirs4all.operators.transforms.LocalStandardNormalVariate method) (nirs4all.operators.transforms.LogTransform method) (nirs4all.operators.transforms.MCUVE method) (nirs4all.operators.transforms.MultiplicativeScatterCorrection method) (nirs4all.operators.transforms.nirs.AreaNormalization method) (nirs4all.operators.transforms.nirs.ExtendedMultiplicativeScatterCorrection method) (nirs4all.operators.transforms.nirs.FirstDerivative method) (nirs4all.operators.transforms.nirs.LogTransform method) (nirs4all.operators.transforms.nirs.MultiplicativeScatterCorrection method) (nirs4all.operators.transforms.nirs.PyBaselineCorrection method) (nirs4all.operators.transforms.nirs.ReflectanceToAbsorbance method) (nirs4all.operators.transforms.nirs.SavitzkyGolay method) (nirs4all.operators.transforms.nirs.SecondDerivative method) (nirs4all.operators.transforms.nirs.Wavelet method) (nirs4all.operators.transforms.nirs.WaveletFeatures method) (nirs4all.operators.transforms.nirs.WaveletPCA method) (nirs4all.operators.transforms.nirs.WaveletSVD method) (nirs4all.operators.transforms.Normalize method) (nirs4all.operators.transforms.PercentToFraction method) (nirs4all.operators.transforms.PyBaselineCorrection method) (nirs4all.operators.transforms.RangeDiscretizer method) (nirs4all.operators.transforms.ReflectanceToAbsorbance method) (nirs4all.operators.transforms.Resampler method) (nirs4all.operators.transforms.resampler.Resampler method) (nirs4all.operators.transforms.ResampleTransformer method) (nirs4all.operators.transforms.RobustStandardNormalVariate method) (nirs4all.operators.transforms.SavitzkyGolay method) (nirs4all.operators.transforms.scalers.Derivate method) (nirs4all.operators.transforms.scalers.LocalStandardNormalVariate method) (nirs4all.operators.transforms.scalers.Normalize method) (nirs4all.operators.transforms.scalers.RobustStandardNormalVariate method) (nirs4all.operators.transforms.scalers.SimpleScale method) (nirs4all.operators.transforms.scalers.StandardNormalVariate method) (nirs4all.operators.transforms.ScatterSimulationMSC method) (nirs4all.operators.transforms.SecondDerivative method) (nirs4all.operators.transforms.signal.Baseline method) (nirs4all.operators.transforms.signal.Detrend method) (nirs4all.operators.transforms.signal.Gaussian method) (nirs4all.operators.transforms.signal_conversion.FractionToPercent method) (nirs4all.operators.transforms.signal_conversion.FromAbsorbance method) (nirs4all.operators.transforms.signal_conversion.KubelkaMunk method) (nirs4all.operators.transforms.signal_conversion.PercentToFraction method) (nirs4all.operators.transforms.signal_conversion.SignalTypeConverter method) (nirs4all.operators.transforms.signal_conversion.ToAbsorbance method) (nirs4all.operators.transforms.SignalTypeConverter method) (nirs4all.operators.transforms.SimpleScale method) (nirs4all.operators.transforms.StandardNormalVariate method) (nirs4all.operators.transforms.targets.IntegerKBinsDiscretizer method) (nirs4all.operators.transforms.targets.RangeDiscretizer method) (nirs4all.operators.transforms.ToAbsorbance method) (nirs4all.operators.transforms.Wavelet method) (nirs4all.operators.transforms.WaveletFeatures method) (nirs4all.operators.transforms.WaveletPCA method) (nirs4all.operators.transforms.WaveletSVD method) (nirs4all.operators.Wavelet method) (nirs4all.operators.YOutlierFilter method) (nirs4all.sklearn.NIRSPipeline method) (nirs4all.sklearn.pipeline.NIRSPipeline method) (nirs4all.visualization.analysis.PreprocPCAEvaluator method) (nirs4all.visualization.analysis.transfer.PreprocPCAEvaluator method)

fit_from_configs() (nirs4all.analysis.selector.TransferPreprocessingSelector method) (nirs4all.analysis.TransferPreprocessingSelector method) fit_from_path() (nirs4all.data.synthetic.fitter.RealDataFitter method) (nirs4all.data.synthetic.RealDataFitter method) fit_to() (nirs4all.data.synthetic.builder.SyntheticDatasetBuilder method) (nirs4all.data.synthetic.SyntheticDatasetBuilder method) fit_to_real_data() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.fitter) fit_transform() (nirs4all.operators.Augmenter method) (nirs4all.operators.filters.base.SampleFilter method) (nirs4all.operators.filters.SampleFilter method) (nirs4all.operators.LocalStandardNormalVariate method) (nirs4all.operators.RobustStandardNormalVariate method) (nirs4all.operators.SampleFilter method) (nirs4all.operators.StandardNormalVariate method) (nirs4all.operators.transforms.Augmenter method) (nirs4all.operators.transforms.LocalStandardNormalVariate method) (nirs4all.operators.transforms.RobustStandardNormalVariate method) (nirs4all.operators.transforms.scalers.LocalStandardNormalVariate method) (nirs4all.operators.transforms.scalers.RobustStandardNormalVariate method) (nirs4all.operators.transforms.scalers.StandardNormalVariate method) (nirs4all.operators.transforms.StandardNormalVariate method) fitted_params (nirs4all.data.synthetic.fitter.RealDataFitter attribute) (nirs4all.data.synthetic.RealDataFitter attribute) FittedParameters (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.fitter) FLAT_2D (nirs4all.data.FeatureLayout attribute) FLAT_2D_INTERLEAVED (nirs4all.data.FeatureLayout attribute) FLATTEN (nirs4all.operators.data.merge.SourceIncompatibleStrategy attribute), [1] (nirs4all.operators.data.SourceIncompatibleStrategy attribute), [1] flatten() (nirs4all.api.PredictResult method), [1] (nirs4all.api.result.PredictResult method), [1] (nirs4all.PredictResult method), [1] FlattenPreprocessing (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.features) flicker_corner_freq (nirs4all.data.synthetic.detectors.NoiseModelConfig attribute), [1] (nirs4all.data.synthetic.NoiseModelConfig attribute), [1] flicker_noise_enabled (nirs4all.data.synthetic.detectors.NoiseModelConfig attribute), [1] (nirs4all.data.synthetic.NoiseModelConfig attribute), [1] float_headers() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.SpectroDataset method) float_precision (nirs4all.data.synthetic.ExportConfig attribute), [1] (nirs4all.data.synthetic.exporter.ExportConfig attribute), [1] flush_to() (nirs4all.core.logging.BufferedHandler method) (nirs4all.core.logging.handlers.BufferedHandler method) FOLD (nirs4all.data.schema.validation.error_codes.ErrorCategory attribute) (nirs4all.data.schema.validation.ErrorCategory attribute) fold_artifact_ids (nirs4all.pipeline.StepArtifacts attribute), [1] (nirs4all.pipeline.trace.execution_trace.StepArtifacts attribute), [1] (nirs4all.pipeline.trace.StepArtifacts attribute), [1] fold_id (nirs4all.controllers.models.stacking.serialization.SourceModelReference attribute), [1] (nirs4all.controllers.models.stacking.SourceModelReference attribute), [1] (nirs4all.data.PredictionResult property) (nirs4all.data.predictions.PredictionResult property) (nirs4all.operators.models.ModelCandidate attribute), [1] (nirs4all.operators.models.selection.ModelCandidate attribute), [1] (nirs4all.pipeline.config.context.DataSelector attribute), [1] (nirs4all.pipeline.config.DataSelector attribute), [1] (nirs4all.pipeline.storage.artifacts.ArtifactRecord attribute), [1] (nirs4all.pipeline.storage.artifacts.ExecutionPath attribute), [1] (nirs4all.pipeline.storage.artifacts.operator_chain.OperatorNode attribute), [1] (nirs4all.pipeline.storage.artifacts.OperatorNode attribute), [1] (nirs4all.pipeline.storage.artifacts.types.ArtifactRecord attribute), [1] (nirs4all.pipeline.storage.artifacts.utils.ExecutionPath attribute), [1] fold_idx (nirs4all.controllers.models.components.identifier_generator.ModelIdentifiers attribute) (nirs4all.controllers.models.components.ModelIdentifiers attribute) fold_level() (nirs4all.core.logging.MultiLevelProgress method) (nirs4all.core.logging.progress.MultiLevelProgress method) fold_strategy (nirs4all.pipeline.bundle.BundleMetadata attribute), [1] (nirs4all.pipeline.bundle.loader.BundleMetadata attribute), [1] (nirs4all.pipeline.BundleMetadata attribute), [1] (nirs4all.pipeline.ResolvedPrediction attribute), [1] (nirs4all.pipeline.resolver.ResolvedPrediction attribute), [1] fold_structures (nirs4all.controllers.models.stacking.exceptions.FoldMismatchAcrossBranchesError attribute) (nirs4all.controllers.models.stacking.FoldMismatchAcrossBranchesError attribute) fold_validator (nirs4all.controllers.models.stacking.reconstructor.TrainingSetReconstructor attribute) (nirs4all.controllers.models.stacking.TrainingSetReconstructor attribute) (nirs4all.controllers.models.TrainingSetReconstructor attribute) fold_weights (nirs4all.pipeline.bundle.BundleLoader attribute) (nirs4all.pipeline.bundle.loader.BundleArtifactProvider attribute) (nirs4all.pipeline.bundle.loader.BundleLoader attribute) (nirs4all.pipeline.BundleLoader attribute) (nirs4all.pipeline.config.context.MapArtifactProvider attribute) (nirs4all.pipeline.config.MapArtifactProvider attribute) (nirs4all.pipeline.ExecutionTrace attribute), [1] (nirs4all.pipeline.MapArtifactProvider attribute) (nirs4all.pipeline.MinimalPipeline attribute), [1] (nirs4all.pipeline.ResolvedPrediction attribute), [1] (nirs4all.pipeline.resolver.ResolvedPrediction attribute), [1] (nirs4all.pipeline.trace.execution_trace.ExecutionTrace attribute), [1] (nirs4all.pipeline.trace.ExecutionTrace attribute), [1] (nirs4all.pipeline.trace.extractor.MinimalPipeline attribute), [1] (nirs4all.pipeline.trace.MinimalPipeline attribute), [1] (nirs4all.sklearn.NIRSPipeline attribute) (nirs4all.sklearn.NIRSPipeline property) (nirs4all.sklearn.pipeline.NIRSPipeline attribute) (nirs4all.sklearn.pipeline.NIRSPipeline property) FoldAlignmentValidator (class in nirs4all.controllers.models) (class in nirs4all.controllers.models.stacking) (class in nirs4all.controllers.models.stacking.reconstructor) FoldChartController (class in nirs4all.controllers) (class in nirs4all.controllers.charts.folds) FoldConfig (class in nirs4all.data.schema) (class in nirs4all.data.schema.config) FoldDefinition (class in nirs4all.data.schema) (class in nirs4all.data.schema.config) FOLDER (nirs4all.pipeline.resolver.SourceType attribute), [1] (nirs4all.pipeline.SourceType attribute), [1] folder_to_name() (in module nirs4all.data.config_parser) FolderParser (class in nirs4all.data.parsers) (class in nirs4all.data.parsers.folder_parser) FoldFileLoaderController (class in nirs4all.controllers.splitters) (class in nirs4all.controllers.splitters.fold_file_loader) FoldFileParser (class in nirs4all.controllers.splitters) (class in nirs4all.controllers.splitters.fold_file_loader) FoldMismatchAcrossBranchesError, [1] folds (nirs4all.data.dataset.SpectroDataset attribute) (nirs4all.data.dataset.SpectroDataset property) (nirs4all.data.DatasetConfigSchema attribute) (nirs4all.data.schema.config.DatasetConfigSchema attribute) (nirs4all.data.schema.config.FoldConfig attribute) (nirs4all.data.schema.DatasetConfigSchema attribute) (nirs4all.data.schema.FoldConfig attribute) (nirs4all.data.SpectroDataset attribute) (nirs4all.data.SpectroDataset property) FoldStrategy (class in nirs4all.pipeline) (class in nirs4all.pipeline.resolver) font_family (nirs4all.visualization.charts.ChartConfig attribute), [1] (nirs4all.visualization.charts.config.ChartConfig attribute), [1] FOOD (nirs4all.data.synthetic.BenchmarkDomain attribute) (nirs4all.data.synthetic.benchmarks.BenchmarkDomain attribute) (nirs4all.data.synthetic.DomainCategory attribute) (nirs4all.data.synthetic.domains.DomainCategory attribute) force_layout (nirs4all.pipeline.steps.ParsedStep attribute), [1] (nirs4all.pipeline.steps.parser.ParsedStep attribute), [1] format (nirs4all.data.schema.config.FoldConfig attribute) (nirs4all.data.schema.FoldConfig attribute) (nirs4all.data.synthetic.ExportConfig attribute), [1] (nirs4all.data.synthetic.exporter.ExportConfig attribute), [1] (nirs4all.pipeline.execution.ArtifactMeta attribute), [1] (nirs4all.pipeline.execution.result.ArtifactMeta attribute), [1] (nirs4all.pipeline.storage.artifacts.artifact_persistence.ArtifactMeta attribute) (nirs4all.pipeline.storage.artifacts.ArtifactRecord attribute), [1] (nirs4all.pipeline.storage.artifacts.types.ArtifactRecord attribute), [1] format() (nirs4all.core.logging.ConsoleFormatter method) (nirs4all.core.logging.FileFormatter method) (nirs4all.core.logging.formatters.ConsoleFormatter method) (nirs4all.core.logging.formatters.FileFormatter method) (nirs4all.core.logging.formatters.JsonFormatter method) (nirs4all.core.logging.JsonFormatter method) format_config_table() (in module nirs4all.pipeline.config.generator) format_duration() (in module nirs4all.core.logging) (in module nirs4all.core.logging.formatters) format_errors() (nirs4all.controllers.models.stacking.reconstructor.ValidationResult method) (nirs4all.controllers.models.stacking.ValidationResult method) (nirs4all.controllers.models.ValidationResult method) format_number() (in module nirs4all.core.logging) (in module nirs4all.core.logging.formatters) format_pipeline_name() (in module nirs4all.analysis) (in module nirs4all.analysis.transfer_utils) format_run_footer() (in module nirs4all.core.logging) (in module nirs4all.core.logging.formatters) format_run_header() (in module nirs4all.core.logging) (in module nirs4all.core.logging.formatters) format_scores() (nirs4all.controllers.models.components.score_calculator.ScoreCalculator method) (nirs4all.controllers.models.components.ScoreCalculator method) (nirs4all.controllers.models.utilities.ModelControllerUtils static method) format_table() (in module nirs4all.core.logging) (in module nirs4all.core.logging.formatters) format_version (nirs4all.pipeline.execution.ArtifactMeta attribute), [1] (nirs4all.pipeline.execution.result.ArtifactMeta attribute), [1] (nirs4all.pipeline.storage.artifacts.artifact_persistence.ArtifactMeta attribute) (nirs4all.pipeline.storage.artifacts.ArtifactRecord attribute), [1] (nirs4all.pipeline.storage.artifacts.types.ArtifactRecord attribute), [1] format_warnings() (nirs4all.controllers.models.stacking.reconstructor.ValidationResult method) (nirs4all.controllers.models.stacking.ValidationResult method) (nirs4all.controllers.models.ValidationResult method) FormatNotSupportedError, [1] found_levels (nirs4all.controllers.models.stacking.exceptions.InconsistentLevelError attribute) (nirs4all.controllers.models.stacking.InconsistentLevelError attribute) found_samples (nirs4all.controllers.models.stacking.DisjointSampleSetsError attribute) (nirs4all.controllers.models.stacking.exceptions.DisjointSampleSetsError attribute) fractional_kernel_1d() (in module nirs4all.operators.models.sklearn.fckpls) fractional_kernel_grrunwald_letnikov() (in module nirs4all.operators.models.sklearn.fckpls) FractionalConvFeaturizer (class in nirs4all.operators.models) (class in nirs4all.operators.models.sklearn) (class in nirs4all.operators.models.sklearn.fckpls) FractionalPLS (in module nirs4all.operators.models) (in module nirs4all.operators.models.sklearn) (in module nirs4all.operators.models.sklearn.fckpls) FractionToPercent (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.signal_conversion) FRAMES_ASCII (nirs4all.core.logging.progress.SpinnerProgress attribute) (nirs4all.core.logging.SpinnerProgress attribute) FRAMES_UNICODE (nirs4all.core.logging.progress.SpinnerProgress attribute) (nirs4all.core.logging.SpinnerProgress attribute) framework() (in module nirs4all) (in module nirs4all.utils) (in module nirs4all.utils.backend) free_water_fraction (nirs4all.data.synthetic.environmental.MoistureConfig attribute), [1] (nirs4all.data.synthetic.MoistureConfig attribute), [1] freeze_layers (nirs4all.pipeline.RetrainConfig attribute), [1] (nirs4all.pipeline.retrainer.RetrainConfig attribute), [1] from_artifact_id_v3() (nirs4all.pipeline.storage.artifacts.ExecutionPath class method) (nirs4all.pipeline.storage.artifacts.utils.ExecutionPath class method) from_bundle() (nirs4all.sklearn.classifier.NIRSPipelineClassifier class method) (nirs4all.sklearn.NIRSPipeline class method) (nirs4all.sklearn.NIRSPipelineClassifier class method) (nirs4all.sklearn.pipeline.NIRSPipeline class method) from_bytes() (in module nirs4all.pipeline.storage.artifacts.artifact_persistence) from_config() (nirs4all.data.aggregation.AggregationConfig class method) (nirs4all.data.aggregation.aggregator.AggregationConfig class method) (nirs4all.data.synthetic.builder.SyntheticDatasetBuilder class method) (nirs4all.data.synthetic.SyntheticDatasetBuilder class method) from_dict() (nirs4all.controllers.data.merge.DisjointMergeMetadata class method) (nirs4all.controllers.data.merge.SourceMergeConfig class method) (nirs4all.controllers.models.stacking.MetaModelArtifact class method) (nirs4all.controllers.models.stacking.serialization.MetaModelArtifact class method) (nirs4all.controllers.models.stacking.serialization.SourceModelReference class method) (nirs4all.controllers.models.stacking.SourceModelReference class method) (nirs4all.data.DatasetConfigSchema class method) (nirs4all.data.schema.config.DatasetConfigSchema class method) (nirs4all.data.schema.DatasetConfigSchema class method) (nirs4all.data.synthetic.FittedParameters class method) (nirs4all.data.synthetic.fitter.FittedParameters class method) (nirs4all.data.synthetic.SourceConfig class method) (nirs4all.data.synthetic.sources.SourceConfig class method) (nirs4all.operators.data.merge.DisjointMergeMetadata class method) (nirs4all.operators.data.merge.MergeConfig class method) (nirs4all.operators.data.merge.SourceBranchConfig class method) (nirs4all.operators.data.merge.SourceMergeConfig class method) (nirs4all.operators.data.MergeConfig class method) (nirs4all.operators.data.repetition.RepetitionConfig class method) (nirs4all.operators.data.RepetitionConfig class method) (nirs4all.operators.data.SourceMergeConfig class method) (nirs4all.pipeline.bundle.BundleMetadata class method) (nirs4all.pipeline.bundle.loader.BundleMetadata class method) (nirs4all.pipeline.BundleMetadata class method) (nirs4all.pipeline.ExecutionStep class method) (nirs4all.pipeline.ExecutionTrace class method) (nirs4all.pipeline.StepArtifacts class method) (nirs4all.pipeline.storage.artifacts.ArtifactRecord class method) (nirs4all.pipeline.storage.artifacts.MetaModelConfig class method) (nirs4all.pipeline.storage.artifacts.operator_chain.OperatorChain class method) (nirs4all.pipeline.storage.artifacts.operator_chain.OperatorNode class method) (nirs4all.pipeline.storage.artifacts.OperatorChain class method) (nirs4all.pipeline.storage.artifacts.OperatorNode class method) (nirs4all.pipeline.storage.artifacts.types.ArtifactRecord class method) (nirs4all.pipeline.storage.artifacts.types.MetaModelConfig class method) (nirs4all.pipeline.trace.execution_trace.ExecutionStep class method) (nirs4all.pipeline.trace.execution_trace.ExecutionTrace class method) (nirs4all.pipeline.trace.execution_trace.StepArtifacts class method) (nirs4all.pipeline.trace.ExecutionStep class method) (nirs4all.pipeline.trace.ExecutionTrace class method) (nirs4all.pipeline.trace.StepArtifacts class method) from_json() (nirs4all.controllers.models.stacking.MetaModelArtifact class method) (nirs4all.controllers.models.stacking.serialization.MetaModelArtifact class method) from_key() (nirs4all.pipeline.storage.artifacts.operator_chain.OperatorNode class method) (nirs4all.pipeline.storage.artifacts.OperatorNode class method) from_manifest() (nirs4all.pipeline.storage.artifacts.artifact_loader.ArtifactLoader class method) (nirs4all.pipeline.storage.artifacts.ArtifactLoader class method) from_path() (nirs4all.pipeline.storage.artifacts.operator_chain.OperatorChain class method) (nirs4all.pipeline.storage.artifacts.OperatorChain class method) from_predefined() (nirs4all.data.synthetic.ComponentLibrary class method) (nirs4all.data.synthetic.components.ComponentLibrary class method) from_result() (nirs4all.sklearn.classifier.NIRSPipelineClassifier class method) (nirs4all.sklearn.NIRSPipeline class method) (nirs4all.sklearn.NIRSPipelineClassifier class method) (nirs4all.sklearn.pipeline.NIRSPipeline class method) from_step_value() (nirs4all.operators.data.repetition.RepetitionConfig class method) (nirs4all.operators.data.RepetitionConfig class method) from_string() (nirs4all.data.signal_type.SignalType class method) (nirs4all.data.SignalType class method) from_template() (in module nirs4all.api.generate) from_trace() (nirs4all.visualization.branch_diagram.PipelineDiagram class method) (nirs4all.visualization.pipeline_diagram.PipelineDiagram class method) (nirs4all.visualization.PipelineDiagram class method) FromAbsorbance (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.signal_conversion) FT (nirs4all.data.synthetic.instruments.MonochromatorType attribute) (nirs4all.data.synthetic.MonochromatorType attribute) FT_NIR (nirs4all.data.synthetic.InstrumentCategory attribute) (nirs4all.data.synthetic.instruments.InstrumentCategory attribute) FULL (nirs4all.pipeline.retrainer.RetrainMode attribute), [1] (nirs4all.pipeline.RetrainMode attribute), [1] full_name (nirs4all.data.synthetic.BenchmarkDatasetInfo attribute), [1] (nirs4all.data.synthetic.benchmarks.BenchmarkDatasetInfo attribute), [1] full_scale (nirs4all.data.synthetic.detectors.NoiseModelConfig attribute), [1] (nirs4all.data.synthetic.NoiseModelConfig attribute), [1] functional_groups (nirs4all.data.synthetic.procedural.ProceduralComponentConfig attribute), [1] (nirs4all.data.synthetic.ProceduralComponentConfig attribute), [1] FunctionalGroupType (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.procedural)

G

gain (nirs4all.data.synthetic.DetectorConfig attribute), [1] (nirs4all.data.synthetic.detectors.DetectorConfig attribute), [1] (nirs4all.data.synthetic.instruments.SensorConfig attribute), [1] (nirs4all.data.synthetic.SensorConfig attribute), [1] gain_std (nirs4all.data.synthetic.BatchEffectConfig attribute), [1] (nirs4all.data.synthetic.config.BatchEffectConfig attribute), [1] gamma (nirs4all.data.synthetic.components.NIRBand attribute), [1] (nirs4all.data.synthetic.NIRBand attribute), [1] Gaussian (class in nirs4all.operators) (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.signal) gaussian() (in module nirs4all.operators) (in module nirs4all.operators.transforms) (in module nirs4all.operators.transforms.signal) GaussianAdditiveNoise (class in nirs4all.operators.transforms) GaussianSmoothingJitter (class in nirs4all.operators.transforms) GEL (nirs4all.data.synthetic.MatrixType attribute) (nirs4all.data.synthetic.prior.MatrixType attribute) GENERAL (nirs4all.data.synthetic.BenchmarkDomain attribute) (nirs4all.data.synthetic.benchmarks.BenchmarkDomain attribute) GENERATE (nirs4all.core.logging.events.Phase attribute) (nirs4all.core.logging.Phase attribute) generate() (in module nirs4all.api.generate) (nirs4all.controllers.models.components.identifier_generator.ModelIdentifierGenerator method) (nirs4all.controllers.models.components.ModelIdentifierGenerator method) (nirs4all.data.synthetic.generator.SyntheticNIRSGenerator method) (nirs4all.data.synthetic.metadata.MetadataGenerator method) (nirs4all.data.synthetic.MetadataGenerator method) (nirs4all.data.synthetic.MultiSourceGenerator method) (nirs4all.data.synthetic.scattering.ScatteringCoefficientGenerator method) (nirs4all.data.synthetic.ScatteringCoefficientGenerator method) (nirs4all.data.synthetic.sources.MultiSourceGenerator method) (nirs4all.data.synthetic.SyntheticNIRSGenerator method) generate_all_variations() (nirs4all.data.synthetic.CSVVariationGenerator method) (nirs4all.data.synthetic.exporter.CSVVariationGenerator method) generate_artifact_id_v3() (in module nirs4all.pipeline.storage.artifacts) (in module nirs4all.pipeline.storage.artifacts.operator_chain) generate_augmentation_combinations() (in module nirs4all.analysis) (in module nirs4all.analysis.transfer_utils) generate_batch() (nirs4all.data.synthetic.accelerated.AcceleratedGenerator method) (nirs4all.data.synthetic.AcceleratedGenerator method) generate_batch_effects() (nirs4all.data.synthetic.generator.SyntheticNIRSGenerator method) (nirs4all.data.synthetic.SyntheticNIRSGenerator method) generate_best_score_tab_report() (nirs4all.visualization.reports.TabReportManager static method) generate_binary_key() (nirs4all.controllers.models.components.identifier_generator.ModelIdentifierGenerator method) (nirs4all.controllers.models.components.ModelIdentifierGenerator method) generate_classification_targets() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.targets) generate_component() (nirs4all.data.synthetic.procedural.ProceduralComponentGenerator method) (nirs4all.data.synthetic.ProceduralComponentGenerator method) generate_concentrations() (nirs4all.data.synthetic.generator.SyntheticNIRSGenerator method) (nirs4all.data.synthetic.SyntheticNIRSGenerator method) generate_filename() (in module nirs4all.pipeline.storage.artifacts) (in module nirs4all.pipeline.storage.artifacts.utils) generate_for_particle_sizes() (nirs4all.data.synthetic.scattering.ScatteringCoefficientGenerator method) (nirs4all.data.synthetic.ScatteringCoefficientGenerator method) generate_from_functional_groups() (nirs4all.data.synthetic.procedural.ProceduralComponentGenerator method) (nirs4all.data.synthetic.ProceduralComponentGenerator method) generate_from_indexer() (nirs4all.operators.filters.FilteringReportGenerator method) (nirs4all.operators.filters.report.FilteringReportGenerator method) generate_id() (nirs4all.pipeline.storage.artifacts.artifact_registry.ArtifactRegistry method) (nirs4all.pipeline.storage.artifacts.ArtifactRegistry method) generate_library() (nirs4all.data.synthetic.procedural.ProceduralComponentGenerator method) (nirs4all.data.synthetic.ProceduralComponentGenerator method) generate_multi_source() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.sources) generate_names() (nirs4all.controllers.models.stacking.classification.FeatureNameGenerator method) (nirs4all.controllers.models.stacking.FeatureNameGenerator method) generate_object_augmentation_combinations() (in module nirs4all.analysis) (in module nirs4all.analysis.transfer_utils) generate_object_stacked_pipelines() (in module nirs4all.analysis) (in module nirs4all.analysis.transfer_utils) generate_particle_sizes() (nirs4all.data.synthetic.ParticleSizeSimulator method) (nirs4all.data.synthetic.scattering.ParticleSizeSimulator method) generate_random_library() (nirs4all.data.synthetic.ComponentLibrary method) (nirs4all.data.synthetic.components.ComponentLibrary method) generate_regression_targets() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.targets) generate_report() (nirs4all.data.PredictionAnalyzer method) (nirs4all.visualization.PredictionAnalyzer method) (nirs4all.visualization.predictions.PredictionAnalyzer method) generate_sample_ids (nirs4all.data.synthetic.builder.BuilderState attribute) (nirs4all.data.synthetic.config.MetadataConfig attribute), [1] (nirs4all.data.synthetic.MetadataConfig attribute), [1] generate_sample_metadata() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.metadata) generate_scattering_coefficients() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.scattering) (nirs4all.data.synthetic.measurement_modes.MeasurementModeSimulator method) (nirs4all.data.synthetic.MeasurementModeSimulator method) (nirs4all.data.synthetic.scattering.ScatteringEffectsSimulator method) (nirs4all.data.synthetic.ScatteringEffectsSimulator method) generate_spectra_batch_accelerated() (in module nirs4all.data.synthetic.accelerated) generate_stacked_pipelines() (in module nirs4all.analysis) (in module nirs4all.analysis.transfer_utils) generate_top_k_stacked_pipelines() (in module nirs4all.analysis) (in module nirs4all.analysis.transfer_utils) generate_variant() (nirs4all.data.synthetic.procedural.ProceduralComponentGenerator method) (nirs4all.data.synthetic.ProceduralComponentGenerator method) generate_voigt_profiles() (nirs4all.data.synthetic.accelerated.AcceleratedGenerator method) (nirs4all.data.synthetic.AcceleratedGenerator method) generate_voigt_profiles_accelerated() (in module nirs4all.data.synthetic.accelerated) GENERATOR (nirs4all.controllers.models.stacking.branch_validator.BranchType attribute) (nirs4all.controllers.models.stacking.BranchType attribute) generator_count (nirs4all.pipeline.config.generator.ValidationResult attribute), [1] generator_type (nirs4all.controllers.models.stacking.exceptions.GeneratorSyntaxStackingWarning attribute) (nirs4all.controllers.models.stacking.GeneratorSyntaxStackingWarning attribute) GeneratorSyntaxStackingWarning, [1] geometry (nirs4all.data.synthetic.measurement_modes.ReflectanceConfig attribute), [1] (nirs4all.data.synthetic.ReflectanceConfig attribute), [1] get() (nirs4all.data.metadata.Metadata method) (nirs4all.data.performance.cache.DataCache method) (nirs4all.data.performance.DataCache method) (nirs4all.data.PredictionResultsList method) (nirs4all.data.predictions.PredictionResultsList method) (nirs4all.data.schema.validation.error_codes.ErrorRegistry class method) (nirs4all.data.schema.validation.ErrorRegistry class method) (nirs4all.pipeline.storage.artifacts.artifact_loader.LRUCache method) (nirs4all.visualization.prediction_cache.PredictionCache method) get_acceleration_speedup_estimate() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.accelerated) get_aggregation_strategy() (nirs4all.operators.data.BranchPredictionConfig method) (nirs4all.operators.data.merge.BranchPredictionConfig method) get_all_chain_paths() (nirs4all.pipeline.MinimalPipeline method) (nirs4all.pipeline.trace.extractor.MinimalPipeline method) (nirs4all.pipeline.trace.MinimalPipeline method) get_all_levels() (nirs4all.controllers.models.stacking.multilevel.MultiLevelValidator method) (nirs4all.controllers.models.stacking.MultiLevelValidator method) get_all_predictions_metadata() (nirs4all.visualization.chart_utils.predictions_adapter.PredictionsAdapter method) (nirs4all.visualization.chart_utils.PredictionsAdapter method) get_all_records() (nirs4all.pipeline.storage.artifacts.artifact_loader.ArtifactLoader method) (nirs4all.pipeline.storage.artifacts.artifact_registry.ArtifactRegistry method) (nirs4all.pipeline.storage.artifacts.ArtifactLoader method) (nirs4all.pipeline.storage.artifacts.ArtifactRegistry method) get_all_source_mappings() (nirs4all.operators.data.merge.SourceBranchConfig method) get_all_zones_wavelength() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.wavenumber) get_artifact() (nirs4all.pipeline.ArtifactProvider method) (nirs4all.pipeline.bundle.loader.BundleArtifactProvider method) (nirs4all.pipeline.config.ArtifactProvider method) (nirs4all.pipeline.config.context.ArtifactProvider method) (nirs4all.pipeline.config.context.LoaderArtifactProvider method) (nirs4all.pipeline.config.context.MapArtifactProvider method) (nirs4all.pipeline.config.LoaderArtifactProvider method) (nirs4all.pipeline.config.MapArtifactProvider method) (nirs4all.pipeline.LoaderArtifactProvider method) (nirs4all.pipeline.MapArtifactProvider method) (nirs4all.pipeline.minimal_predictor.MinimalArtifactProvider method) (nirs4all.pipeline.MinimalArtifactProvider method) (nirs4all.pipeline.RetrainArtifactProvider method) (nirs4all.pipeline.retrainer.RetrainArtifactProvider method) get_artifact_by_chain() (nirs4all.pipeline.ArtifactProvider method) (nirs4all.pipeline.config.ArtifactProvider method) (nirs4all.pipeline.config.context.ArtifactProvider method) (nirs4all.pipeline.config.context.LoaderArtifactProvider method) (nirs4all.pipeline.config.LoaderArtifactProvider method) (nirs4all.pipeline.LoaderArtifactProvider method) (nirs4all.pipeline.MinimalPipeline method) (nirs4all.pipeline.MinimalPipelineStep method) (nirs4all.pipeline.StepArtifacts method) (nirs4all.pipeline.trace.execution_trace.StepArtifacts method) (nirs4all.pipeline.trace.extractor.MinimalPipeline method) (nirs4all.pipeline.trace.extractor.MinimalPipelineStep method) (nirs4all.pipeline.trace.MinimalPipeline method) (nirs4all.pipeline.trace.MinimalPipelineStep method) (nirs4all.pipeline.trace.StepArtifacts method) get_artifact_ids() (nirs4all.pipeline.ExecutionTrace method) (nirs4all.pipeline.MinimalPipeline method) (nirs4all.pipeline.MinimalPipelineStep method) (nirs4all.pipeline.trace.execution_trace.ExecutionTrace method) (nirs4all.pipeline.trace.ExecutionTrace method) (nirs4all.pipeline.trace.extractor.MinimalPipeline method) (nirs4all.pipeline.trace.extractor.MinimalPipelineStep method) (nirs4all.pipeline.trace.MinimalPipeline method) (nirs4all.pipeline.trace.MinimalPipelineStep method) get_artifact_path() (nirs4all.pipeline.storage.manifest_manager.ManifestManager method) (nirs4all.pipeline.storage.ManifestManager method) get_artifact_size() (in module nirs4all.pipeline.storage.artifacts.artifact_persistence) get_artifacts_by_chain() (nirs4all.pipeline.MinimalPipelineStep method) (nirs4all.pipeline.trace.extractor.MinimalPipelineStep method) (nirs4all.pipeline.trace.MinimalPipelineStep method) get_artifacts_by_chain_filter() (nirs4all.pipeline.storage.artifacts.artifact_loader.ArtifactLoader method) (nirs4all.pipeline.storage.artifacts.ArtifactLoader method) get_artifacts_by_step() (nirs4all.pipeline.ExecutionTrace method) (nirs4all.pipeline.trace.execution_trace.ExecutionTrace method) (nirs4all.pipeline.trace.ExecutionTrace method) get_artifacts_for_branch() (nirs4all.pipeline.StepArtifacts method) (nirs4all.pipeline.trace.execution_trace.StepArtifacts method) (nirs4all.pipeline.trace.StepArtifacts method) get_artifacts_for_chain_prefix() (nirs4all.pipeline.ArtifactProvider method) (nirs4all.pipeline.config.ArtifactProvider method) (nirs4all.pipeline.config.context.ArtifactProvider method) (nirs4all.pipeline.config.context.LoaderArtifactProvider method) (nirs4all.pipeline.config.LoaderArtifactProvider method) (nirs4all.pipeline.LoaderArtifactProvider method) get_artifacts_for_source() (nirs4all.pipeline.StepArtifacts method) (nirs4all.pipeline.trace.execution_trace.StepArtifacts method) (nirs4all.pipeline.trace.StepArtifacts method) get_artifacts_for_step() (nirs4all.pipeline.ArtifactProvider method) (nirs4all.pipeline.bundle.loader.BundleArtifactProvider method) (nirs4all.pipeline.config.ArtifactProvider method) (nirs4all.pipeline.config.context.ArtifactProvider method) (nirs4all.pipeline.config.context.LoaderArtifactProvider method) (nirs4all.pipeline.config.context.MapArtifactProvider method) (nirs4all.pipeline.config.LoaderArtifactProvider method) (nirs4all.pipeline.config.MapArtifactProvider method) (nirs4all.pipeline.LoaderArtifactProvider method) (nirs4all.pipeline.MapArtifactProvider method) (nirs4all.pipeline.minimal_predictor.MinimalArtifactProvider method) (nirs4all.pipeline.MinimalArtifactProvider method) (nirs4all.pipeline.MinimalPipeline method) (nirs4all.pipeline.RetrainArtifactProvider method) (nirs4all.pipeline.retrainer.RetrainArtifactProvider method) (nirs4all.pipeline.storage.artifacts.artifact_registry.ArtifactRegistry method) (nirs4all.pipeline.storage.artifacts.ArtifactRegistry method) (nirs4all.pipeline.trace.extractor.MinimalPipeline method) (nirs4all.pipeline.trace.MinimalPipeline method) get_artifacts_list() (nirs4all.pipeline.storage.manifest_manager.ManifestManager method) (nirs4all.pipeline.storage.ManifestManager method) get_augmented_for_origins() (nirs4all.data.indexer.Indexer method) get_available_metrics() (in module nirs4all.core.metrics) get_axis_label() (in module nirs4all.utils) (in module nirs4all.utils.header_units) get_backend_info() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.accelerated) (in module nirs4all.utils) (in module nirs4all.utils.backend) get_base_path() (nirs4all.data.loaders.base.FileLoader class method) (nirs4all.data.loaders.FileLoader class method) get_base_preprocessings() (in module nirs4all.analysis) (in module nirs4all.analysis.transfer_utils) get_benchmark_info() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.benchmarks) get_benchmark_spectral_properties() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.benchmarks) get_best() (nirs4all.data.Predictions method) (nirs4all.data.predictions.Predictions method) get_best_score_metric() (nirs4all.controllers.models.utilities.ModelControllerUtils static method) get_binaries_path() (in module nirs4all.pipeline.storage.artifacts) (in module nirs4all.pipeline.storage.artifacts.utils) get_branch_ids() (nirs4all.data.PredictionAnalyzer method) (nirs4all.visualization.analysis.branch.BranchAnalyzer method) (nirs4all.visualization.analysis.BranchAnalyzer method) (nirs4all.visualization.BranchAnalyzer method) (nirs4all.visualization.PredictionAnalyzer method) (nirs4all.visualization.predictions.PredictionAnalyzer method) get_branch_names() (nirs4all.visualization.analysis.branch.BranchAnalyzer method) (nirs4all.visualization.analysis.BranchAnalyzer method) (nirs4all.visualization.BranchAnalyzer method) get_branch_path() (nirs4all.pipeline.storage.artifacts.operator_chain.OperatorChain method) (nirs4all.pipeline.storage.artifacts.OperatorChain method) get_branch_path_str() (nirs4all.pipeline.storage.artifacts.ArtifactRecord method) (nirs4all.pipeline.storage.artifacts.types.ArtifactRecord method) get_branch_summary() (nirs4all.controllers.data.merge.DisjointMergeMetadata method) (nirs4all.operators.data.merge.DisjointMergeMetadata method) get_branches() (nirs4all.data.PredictionAnalyzer method) (nirs4all.visualization.PredictionAnalyzer method) (nirs4all.visualization.predictions.PredictionAnalyzer method) get_by_chain() (nirs4all.pipeline.storage.artifacts.artifact_registry.ArtifactRegistry method) (nirs4all.pipeline.storage.artifacts.ArtifactRegistry method) get_cache_info() (nirs4all.pipeline.storage.artifacts.artifact_loader.ArtifactLoader method) (nirs4all.pipeline.storage.artifacts.ArtifactLoader method) get_cache_stats() (nirs4all.data.PredictionAnalyzer method) (nirs4all.data.Predictions method) (nirs4all.data.predictions.Predictions method) (nirs4all.visualization.PredictionAnalyzer method) (nirs4all.visualization.predictions.PredictionAnalyzer method) get_cached_predictions() (nirs4all.data.PredictionAnalyzer method) (nirs4all.visualization.PredictionAnalyzer method) (nirs4all.visualization.predictions.PredictionAnalyzer method) get_chain_for_artifact() (nirs4all.pipeline.bundle.BundleLoader method) (nirs4all.pipeline.bundle.loader.BundleLoader method) (nirs4all.pipeline.BundleLoader method) get_chain_prefix() (nirs4all.pipeline.storage.artifacts.artifact_registry.ArtifactRegistry method) (nirs4all.pipeline.storage.artifacts.ArtifactRegistry method) get_column() (nirs4all.data.metadata.Metadata method) get_column_mapping_summary() (nirs4all.controllers.data.merge.DisjointMergeMetadata method) (nirs4all.operators.data.merge.DisjointMergeMetadata method) get_column_values() (nirs4all.data.indexer.Indexer method) get_combined_features() (nirs4all.data.synthetic.MultiSourceResult method) (nirs4all.data.synthetic.sources.MultiSourceResult method) get_component_weights() (nirs4all.data.synthetic.DomainConfig method) (nirs4all.data.synthetic.domains.DomainConfig method) get_config() (in module nirs4all.core.logging) (in module nirs4all.core.logging.config) (nirs4all.data.synthetic.builder.SyntheticDatasetBuilder method) (nirs4all.data.synthetic.SyntheticDatasetBuilder method) get_configs() (nirs4all.data.Predictions method) (nirs4all.data.predictions.Predictions method) get_controller_type() (nirs4all.operators.models.base.BaseModelOperator method) (nirs4all.operators.models.BaseModelOperator method) (nirs4all.operators.models.meta.MetaModel method) (nirs4all.operators.models.MetaModel method) get_cross_branch_sources() (nirs4all.controllers.models.stacking.crossbranch.CrossBranchValidator method) (nirs4all.controllers.models.stacking.CrossBranchValidator method) get_cross_dataset_summary() (nirs4all.visualization.analysis.PreprocPCAEvaluator method) (nirs4all.visualization.analysis.transfer.PreprocPCAEvaluator method) get_current_state() (in module nirs4all.core.logging) (in module nirs4all.core.logging.context) get_current_step_index() (nirs4all.pipeline.trace.recorder.TraceRecorder method) (nirs4all.pipeline.trace.TraceRecorder method) (nirs4all.pipeline.TraceRecorder method) get_data() (nirs4all.data.partition.partition_assigner.PartitionResult method) (nirs4all.data.partition.PartitionResult method) (nirs4all.data.PartitionResult method) get_dataset() (nirs4all.data.config.DatasetConfigs method) (nirs4all.data.DatasetConfigs method) get_dataset_at() (nirs4all.data.config.DatasetConfigs method) (nirs4all.data.DatasetConfigs method) get_datasets() (nirs4all.api.result.RunResult method), [1] (nirs4all.api.RunResult method), [1] (nirs4all.data.config.DatasetConfigs method) (nirs4all.data.DatasetConfigs method) (nirs4all.data.Predictions method) (nirs4all.data.predictions.Predictions method) (nirs4all.RunResult method), [1] get_datasets_by_domain() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.benchmarks) get_default_loss() (nirs4all.controllers.models.utilities.ModelControllerUtils static method) get_default_metrics() (in module nirs4all.core.metrics) (nirs4all.controllers.models.utilities.ModelControllerUtils static method) get_default_noise_config() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.detectors) get_dependencies() (nirs4all.pipeline.storage.artifacts.artifact_registry.ArtifactRegistry method) (nirs4all.pipeline.storage.artifacts.artifact_registry.DependencyGraph method) (nirs4all.pipeline.storage.artifacts.ArtifactRegistry method) (nirs4all.pipeline.storage.artifacts.DependencyGraph method) get_dependents() (nirs4all.pipeline.storage.artifacts.artifact_registry.DependencyGraph method) (nirs4all.pipeline.storage.artifacts.DependencyGraph method) get_detector_response() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.detectors) get_detector_wavelength_range() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.detectors) get_disjoint_branch_info() (in module nirs4all.controllers.models.stacking) (in module nirs4all.controllers.models.stacking.branch_validator) get_domain_compatible_instruments() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.prior) get_domain_components() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.domains) get_domain_config() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.domains) get_domain_weight() (nirs4all.data.synthetic.NIRSPriorConfig method) (nirs4all.data.synthetic.prior.NIRSPriorConfig method) get_domains_for_component() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.domains) get_effective_layout() (nirs4all.controllers.models.base_model.BaseModelController method) (nirs4all.controllers.models.BaseModelController method) get_effective_params() (nirs4all.data.DatasetConfigSchema method) (nirs4all.data.schema.config.DatasetConfigSchema method) (nirs4all.data.schema.DatasetConfigSchema method) get_emsc_basis() (nirs4all.data.synthetic.EMSCTransformSimulator method) (nirs4all.data.synthetic.scattering.EMSCTransformSimulator method) get_entry_partitions() (nirs4all.data.Predictions method) (nirs4all.data.predictions.Predictions method) get_excluded_indices() (nirs4all.operators.filters.base.SampleFilter method) (nirs4all.operators.filters.SampleFilter method) (nirs4all.operators.SampleFilter method) get_excluded_samples() (nirs4all.data.indexer.Indexer method) get_exclusion_summary() (nirs4all.data.indexer.Indexer method) get_execution_trace() (nirs4all.pipeline.config.context.RuntimeContext method) (nirs4all.pipeline.config.RuntimeContext method) get_expansion_tree() (in module nirs4all.pipeline.config.generator) get_feature_branches() (nirs4all.operators.data.merge.MergeConfig method) (nirs4all.operators.data.MergeConfig method) get_feature_importance() (nirs4all.api.ExplainResult method), [1] (nirs4all.api.result.ExplainResult method), [1] (nirs4all.ExplainResult method), [1] (nirs4all.visualization.analysis.shap.ShapAnalyzer method) (nirs4all.visualization.analysis.ShapAnalyzer method) get_feature_importance_mapping() (nirs4all.controllers.models.stacking.classification.FeatureNameGenerator method) (nirs4all.controllers.models.stacking.FeatureNameGenerator method) get_feature_names_out() (nirs4all.operators.transforms.CARS method) (nirs4all.operators.transforms.feature_selection.CARS method) (nirs4all.operators.transforms.feature_selection.MCUVE method) (nirs4all.operators.transforms.MCUVE method) (nirs4all.operators.transforms.nirs.WaveletFeatures method) (nirs4all.operators.transforms.nirs.WaveletPCA method) (nirs4all.operators.transforms.nirs.WaveletSVD method) (nirs4all.operators.transforms.Resampler method) (nirs4all.operators.transforms.resampler.Resampler method) (nirs4all.operators.transforms.WaveletFeatures method) (nirs4all.operators.transforms.WaveletPCA method) (nirs4all.operators.transforms.WaveletSVD method) get_figsize() (nirs4all.visualization.charts.ChartConfig method) (nirs4all.visualization.charts.config.ChartConfig method) get_filter_info() (nirs4all.operators.models.FCKPLS method) (nirs4all.operators.models.sklearn.FCKPLS method) (nirs4all.operators.models.sklearn.fckpls.FCKPLS method) get_filter_stats() (nirs4all.operators.filters.base.CompositeFilter method) (nirs4all.operators.filters.base.SampleFilter method) (nirs4all.operators.filters.CompositeFilter method) (nirs4all.operators.filters.high_leverage.HighLeverageFilter method) (nirs4all.operators.filters.HighLeverageFilter method) (nirs4all.operators.filters.metadata.MetadataFilter method) (nirs4all.operators.filters.MetadataFilter method) (nirs4all.operators.filters.SampleFilter method) (nirs4all.operators.filters.spectral_quality.SpectralQualityFilter method) (nirs4all.operators.filters.SpectralQualityFilter method) (nirs4all.operators.filters.x_outlier.XOutlierFilter method) (nirs4all.operators.filters.XOutlierFilter method) (nirs4all.operators.filters.y_outlier.YOutlierFilter method) (nirs4all.operators.filters.YOutlierFilter method) (nirs4all.operators.SampleFilter method) (nirs4all.operators.YOutlierFilter method) get_finetune_params() (nirs4all.operators.models.meta.MetaModel method) (nirs4all.operators.models.MetaModel method) get_fold_artifact_ids() (nirs4all.pipeline.ExecutionTrace method) (nirs4all.pipeline.trace.execution_trace.ExecutionTrace method) (nirs4all.pipeline.trace.ExecutionTrace method) get_fold_artifacts() (nirs4all.pipeline.ArtifactProvider method) (nirs4all.pipeline.bundle.loader.BundleArtifactProvider method) (nirs4all.pipeline.config.ArtifactProvider method) (nirs4all.pipeline.config.context.ArtifactProvider method) (nirs4all.pipeline.config.context.LoaderArtifactProvider method) (nirs4all.pipeline.config.context.MapArtifactProvider method) (nirs4all.pipeline.config.LoaderArtifactProvider method) (nirs4all.pipeline.config.MapArtifactProvider method) (nirs4all.pipeline.LoaderArtifactProvider method) (nirs4all.pipeline.MapArtifactProvider method) (nirs4all.pipeline.minimal_predictor.MinimalArtifactProvider method) (nirs4all.pipeline.MinimalArtifactProvider method) (nirs4all.pipeline.RetrainArtifactProvider method) (nirs4all.pipeline.retrainer.RetrainArtifactProvider method) get_fold_models() (nirs4all.pipeline.storage.artifacts.artifact_registry.ArtifactRegistry method) (nirs4all.pipeline.storage.artifacts.ArtifactRegistry method) get_fold_str() (nirs4all.pipeline.storage.artifacts.ArtifactRecord method) (nirs4all.pipeline.storage.artifacts.types.ArtifactRecord method) get_fold_weights() (nirs4all.pipeline.bundle.loader.BundleArtifactProvider method) (nirs4all.pipeline.config.context.MapArtifactProvider method) (nirs4all.pipeline.config.MapArtifactProvider method) (nirs4all.pipeline.MapArtifactProvider method) (nirs4all.pipeline.minimal_predictor.MinimalArtifactProvider method) (nirs4all.pipeline.MinimalArtifactProvider method) get_folds() (nirs4all.data.Predictions method) (nirs4all.data.predictions.Predictions method) get_fractional_features() (nirs4all.operators.models.FCKPLS method) (nirs4all.operators.models.sklearn.FCKPLS method) (nirs4all.operators.models.sklearn.fckpls.FCKPLS method)

get_gpu_info() (in module nirs4all.utils) (in module nirs4all.utils.backend) get_hash() (nirs4all.pipeline.config.pipeline_config.PipelineConfigs static method) (nirs4all.pipeline.config.PipelineConfigs static method) (nirs4all.pipeline.PipelineConfigs static method) (nirs4all.PipelineConfigs static method) get_incompatible_strategy() (nirs4all.controllers.data.merge.SourceMergeConfig method) (nirs4all.operators.data.merge.SourceMergeConfig method) (nirs4all.operators.data.SourceMergeConfig method) get_indices() (nirs4all.data.partition.partition_assigner.PartitionResult method) (nirs4all.data.partition.PartitionResult method) (nirs4all.data.PartitionResult method) get_instance() (nirs4all.data.loaders.base.LoaderRegistry class method) (nirs4all.data.loaders.LoaderRegistry class method) get_instrument_archetype() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.instruments) get_instrument_typical_modes() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.prior) get_instruments_by_category() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.instruments) get_interval_info() (nirs4all.operators.models.IntervalPLS method) (nirs4all.operators.models.sklearn.IntervalPLS method) (nirs4all.operators.models.sklearn.ipls.IntervalPLS method) get_json_file_path() (nirs4all.core.logging.handlers.RotatingRunFileHandler method) (nirs4all.core.logging.RotatingRunFileHandler method) get_kept_indices() (nirs4all.operators.filters.base.SampleFilter method) (nirs4all.operators.filters.SampleFilter method) (nirs4all.operators.SampleFilter method) get_kernel_info() (nirs4all.operators.models.FractionalConvFeaturizer method) (nirs4all.operators.models.sklearn.fckpls.FractionalConvFeaturizer method) (nirs4all.operators.models.sklearn.FractionalConvFeaturizer method) get_last_node() (nirs4all.pipeline.storage.artifacts.operator_chain.OperatorChain method) (nirs4all.pipeline.storage.artifacts.OperatorChain method) get_latest_execution_trace() (nirs4all.pipeline.storage.manifest_manager.ManifestManager method) (nirs4all.pipeline.storage.ManifestManager method) get_leverages() (nirs4all.operators.filters.high_leverage.HighLeverageFilter method) (nirs4all.operators.filters.HighLeverageFilter method) get_loader() (nirs4all.data.loaders.base.LoaderRegistry method) (nirs4all.data.loaders.LoaderRegistry method) get_loader_for_file() (in module nirs4all.data.loaders) get_log_file_path() (nirs4all.core.logging.handlers.RotatingRunFileHandler method) (nirs4all.core.logging.RotatingRunFileHandler method) get_logger() (in module nirs4all.core.logging) (in module nirs4all.core.logging.config) get_mask() (nirs4all.operators.filters.base.CompositeFilter method) (nirs4all.operators.filters.base.SampleFilter method) (nirs4all.operators.filters.CompositeFilter method) (nirs4all.operators.filters.high_leverage.HighLeverageFilter method) (nirs4all.operators.filters.HighLeverageFilter method) (nirs4all.operators.filters.metadata.MetadataFilter method) (nirs4all.operators.filters.MetadataFilter method) (nirs4all.operators.filters.SampleFilter method) (nirs4all.operators.filters.spectral_quality.SpectralQualityFilter method) (nirs4all.operators.filters.SpectralQualityFilter method) (nirs4all.operators.filters.x_outlier.XOutlierFilter method) (nirs4all.operators.filters.XOutlierFilter method) (nirs4all.operators.filters.y_outlier.YOutlierFilter method) (nirs4all.operators.filters.YOutlierFilter method) (nirs4all.operators.SampleFilter method) (nirs4all.operators.YOutlierFilter method) get_merge_mode() (nirs4all.operators.data.merge.MergeConfig method) (nirs4all.operators.data.MergeConfig method) get_merged_chains() (nirs4all.pipeline.bundle.BundleLoader method) (nirs4all.pipeline.bundle.loader.BundleLoader method) (nirs4all.pipeline.BundleLoader method) get_merged_features() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.SpectroDataset method) get_meta_model_sources() (nirs4all.pipeline.bundle.loader.BundleArtifactProvider method) get_metadata() (nirs4all.pipeline.storage.io.SimulationSaver method) (nirs4all.pipeline.storage.SimulationSaver method) get_model_artifact_id() (nirs4all.pipeline.ExecutionTrace method) (nirs4all.pipeline.trace.execution_trace.ExecutionTrace method) (nirs4all.pipeline.trace.ExecutionTrace method) get_model_for_feature() (nirs4all.controllers.models.stacking.classification.MetaFeatureInfo method) (nirs4all.controllers.models.stacking.MetaFeatureInfo method) get_model_scores() (nirs4all.controllers.data.merge.ModelSelector method) (nirs4all.controllers.shared.model_selector.ModelSelector method) (nirs4all.controllers.shared.ModelSelector method) get_model_step() (nirs4all.pipeline.ExtractedPipeline method) (nirs4all.pipeline.retrainer.ExtractedPipeline method) get_models() (nirs4all.api.result.RunResult method), [1] (nirs4all.api.RunResult method), [1] (nirs4all.data.Predictions method) (nirs4all.data.predictions.Predictions method) (nirs4all.RunResult method), [1] get_models_before_step() (nirs4all.data.Predictions method) (nirs4all.data.predictions.Predictions method) get_n_features() (nirs4all.controllers.models.stacking.classification.ClassificationFeatureExtractor method) (nirs4all.controllers.models.stacking.ClassificationFeatureExtractor method) get_n_features_per_model() (nirs4all.controllers.models.stacking.classification.ClassificationInfo method) (nirs4all.controllers.models.stacking.ClassificationInfo method) get_n_splits() (nirs4all.operators.splitters.BinnedStratifiedGroupKFold method) (nirs4all.operators.splitters.grouped_wrapper.GroupedSplitterWrapper method) (nirs4all.operators.splitters.GroupedSplitterWrapper method) (nirs4all.operators.splitters.KBinsStratifiedSplitter method) (nirs4all.operators.splitters.KennardStoneSplitter method) (nirs4all.operators.splitters.KMeansSplitter method) (nirs4all.operators.splitters.SPlitSplitter method) (nirs4all.operators.splitters.splitters.BinnedStratifiedGroupKFold method) (nirs4all.operators.splitters.splitters.CustomSplitter method) (nirs4all.operators.splitters.splitters.KBinsStratifiedSplitter method) (nirs4all.operators.splitters.splitters.KennardStoneSplitter method) (nirs4all.operators.splitters.splitters.KMeansSplitter method) (nirs4all.operators.splitters.splitters.SPlitSplitter method) (nirs4all.operators.splitters.splitters.SPXYGFold method) (nirs4all.operators.splitters.splitters.SPXYSplitter method) (nirs4all.operators.splitters.splitters.SystematicCircularSplitter method) (nirs4all.operators.splitters.SPXYGFold method) (nirs4all.operators.splitters.SPXYSplitter method) (nirs4all.operators.splitters.SystematicCircularSplitter method) get_next_pipeline_number() (nirs4all.pipeline.storage.manifest_manager.ManifestManager method) (nirs4all.pipeline.storage.ManifestManager method) get_nir_overtones_for_fundamental() (in module nirs4all.data.synthetic.wavenumber) get_nir_zone() (in module nirs4all.data.synthetic) get_nodes_at_step() (nirs4all.pipeline.storage.artifacts.operator_chain.OperatorChain method) (nirs4all.pipeline.storage.artifacts.OperatorChain method) get_noise_model_params() (nirs4all.data.synthetic.InstrumentArchetype method) (nirs4all.data.synthetic.instruments.InstrumentArchetype method) get_num_classes() (nirs4all.controllers.models.factory.ModelFactory static method) get_num_samples() (in module nirs4all.data.types) get_oof_predictions() (nirs4all.data.Predictions method) (nirs4all.data.predictions.Predictions method) get_or_compute() (nirs4all.visualization.prediction_cache.PredictionCache method) get_or_load() (nirs4all.data.performance.cache.DataCache method) (nirs4all.data.performance.DataCache method) get_origin_for_sample() (nirs4all.data.indexer.Indexer method) get_outlier_mask() (nirs4all.operators.models.RobustPLS method) (nirs4all.operators.models.sklearn.robust_pls.RobustPLS method) (nirs4all.operators.models.sklearn.RobustPLS method) get_params() (nirs4all.operators.models.base.BaseModelOperator method) (nirs4all.operators.models.BaseModelOperator method) (nirs4all.operators.models.DiPLS method) (nirs4all.operators.models.FCKPLS method) (nirs4all.operators.models.IKPLS method) (nirs4all.operators.models.IntervalPLS method) (nirs4all.operators.models.KernelPLS method) (nirs4all.operators.models.KOPLS method) (nirs4all.operators.models.LWPLS method) (nirs4all.operators.models.MBPLS method) (nirs4all.operators.models.meta.MetaModel method) (nirs4all.operators.models.MetaModel method) (nirs4all.operators.models.OKLMPLS method) (nirs4all.operators.models.OPLS method) (nirs4all.operators.models.OPLSDA method) (nirs4all.operators.models.PLSDA method) (nirs4all.operators.models.RecursivePLS method) (nirs4all.operators.models.RobustPLS method) (nirs4all.operators.models.SIMPLS method) (nirs4all.operators.models.sklearn.DiPLS method) (nirs4all.operators.models.sklearn.dipls.DiPLS method) (nirs4all.operators.models.sklearn.FCKPLS method) (nirs4all.operators.models.sklearn.fckpls.FCKPLS method) (nirs4all.operators.models.sklearn.IKPLS method) (nirs4all.operators.models.sklearn.ikpls.IKPLS method) (nirs4all.operators.models.sklearn.IntervalPLS method) (nirs4all.operators.models.sklearn.ipls.IntervalPLS method) (nirs4all.operators.models.sklearn.KernelPLS method) (nirs4all.operators.models.sklearn.KOPLS method) (nirs4all.operators.models.sklearn.kopls.KOPLS method) (nirs4all.operators.models.sklearn.LWPLS method) (nirs4all.operators.models.sklearn.lwpls.LWPLS method) (nirs4all.operators.models.sklearn.MBPLS method) (nirs4all.operators.models.sklearn.mbpls.MBPLS method) (nirs4all.operators.models.sklearn.nlpls.KernelPLS method) (nirs4all.operators.models.sklearn.OKLMPLS method) (nirs4all.operators.models.sklearn.oklmpls.OKLMPLS method) (nirs4all.operators.models.sklearn.OPLS method) (nirs4all.operators.models.sklearn.opls.OPLS method) (nirs4all.operators.models.sklearn.OPLSDA method) (nirs4all.operators.models.sklearn.oplsda.OPLSDA method) (nirs4all.operators.models.sklearn.PLSDA method) (nirs4all.operators.models.sklearn.plsda.PLSDA method) (nirs4all.operators.models.sklearn.recursive_pls.RecursivePLS method) (nirs4all.operators.models.sklearn.RecursivePLS method) (nirs4all.operators.models.sklearn.robust_pls.RobustPLS method) (nirs4all.operators.models.sklearn.RobustPLS method) (nirs4all.operators.models.sklearn.SIMPLS method) (nirs4all.operators.models.sklearn.simpls.SIMPLS method) (nirs4all.operators.models.sklearn.SparsePLS method) (nirs4all.operators.models.sklearn.sparsepls.SparsePLS method) (nirs4all.operators.models.SparsePLS method) (nirs4all.operators.transforms.nirs.PyBaselineCorrection method) (nirs4all.operators.transforms.PyBaselineCorrection method) (nirs4all.operators.transforms.RangeDiscretizer method) (nirs4all.operators.transforms.targets.RangeDiscretizer method) (nirs4all.sklearn.NIRSPipeline method) (nirs4all.sklearn.pipeline.NIRSPipeline method) get_partitioner_routing() (nirs4all.pipeline.bundle.BundleLoader method) (nirs4all.pipeline.bundle.loader.BundleLoader method) (nirs4all.pipeline.BundleLoader method) get_partitions() (nirs4all.data.Predictions method) (nirs4all.data.predictions.Predictions method) get_path() (nirs4all.pipeline.PipelineWriter method) (nirs4all.pipeline.storage.io.SimulationSaver method) (nirs4all.pipeline.storage.io_writer.PipelineWriter method) (nirs4all.pipeline.storage.PipelineWriter method) (nirs4all.pipeline.storage.SimulationSaver method) get_pipeline_for_source() (nirs4all.operators.data.merge.SourceBranchConfig method) get_pipeline_path() (nirs4all.pipeline.storage.manifest_manager.ManifestManager method) (nirs4all.pipeline.storage.ManifestManager method) get_pp_name() (nirs4all.operators.data.repetition.RepetitionConfig method) (nirs4all.operators.data.RepetitionConfig method) get_predefined_components() (in module nirs4all.data.synthetic) get_predict_targets() (nirs4all.pipeline.storage.io.SimulationSaver method) (nirs4all.pipeline.storage.SimulationSaver method) get_prediction_by_id() (nirs4all.data.Predictions method) (nirs4all.data.predictions.Predictions method) get_prediction_configs() (nirs4all.operators.data.merge.MergeConfig method) (nirs4all.operators.data.MergeConfig method) get_predictions_by_step() (nirs4all.data.Predictions method) (nirs4all.data.predictions.Predictions method) get_preferred_layout() (nirs4all.controllers.JaxModelController method) (nirs4all.controllers.models.autogluon_model.AutoGluonModelController method) (nirs4all.controllers.models.AutoGluonModelController method) (nirs4all.controllers.models.base_model.BaseModelController method) (nirs4all.controllers.models.BaseModelController method) (nirs4all.controllers.models.jax_model.JaxModelController method) (nirs4all.controllers.models.JaxModelController method) (nirs4all.controllers.models.PyTorchModelController method) (nirs4all.controllers.models.sklearn_model.SklearnModelController method) (nirs4all.controllers.models.SklearnModelController method) (nirs4all.controllers.models.tensorflow_model.TensorFlowModelController method) (nirs4all.controllers.models.TensorFlowModelController method) (nirs4all.controllers.models.torch_model.PyTorchModelController method) (nirs4all.controllers.PyTorchModelController method) (nirs4all.controllers.SklearnModelController method) (nirs4all.controllers.TensorFlowModelController method) get_preprocessing_by_name() (nirs4all.analysis.selector.TransferPreprocessingSelector method) (nirs4all.analysis.TransferPreprocessingSelector method) get_preprocessing_chain() (nirs4all.pipeline.ResolvedPrediction method) (nirs4all.pipeline.resolver.ResolvedPrediction method) get_preset() (in module nirs4all.analysis) (in module nirs4all.analysis.presets) (in module nirs4all.pipeline.config.generator) get_preset_info() (in module nirs4all.pipeline.config.generator) get_primary_artifact() (nirs4all.pipeline.ArtifactProvider method) (nirs4all.pipeline.config.ArtifactProvider method) (nirs4all.pipeline.config.context.ArtifactProvider method) get_processing_ancestry() (nirs4all.data.targets.Targets method) get_quality_breakdown() (nirs4all.operators.filters.spectral_quality.SpectralQualityFilter method) (nirs4all.operators.filters.SpectralQualityFilter method) get_quality_metric_convergence() (nirs4all.visualization.analysis.PreprocPCAEvaluator method) (nirs4all.visualization.analysis.transfer.PreprocPCAEvaluator method) get_record() (nirs4all.pipeline.storage.artifacts.artifact_loader.ArtifactLoader method) (nirs4all.pipeline.storage.artifacts.ArtifactLoader method) get_record_by_chain() (nirs4all.pipeline.storage.artifacts.artifact_loader.ArtifactLoader method) (nirs4all.pipeline.storage.artifacts.ArtifactLoader method) get_records() (nirs4all.core.logging.BufferedHandler method) (nirs4all.core.logging.handlers.BufferedHandler method) get_registered_loaders() (nirs4all.data.loaders.base.LoaderRegistry method) (nirs4all.data.loaders.LoaderRegistry method) get_required_artifact_ids() (nirs4all.pipeline.trace.extractor.TraceBasedExtractor method) (nirs4all.pipeline.trace.TraceBasedExtractor method) (nirs4all.pipeline.TraceBasedExtractor method) get_required_metadata_columns() (nirs4all.pipeline.bundle.BundleLoader method) (nirs4all.pipeline.bundle.loader.BundleLoader method) (nirs4all.pipeline.BundleLoader method) get_response_at() (nirs4all.data.synthetic.detectors.DetectorSpectralResponse method) (nirs4all.data.synthetic.DetectorSpectralResponse method) get_run_id() (in module nirs4all.core.logging) (in module nirs4all.core.logging.context) get_sample_explanation() (nirs4all.api.ExplainResult method), [1] (nirs4all.api.result.ExplainResult method), [1] (nirs4all.ExplainResult method), [1] get_schema_version() (nirs4all.pipeline.storage.manifest_manager.ManifestManager static method) (nirs4all.pipeline.storage.ManifestManager static method) get_scoring_metric() (nirs4all.controllers.models.utilities.ModelControllerUtils static method) get_selected_features() (nirs4all.operators.models.sklearn.SparsePLS method) (nirs4all.operators.models.sklearn.sparsepls.SparsePLS method) (nirs4all.operators.models.SparsePLS method) get_selected_variations() (nirs4all.data.DatasetConfigSchema method) (nirs4all.data.schema.config.DatasetConfigSchema method) (nirs4all.data.schema.DatasetConfigSchema method) get_selection_criterion() (nirs4all.operators.data.merge.MergeConfig method) (nirs4all.operators.data.MergeConfig method) get_selection_strategy() (nirs4all.operators.data.BranchPredictionConfig method) (nirs4all.operators.data.merge.BranchPredictionConfig method) get_selector() (nirs4all.pipeline.config.context.ExecutionContext method) (nirs4all.pipeline.config.ExecutionContext method) get_shape_mismatch_strategy() (nirs4all.operators.data.merge.MergeConfig method) (nirs4all.operators.data.MergeConfig method) get_short_hash() (in module nirs4all.pipeline.storage.artifacts) (in module nirs4all.pipeline.storage.artifacts.utils) get_similar() (nirs4all.data.Predictions method) (nirs4all.data.predictions.Predictions method) get_source_artifact_ids() (nirs4all.controllers.models.stacking.MetaModelArtifact method) (nirs4all.controllers.models.stacking.serialization.MetaModelArtifact method) get_source_by_index() (nirs4all.controllers.models.stacking.MetaModelArtifact method) (nirs4all.controllers.models.stacking.serialization.MetaModelArtifact method) get_source_count() (nirs4all.data.DatasetConfigSchema method) (nirs4all.data.schema.config.DatasetConfigSchema method) (nirs4all.data.schema.DatasetConfigSchema method) get_source_indices() (nirs4all.controllers.data.merge.SourceMergeConfig method) (nirs4all.operators.data.merge.SourceMergeConfig method) (nirs4all.operators.data.SourceMergeConfig method) get_source_name() (nirs4all.operators.data.repetition.RepetitionConfig method) (nirs4all.operators.data.RepetitionConfig method) get_source_names() (nirs4all.data.DatasetConfigSchema method) (nirs4all.data.schema.config.DatasetConfigSchema method) (nirs4all.data.schema.DatasetConfigSchema method) get_stats() (in module nirs4all.core.metrics) (nirs4all.pipeline.storage.artifacts.artifact_registry.ArtifactRegistry method) (nirs4all.pipeline.storage.artifacts.ArtifactRegistry method) (nirs4all.visualization.prediction_cache.PredictionCache method) get_status_symbol() (nirs4all.core.logging.formatters.Symbols method) (nirs4all.core.logging.Symbols method) get_step() (nirs4all.pipeline.ExecutionTrace method) (nirs4all.pipeline.ExtractedPipeline method) (nirs4all.pipeline.MinimalPipeline method) (nirs4all.pipeline.retrainer.ExtractedPipeline method) (nirs4all.pipeline.trace.execution_trace.ExecutionTrace method) (nirs4all.pipeline.trace.ExecutionTrace method) (nirs4all.pipeline.trace.extractor.MinimalPipeline method) (nirs4all.pipeline.trace.MinimalPipeline method) get_step_binaries() (nirs4all.pipeline.storage.artifacts.artifact_loader.ArtifactLoader method) (nirs4all.pipeline.storage.artifacts.ArtifactLoader method) get_step_binaries_by_artifact_ids() (nirs4all.pipeline.storage.artifacts.artifact_loader.ArtifactLoader method) (nirs4all.pipeline.storage.artifacts.ArtifactLoader method) get_step_count() (nirs4all.pipeline.MinimalPipeline method) (nirs4all.pipeline.trace.extractor.MinimalPipeline method) (nirs4all.pipeline.trace.MinimalPipeline method) get_step_dependency_graph() (nirs4all.pipeline.trace.extractor.TraceBasedExtractor method) (nirs4all.pipeline.trace.TraceBasedExtractor method) (nirs4all.pipeline.TraceBasedExtractor method) get_step_indices() (nirs4all.pipeline.MinimalPipeline method) (nirs4all.pipeline.trace.extractor.MinimalPipeline method) (nirs4all.pipeline.trace.MinimalPipeline method) get_step_info() (nirs4all.pipeline.bundle.BundleLoader method) (nirs4all.pipeline.bundle.loader.BundleLoader method) (nirs4all.pipeline.BundleLoader method) get_step_mode() (nirs4all.pipeline.RetrainConfig method) (nirs4all.pipeline.retrainer.RetrainConfig method) get_step_operator_type() (nirs4all.pipeline.bundle.loader.BundleArtifactProvider method) get_steps_before() (nirs4all.pipeline.ExecutionTrace method) (nirs4all.pipeline.trace.execution_trace.ExecutionTrace method) (nirs4all.pipeline.trace.ExecutionTrace method) get_steps_up_to_model() (nirs4all.pipeline.ExecutionTrace method) (nirs4all.pipeline.trace.execution_trace.ExecutionTrace method) (nirs4all.pipeline.trace.ExecutionTrace method) get_strategy() (in module nirs4all.pipeline.config.generator) (nirs4all.controllers.data.merge.SourceMergeConfig method) (nirs4all.operators.data.merge.SourceMergeConfig method) (nirs4all.operators.data.SourceMergeConfig method) get_summary_stats() (nirs4all.data.Predictions method) (nirs4all.data.predictions.Predictions method) get_support() (nirs4all.operators.transforms.CARS method) (nirs4all.operators.transforms.feature_selection.CARS method) (nirs4all.operators.transforms.feature_selection.MCUVE method) (nirs4all.operators.transforms.MCUVE method) get_supported_extensions() (nirs4all.data.loaders.base.LoaderRegistry method) (nirs4all.data.loaders.LoaderRegistry method) get_supported_formats() (in module nirs4all.data.loaders) get_symbols() (in module nirs4all.core.logging) (in module nirs4all.core.logging.formatters) get_targets() (nirs4all.data.targets.Targets method) get_task_type_for_processing() (nirs4all.data.targets.Targets method) get_temperature_effect_regions() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.environmental) get_template_metadata() (nirs4all.pipeline.PipelineLibrary method) (nirs4all.pipeline.storage.library.PipelineLibrary method) (nirs4all.pipeline.storage.PipelineLibrary method) get_test_paths() (nirs4all.data.schema.config.SourceConfig method) (nirs4all.data.schema.config.VariationConfig method) (nirs4all.data.schema.SourceConfig method) (nirs4all.data.schema.VariationConfig method) get_text_color() (nirs4all.visualization.chart_utils.annotator.ChartAnnotator static method) (nirs4all.visualization.chart_utils.ChartAnnotator static method) get_top_models() (nirs4all.visualization.chart_utils.predictions_adapter.PredictionsAdapter method) (nirs4all.visualization.chart_utils.PredictionsAdapter method) get_trace_id() (nirs4all.pipeline.config.context.RuntimeContext method) (nirs4all.pipeline.config.RuntimeContext method) get_train_paths() (nirs4all.data.schema.config.SourceConfig method) (nirs4all.data.schema.config.VariationConfig method) (nirs4all.data.schema.SourceConfig method) (nirs4all.data.schema.VariationConfig method) get_transform_name() (in module nirs4all.analysis) (in module nirs4all.analysis.transfer_utils) get_transform_signature() (in module nirs4all.analysis) (in module nirs4all.analysis.transfer_utils) get_transformers() (nirs4all.sklearn.NIRSPipeline method) (nirs4all.sklearn.pipeline.NIRSPipeline method) get_transforms() (nirs4all.analysis.results.TransferResult method) (nirs4all.analysis.TransferResult method) get_tuning_recommendations() (nirs4all.data.synthetic.fitter.RealDataFitter method) (nirs4all.data.synthetic.RealDataFitter method) get_unequal_strategy() (nirs4all.operators.data.repetition.RepetitionConfig method) (nirs4all.operators.data.RepetitionConfig method) get_unique_values() (nirs4all.data.Predictions method) (nirs4all.data.predictions.Predictions method) get_validation_summary() (in module nirs4all.config.validator) get_variation_count() (nirs4all.data.DatasetConfigSchema method) (nirs4all.data.schema.config.DatasetConfigSchema method) (nirs4all.data.schema.DatasetConfigSchema method) get_variation_names() (nirs4all.data.DatasetConfigSchema method) (nirs4all.data.schema.config.DatasetConfigSchema method) (nirs4all.data.schema.DatasetConfigSchema method) get_version() (in module nirs4all.cli.main) get_water_band_positions() (nirs4all.data.synthetic.environmental.MoistureEffectSimulator method) (nirs4all.data.synthetic.MoistureEffectSimulator method) get_x_values_and_label() (in module nirs4all.utils) (in module nirs4all.utils.header_units) get_xy() (nirs4all.controllers.models.base_model.BaseModelController method) (nirs4all.controllers.models.BaseModelController method) (nirs4all.controllers.models.meta_model.MetaModelController method) (nirs4all.controllers.models.MetaModelController method) get_zone_wavelength_range() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.wavenumber) global_mean (nirs4all.data.synthetic.fitter.SpectralProperties attribute), [1] (nirs4all.data.synthetic.SpectralProperties attribute), [1] global_params (nirs4all.data.DatasetConfigSchema attribute) (nirs4all.data.schema.config.DatasetConfigSchema attribute) (nirs4all.data.schema.DatasetConfigSchema attribute) global_range (nirs4all.data.synthetic.fitter.SpectralProperties attribute), [1] (nirs4all.data.synthetic.SpectralProperties attribute), [1] global_slope_mean (nirs4all.data.synthetic.FittedParameters attribute), [1] (nirs4all.data.synthetic.fitter.FittedParameters attribute), [1] global_slope_std (nirs4all.data.synthetic.FittedParameters attribute), [1] (nirs4all.data.synthetic.fitter.FittedParameters attribute), [1] global_std (nirs4all.data.synthetic.fitter.SpectralProperties attribute), [1] (nirs4all.data.synthetic.SpectralProperties attribute), [1] GRANULAR (nirs4all.data.synthetic.MatrixType attribute) (nirs4all.data.synthetic.prior.MatrixType attribute) grassmann_distance (nirs4all.analysis.transfer_metrics.TransferMetrics attribute) (nirs4all.analysis.TransferMetrics attribute) GRATING (nirs4all.data.synthetic.instruments.MonochromatorType attribute) (nirs4all.data.synthetic.MonochromatorType attribute) GridStrategy (class in nirs4all.pipeline.config.generator) group_aware (nirs4all.data.synthetic.config.PartitionConfig attribute), [1] (nirs4all.data.synthetic.PartitionConfig attribute), [1] group_indices (nirs4all.data.synthetic.metadata.MetadataGenerationResult attribute), [1] (nirs4all.data.synthetic.MetadataGenerationResult attribute), [1] group_names (nirs4all.data.synthetic.builder.BuilderState attribute) (nirs4all.data.synthetic.config.MetadataConfig attribute), [1] (nirs4all.data.synthetic.MetadataConfig attribute), [1] group_values (nirs4all.controllers.data.metadata_partitioner.MetadataPartitionConfig attribute), [1] GroupedSplitterWrapper (class in nirs4all.operators.splitters) (class in nirs4all.operators.splitters.grouped_wrapper) groups (nirs4all.data.synthetic.metadata.MetadataGenerationResult attribute), [1] (nirs4all.data.synthetic.MetadataGenerationResult attribute), [1]

H

h_bond_strength (nirs4all.data.synthetic.procedural.ProceduralComponentConfig attribute), [1] (nirs4all.data.synthetic.ProceduralComponentConfig attribute), [1] h_bond_variability (nirs4all.data.synthetic.procedural.ProceduralComponentConfig attribute), [1] (nirs4all.data.synthetic.ProceduralComponentConfig attribute), [1] Haar (class in nirs4all.operators) (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.nirs) haar_only() (in module nirs4all.operators.transforms) (in module nirs4all.operators.transforms.presets) HANDHELD (nirs4all.data.synthetic.InstrumentCategory attribute) (nirs4all.data.synthetic.instruments.InstrumentCategory attribute) handle_data() (in module nirs4all.data.loaders.loader) handles() (nirs4all.pipeline.config.generator.CartesianStrategy class method) (nirs4all.pipeline.config.generator.ChainStrategy class method) (nirs4all.pipeline.config.generator.ExpansionStrategy class method) (nirs4all.pipeline.config.generator.GridStrategy class method) (nirs4all.pipeline.config.generator.LogRangeStrategy class method) (nirs4all.pipeline.config.generator.OrStrategy class method) (nirs4all.pipeline.config.generator.RangeStrategy class method) (nirs4all.pipeline.config.generator.SampleStrategy class method) (nirs4all.pipeline.config.generator.ZipStrategy class method) has_artifacts() (nirs4all.pipeline.ExecutionStep method) (nirs4all.pipeline.MinimalPipelineStep method) (nirs4all.pipeline.trace.execution_trace.ExecutionStep method) (nirs4all.pipeline.trace.ExecutionStep method) (nirs4all.pipeline.trace.extractor.MinimalPipelineStep method) (nirs4all.pipeline.trace.MinimalPipelineStep method) has_artifacts_for_step() (nirs4all.pipeline.ArtifactProvider method) (nirs4all.pipeline.bundle.loader.BundleArtifactProvider method) (nirs4all.pipeline.config.ArtifactProvider method) (nirs4all.pipeline.config.context.ArtifactProvider method) (nirs4all.pipeline.config.context.LoaderArtifactProvider method) (nirs4all.pipeline.config.context.MapArtifactProvider method) (nirs4all.pipeline.config.LoaderArtifactProvider method) (nirs4all.pipeline.config.MapArtifactProvider method) (nirs4all.pipeline.LoaderArtifactProvider method) (nirs4all.pipeline.MapArtifactProvider method) (nirs4all.pipeline.minimal_predictor.MinimalArtifactProvider method) (nirs4all.pipeline.MinimalArtifactProvider method) (nirs4all.pipeline.RetrainArtifactProvider method) (nirs4all.pipeline.retrainer.RetrainArtifactProvider method) has_binaries_for_step() (nirs4all.pipeline.storage.artifacts.artifact_loader.ArtifactLoader method) (nirs4all.pipeline.storage.artifacts.ArtifactLoader method) has_cartesian_keyword() (in module nirs4all.pipeline.config.generator) has_chain_keyword() (in module nirs4all.pipeline.config.generator) has_errors (nirs4all.data.schema.validation.DiagnosticReport property) (nirs4all.data.schema.validation.error_codes.DiagnosticReport property) has_feature_dim_asymmetry (nirs4all.controllers.data.merge.AsymmetryReport attribute), [1] has_features (nirs4all.controllers.data.merge.BranchAnalysisResult attribute), [1] has_fold_artifacts() (nirs4all.pipeline.ResolvedPrediction method) (nirs4all.pipeline.resolver.ResolvedPrediction method) has_grid_keyword() (in module nirs4all.pipeline.config.generator) has_header (nirs4all.data.detection.DetectionResult attribute), [1] (nirs4all.data.detection.detector.DetectionResult attribute), [1] (nirs4all.data.LoadingParams attribute) (nirs4all.data.schema.config.LoadingParams attribute) (nirs4all.data.schema.LoadingParams attribute) has_log_range_keyword() (in module nirs4all.pipeline.config.generator) has_model_asymmetry (nirs4all.controllers.data.merge.AsymmetryReport attribute), [1] has_model_count_asymmetry (nirs4all.controllers.data.merge.AsymmetryReport attribute), [1] has_model_step() (nirs4all.pipeline.trace.recorder.TraceRecorder method) (nirs4all.pipeline.trace.TraceRecorder method) (nirs4all.pipeline.TraceRecorder method) has_models (nirs4all.controllers.data.merge.BranchAnalysisResult attribute), [1] has_moisture_effects (nirs4all.data.synthetic.EnvironmentalInference attribute), [1] (nirs4all.data.synthetic.fitter.EnvironmentalInference attribute), [1] has_or_keyword() (in module nirs4all.pipeline.config.generator) has_partitioner_routing() (nirs4all.pipeline.bundle.BundleLoader method) (nirs4all.pipeline.bundle.loader.BundleLoader method) (nirs4all.pipeline.BundleLoader method)

has_per_branch_config() (nirs4all.operators.data.merge.MergeConfig method) (nirs4all.operators.data.MergeConfig method) has_predict (nirs4all.data.partition.partition_assigner.PartitionResult property) (nirs4all.data.partition.PartitionResult property) (nirs4all.data.PartitionResult property) has_preset() (in module nirs4all.pipeline.config.generator) has_probabilities (nirs4all.controllers.models.stacking.classification.ClassificationInfo attribute), [1] (nirs4all.controllers.models.stacking.ClassificationInfo attribute), [1] has_range_keyword() (in module nirs4all.pipeline.config.generator) has_sample_keyword() (in module nirs4all.pipeline.config.generator) has_scatter_effects (nirs4all.data.synthetic.fitter.ScatteringInference attribute), [1] (nirs4all.data.synthetic.ScatteringInference attribute), [1] has_step() (nirs4all.pipeline.MinimalPipeline method) (nirs4all.pipeline.trace.extractor.MinimalPipeline method) (nirs4all.pipeline.trace.MinimalPipeline method) has_temperature_effects (nirs4all.data.synthetic.EnvironmentalInference attribute), [1] (nirs4all.data.synthetic.fitter.EnvironmentalInference attribute), [1] has_test (nirs4all.data.partition.partition_assigner.PartitionResult property) (nirs4all.data.partition.PartitionResult property) (nirs4all.data.PartitionResult property) has_trace() (nirs4all.pipeline.ResolvedPrediction method) (nirs4all.pipeline.resolver.ResolvedPrediction method) has_train (nirs4all.data.partition.partition_assigner.PartitionResult property) (nirs4all.data.partition.PartitionResult property) (nirs4all.data.PartitionResult property) has_zip_keyword() (in module nirs4all.pipeline.config.generator) hash (nirs4all.pipeline.storage.artifacts.artifact_persistence.ArtifactMeta attribute) header (nirs4all.data.schema.config.VariationFileConfig attribute) (nirs4all.data.schema.VariationFileConfig attribute) HEADER_PATTERNS (nirs4all.data.detection.AutoDetector attribute) (nirs4all.data.detection.detector.AutoDetector attribute) header_unit (nirs4all.data.detection.DetectionResult attribute), [1] (nirs4all.data.detection.detector.DetectionResult attribute), [1] (nirs4all.data.FeatureSource property) (nirs4all.data.loaders.base.LoaderResult attribute) (nirs4all.data.loaders.LoaderResult attribute) (nirs4all.data.LoadingParams attribute) (nirs4all.data.schema.config.LoadingParams attribute) (nirs4all.data.schema.LoadingParams attribute) header_unit() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.SpectroDataset method) headers (nirs4all.data.FeatureSource property) (nirs4all.data.loaders.base.LoaderResult attribute) (nirs4all.data.loaders.LoaderResult attribute) headers() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.features.Features method) (nirs4all.data.SpectroDataset method) headers_list (nirs4all.data.features.Features property) HeaderUnit (class in nirs4all.data) (class in nirs4all.data.schema) (class in nirs4all.data.schema.config) heatmap_colormap (nirs4all.visualization.charts.ChartConfig attribute), [1] (nirs4all.visualization.charts.config.ChartConfig attribute), [1] HeatmapChart (class in nirs4all.visualization.charts) (class in nirs4all.visualization.charts.heatmap) hidden_factors (nirs4all.data.synthetic.builder.BuilderState attribute) (nirs4all.data.synthetic.config.NonLinearConfig attribute), [1] (nirs4all.data.synthetic.targets.NonLinearTargetConfig attribute), [1] higher_is_better (nirs4all.controllers.models.components.PartitionScores attribute) (nirs4all.controllers.models.components.score_calculator.PartitionScores attribute) HighLeverageFilter (class in nirs4all.operators.filters) (class in nirs4all.operators.filters.high_leverage) history (nirs4all.api.Session property) (nirs4all.api.session.Session property) (nirs4all.Session property) hit_count (nirs4all.data.performance.cache.CacheEntry attribute), [1] (nirs4all.data.performance.CacheEntry attribute), [1] HYDROXYL (nirs4all.data.synthetic.FunctionalGroupType attribute) (nirs4all.data.synthetic.procedural.FunctionalGroupType attribute)

I

IASLS (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.nirs) id (nirs4all.data.PredictionResult property) (nirs4all.data.predictions.PredictionResult property) (nirs4all.visualization.pipeline_diagram.PipelineNode attribute), [1] id_preprocessing() (in module nirs4all.operators.transforms) (in module nirs4all.operators.transforms.presets) identifier_generator (nirs4all.controllers.models.base_model.BaseModelController attribute) (nirs4all.controllers.models.BaseModelController attribute) IdentityAugmenter (class in nirs4all.operators) (class in nirs4all.operators.transforms) IdentityFeaturizer (class in nirs4all.operators.models) (class in nirs4all.operators.models.sklearn) (class in nirs4all.operators.models.sklearn.oklmpls) IdentityTransformer (in module nirs4all.operators) (in module nirs4all.operators.transforms) IKPLS (class in nirs4all.operators.models) (class in nirs4all.operators.models.sklearn) (class in nirs4all.operators.models.sklearn.ikpls) illumination_angle (nirs4all.data.synthetic.measurement_modes.ReflectanceConfig attribute), [1] (nirs4all.data.synthetic.ReflectanceConfig attribute), [1] IModPoly (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.nirs) import_artifacts_to_registry() (nirs4all.pipeline.bundle.BundleLoader method) (nirs4all.pipeline.bundle.loader.BundleLoader method) (nirs4all.pipeline.BundleLoader method) import_class() (nirs4all.controllers.models.factory.ModelFactory static method) import_from_manifest() (nirs4all.pipeline.storage.artifacts.artifact_loader.ArtifactLoader method) (nirs4all.pipeline.storage.artifacts.artifact_registry.ArtifactRegistry method) (nirs4all.pipeline.storage.artifacts.ArtifactLoader method) (nirs4all.pipeline.storage.artifacts.ArtifactRegistry method) import_object() (nirs4all.controllers.models.factory.ModelFactory static method) import_presets() (in module nirs4all.pipeline.config.generator) import_template() (nirs4all.pipeline.PipelineLibrary method) (nirs4all.pipeline.storage.library.PipelineLibrary method) (nirs4all.pipeline.storage.PipelineLibrary method) improvement_pct (nirs4all.analysis.results.TransferResult attribute), [1] (nirs4all.analysis.TransferResult attribute), [1] IMPUTE_FOLD_MEAN (nirs4all.operators.models.CoverageStrategy attribute), [1] (nirs4all.operators.models.meta.CoverageStrategy attribute), [1] IMPUTE_MEAN (nirs4all.operators.models.CoverageStrategy attribute), [1] (nirs4all.operators.models.meta.CoverageStrategy attribute), [1] IMPUTE_ZERO (nirs4all.operators.models.CoverageStrategy attribute), [1] (nirs4all.operators.models.meta.CoverageStrategy attribute), [1] in_branch() (nirs4all.pipeline.trace.recorder.TraceRecorder method) (nirs4all.pipeline.trace.TraceRecorder method) (nirs4all.pipeline.TraceRecorder method) IN_PROGRESS (nirs4all.core.logging.events.Status attribute) (nirs4all.core.logging.Status attribute) incidence_angle (nirs4all.data.synthetic.ATRConfig attribute), [1] (nirs4all.data.synthetic.measurement_modes.ATRConfig attribute), [1] include_augmented (nirs4all.pipeline.config.context.DataSelector attribute), [1] (nirs4all.pipeline.config.DataSelector attribute), [1] include_averaged (nirs4all.operators.models.AllPreviousModelsSelector attribute) (nirs4all.operators.models.selection.AllPreviousModelsSelector attribute) include_combinations (nirs4all.data.synthetic.procedural.ProceduralComponentConfig attribute), [1] (nirs4all.data.synthetic.ProceduralComponentConfig attribute), [1] include_headers (nirs4all.data.synthetic.ExportConfig attribute), [1] (nirs4all.data.synthetic.exporter.ExportConfig attribute), [1] include_index (nirs4all.data.synthetic.ExportConfig attribute), [1] (nirs4all.data.synthetic.exporter.ExportConfig attribute), [1] include_metadata (nirs4all.data.synthetic.builder.BuilderState attribute) (nirs4all.data.synthetic.config.OutputConfig attribute), [1] (nirs4all.data.synthetic.OutputConfig attribute), [1] include_original (nirs4all.operators.data.merge.MergeConfig attribute), [1] (nirs4all.operators.data.MergeConfig attribute), [1] include_overtones (nirs4all.data.synthetic.procedural.ProceduralComponentConfig attribute), [1] (nirs4all.data.synthetic.ProceduralComponentConfig attribute), [1] include_path_length_effect (nirs4all.data.synthetic.ParticleSizeConfig attribute), [1] (nirs4all.data.synthetic.scattering.ParticleSizeConfig attribute), [1] include_skipped (nirs4all.pipeline.trace.extractor.TraceBasedExtractor attribute) (nirs4all.pipeline.trace.TraceBasedExtractor attribute) (nirs4all.pipeline.TraceBasedExtractor attribute) include_wavelength_terms (nirs4all.data.synthetic.EMSCConfig attribute), [1] (nirs4all.data.synthetic.scattering.EMSCConfig attribute), [1] include_wavelengths (nirs4all.data.synthetic.config.OutputConfig attribute), [1] (nirs4all.data.synthetic.OutputConfig attribute), [1] INCOMPATIBLE_PARTITIONS (nirs4all.controllers.models.stacking.crossbranch.CrossBranchCompatibility attribute) (nirs4all.controllers.models.stacking.CrossBranchCompatibility attribute) INCOMPATIBLE_SAMPLES (nirs4all.controllers.models.stacking.crossbranch.CrossBranchCompatibility attribute) (nirs4all.controllers.models.stacking.CrossBranchCompatibility attribute) IncompatibleBranchSamplesError, [1] IncompatibleBranchTypeError, [1] InconsistentLevelError, [1] indent (nirs4all.core.logging.formatters.Symbols property) (nirs4all.core.logging.Symbols property) index (nirs4all.core.logging.BranchContext attribute), [1] (nirs4all.core.logging.context.BranchContext attribute), [1] (nirs4all.core.logging.context.SourceContext attribute), [1] (nirs4all.core.logging.SourceContext attribute), [1] INDEX (nirs4all.data.HeaderUnit attribute) (nirs4all.data.schema.config.HeaderUnit attribute) (nirs4all.data.schema.HeaderUnit attribute) index_column() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.SpectroDataset method) index_normalizer (nirs4all.controllers.models.base_model.BaseModelController attribute) (nirs4all.controllers.models.BaseModelController attribute) Indexer (class in nirs4all.data.indexer) IndexNormalizer (class in nirs4all.controllers.models.components) (class in nirs4all.controllers.models.components.index_normalizer) indices (nirs4all.controllers.models.components.PartitionPrediction attribute) (nirs4all.controllers.models.components.prediction_assembler.PartitionPrediction attribute) (nirs4all.data.selection.column_selector.SelectionResult attribute), [1] (nirs4all.data.selection.row_selector.RowSelectionResult attribute), [1] inferred_domain (nirs4all.data.synthetic.FittedParameters attribute), [1] (nirs4all.data.synthetic.fitter.FittedParameters attribute), [1] inferred_instrument (nirs4all.data.synthetic.FittedParameters attribute), [1] (nirs4all.data.synthetic.fitter.FittedParameters attribute), [1] INFO (nirs4all.data.schema.validation.error_codes.ErrorSeverity attribute) (nirs4all.data.schema.validation.ErrorSeverity attribute) info (nirs4all.data.synthetic.benchmarks.LoadedBenchmarkDataset attribute), [1] (nirs4all.data.synthetic.LoadedBenchmarkDataset attribute), [1] (nirs4all.pipeline.config.generator.ValidationResult attribute), [1] INFO (nirs4all.pipeline.config.generator.ValidationSeverity attribute) INGAAS (nirs4all.data.synthetic.DetectorType attribute) (nirs4all.data.synthetic.instruments.DetectorType attribute) INGAAS_EXTENDED (nirs4all.data.synthetic.DetectorType attribute) (nirs4all.data.synthetic.instruments.DetectorType attribute) INIT (nirs4all.core.logging.events.Phase attribute) (nirs4all.core.logging.Phase attribute) init_global_random_state() (in module nirs4all.pipeline.runner) (in module nirs4all.utils.reproducibility) initialize_context() (nirs4all.pipeline.execution.executor.PipelineExecutor method) (nirs4all.pipeline.execution.PipelineExecutor method) inject_context() (in module nirs4all.core.logging.context) input_chain_path (nirs4all.pipeline.ExecutionStep attribute), [1] (nirs4all.pipeline.trace.execution_trace.ExecutionStep attribute), [1] (nirs4all.pipeline.trace.ExecutionStep attribute), [1] input_features_shape (nirs4all.pipeline.ExecutionStep attribute) (nirs4all.pipeline.trace.execution_trace.ExecutionStep attribute) (nirs4all.pipeline.trace.ExecutionStep attribute) input_layout_shape (nirs4all.visualization.pipeline_diagram.PipelineNode attribute), [1] input_shape (nirs4all.pipeline.ExecutionStep attribute) (nirs4all.pipeline.trace.execution_trace.ExecutionStep attribute) (nirs4all.pipeline.trace.ExecutionStep attribute) instrument (nirs4all.data.synthetic.generator.SyntheticNIRSGenerator attribute) (nirs4all.data.synthetic.SyntheticNIRSGenerator attribute) instrument_given_domain (nirs4all.data.synthetic.NIRSPriorConfig attribute), [1] (nirs4all.data.synthetic.prior.NIRSPriorConfig attribute), [1] instrument_inference (nirs4all.data.synthetic.FittedParameters attribute), [1] (nirs4all.data.synthetic.fitter.FittedParameters attribute), [1] InstrumentArchetype (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.instruments) InstrumentCategory (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.instruments) InstrumentInference (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.fitter) InstrumentSimulator (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.instruments) IntegerKBinsDiscretizer (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.targets) integration_time_ms (nirs4all.data.synthetic.DetectorConfig attribute), [1] (nirs4all.data.synthetic.detectors.DetectorConfig attribute), [1] (nirs4all.data.synthetic.InstrumentArchetype attribute), [1] (nirs4all.data.synthetic.instruments.InstrumentArchetype attribute), [1] intensity_change_per_degree (nirs4all.data.synthetic.environmental.TemperatureEffectParams attribute), [1] (nirs4all.data.synthetic.TemperatureEffectParams attribute), [1] INTERACTANCE (nirs4all.data.synthetic.measurement_modes.MeasurementMode attribute) (nirs4all.data.synthetic.MeasurementMode attribute) interaction_strength (nirs4all.data.synthetic.builder.BuilderState attribute) (nirs4all.data.synthetic.config.NonLinearConfig attribute), [1] (nirs4all.data.synthetic.targets.NonLinearTargetConfig attribute), [1] interactions (nirs4all.data.synthetic.config.NonLinearConfig attribute), [1] INTERNAL_KEYS (nirs4all.data.serialization.ConfigSerializer attribute) (nirs4all.data.serialization.serializer.ConfigSerializer attribute) interpolator_params_ (nirs4all.operators.transforms.Resampler attribute) (nirs4all.operators.transforms.resampler.Resampler attribute) IntervalPLS (class in nirs4all.operators.models) (class in nirs4all.operators.models.sklearn) (class in nirs4all.operators.models.sklearn.ipls) invalid_value() (nirs4all.data.schema.validation.DiagnosticBuilder method) (nirs4all.data.schema.validation.error_codes.DiagnosticBuilder method) invalidate() (nirs4all.data.performance.cache.DataCache method) (nirs4all.data.performance.DataCache method) InvalidMetaModelArtifactError, [1] inverse_kubelka_munk() (nirs4all.data.synthetic.measurement_modes.MeasurementModeSimulator method) (nirs4all.data.synthetic.MeasurementModeSimulator method) inverse_transform() (nirs4all.operators.Baseline method) (nirs4all.operators.MultiplicativeScatterCorrection method) (nirs4all.operators.Normalize method) (nirs4all.operators.SimpleScale method) (nirs4all.operators.transforms.Baseline method) (nirs4all.operators.transforms.FractionToPercent method) (nirs4all.operators.transforms.FromAbsorbance method) (nirs4all.operators.transforms.IntegerKBinsDiscretizer method) (nirs4all.operators.transforms.KubelkaMunk method) (nirs4all.operators.transforms.LogTransform method) (nirs4all.operators.transforms.MultiplicativeScatterCorrection method) (nirs4all.operators.transforms.nirs.LogTransform method) (nirs4all.operators.transforms.nirs.MultiplicativeScatterCorrection method) (nirs4all.operators.transforms.nirs.ReflectanceToAbsorbance method) (nirs4all.operators.transforms.Normalize method) (nirs4all.operators.transforms.PercentToFraction method) (nirs4all.operators.transforms.RangeDiscretizer method) (nirs4all.operators.transforms.ReflectanceToAbsorbance method) (nirs4all.operators.transforms.scalers.Normalize method) (nirs4all.operators.transforms.scalers.SimpleScale method) (nirs4all.operators.transforms.signal.Baseline method) (nirs4all.operators.transforms.signal_conversion.FractionToPercent method) (nirs4all.operators.transforms.signal_conversion.FromAbsorbance method) (nirs4all.operators.transforms.signal_conversion.KubelkaMunk method) (nirs4all.operators.transforms.signal_conversion.PercentToFraction method) (nirs4all.operators.transforms.signal_conversion.SignalTypeConverter method) (nirs4all.operators.transforms.signal_conversion.ToAbsorbance method) (nirs4all.operators.transforms.SignalTypeConverter method) (nirs4all.operators.transforms.SimpleScale method) (nirs4all.operators.transforms.targets.IntegerKBinsDiscretizer method) (nirs4all.operators.transforms.targets.RangeDiscretizer method) (nirs4all.operators.transforms.ToAbsorbance method)

invert_transform() (nirs4all.data.targets.Targets method) is_absorbance_like (nirs4all.data.signal_type.SignalType property) (nirs4all.data.SignalType property) is_archive() (nirs4all.data.loaders.ArchiveHandler static method) (nirs4all.data.loaders.base.ArchiveHandler static method) is_asymmetric (nirs4all.controllers.data.merge.AsymmetryReport attribute), [1] is_auto_mode() (nirs4all.operators.data.merge.SourceBranchConfig method) is_available() (in module nirs4all.utils) (in module nirs4all.utils.backend) is_binary (nirs4all.controllers.models.stacking.classification.ClassificationInfo property) (nirs4all.controllers.models.stacking.ClassificationInfo property) is_branch_specific (nirs4all.pipeline.storage.artifacts.ArtifactRecord property) (nirs4all.pipeline.storage.artifacts.types.ArtifactRecord property) is_classification (nirs4all.controllers.models.stacking.classification.ClassificationInfo property) (nirs4all.controllers.models.stacking.classification.StackingTaskType property) (nirs4all.controllers.models.stacking.ClassificationInfo property) (nirs4all.controllers.models.stacking.StackingTaskType property) (nirs4all.core.task_type.TaskType property) (nirs4all.core.TaskType property) (nirs4all.data.dataset.SpectroDataset property) (nirs4all.data.SpectroDataset property) is_compatible (nirs4all.controllers.models.stacking.crossbranch.CrossBranchValidationResult attribute), [1] (nirs4all.controllers.models.stacking.CrossBranchValidationResult attribute), [1] is_compressed() (nirs4all.data.loaders.ArchiveHandler static method) (nirs4all.data.loaders.base.ArchiveHandler static method) is_configured() (in module nirs4all.core.logging) (in module nirs4all.core.logging.config) is_determinable (nirs4all.data.signal_type.SignalType property) (nirs4all.data.SignalType property) is_disjoint (nirs4all.controllers.data.merge.DisjointBranchAnalysis attribute), [1] is_disjoint_branch() (in module nirs4all.controllers.data.merge) (in module nirs4all.controllers.models.stacking) (in module nirs4all.controllers.models.stacking.branch_validator) is_empty() (nirs4all.pipeline.storage.artifacts.operator_chain.OperatorChain method) (nirs4all.pipeline.storage.artifacts.OperatorChain method) is_enabled() (nirs4all.data.aggregation.AggregationConfig method) (nirs4all.data.aggregation.aggregator.AggregationConfig method) is_files_format() (nirs4all.data.DatasetConfigSchema method) (nirs4all.data.schema.config.DatasetConfigSchema method) (nirs4all.data.schema.DatasetConfigSchema method) is_fitted_ (nirs4all.sklearn.NIRSPipeline attribute) (nirs4all.sklearn.NIRSPipeline property) (nirs4all.sklearn.pipeline.NIRSPipeline attribute) (nirs4all.sklearn.pipeline.NIRSPipeline property) is_fold_specific (nirs4all.pipeline.storage.artifacts.ArtifactRecord property) (nirs4all.pipeline.storage.artifacts.types.ArtifactRecord property) is_fraction (nirs4all.data.signal_type.SignalType property) (nirs4all.data.SignalType property) is_generator_node() (in module nirs4all.pipeline.config.generator) is_gpu_available() (in module nirs4all) (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.accelerated) (in module nirs4all.utils) (in module nirs4all.utils.backend) is_heterogeneous (nirs4all.controllers.data.merge.DisjointMergeMetadata attribute), [1] (nirs4all.operators.data.merge.DisjointMergeMetadata attribute), [1] is_higher_better() (nirs4all.visualization.chart_utils.normalizer.ScoreNormalizer static method) (nirs4all.visualization.chart_utils.predictions_adapter.PredictionsAdapter static method) (nirs4all.visualization.chart_utils.PredictionsAdapter static method) (nirs4all.visualization.chart_utils.ScoreNormalizer static method) is_identical() (nirs4all.data.serialization.serializer.ConfigDiff method) is_ikpls_available() (in module nirs4all.utils.backend) is_jax_available() (in module nirs4all.utils) (in module nirs4all.utils.backend) is_keras_available() (in module nirs4all.utils) (in module nirs4all.utils.backend) is_legacy_format() (nirs4all.data.DatasetConfigSchema method) (nirs4all.data.schema.config.DatasetConfigSchema method) (nirs4all.data.schema.DatasetConfigSchema method) is_loaded (nirs4all.data.performance.lazy_loader.LazyArray property) (nirs4all.data.performance.LazyArray property) is_meta_estimator() (nirs4all.controllers.models.factory.ModelFactory static method) is_meta_model (nirs4all.controllers.models.stacking.ModelLevelInfo attribute), [1] (nirs4all.controllers.models.stacking.multilevel.ModelLevelInfo attribute), [1] (nirs4all.pipeline.storage.artifacts.ArtifactRecord property) (nirs4all.pipeline.storage.artifacts.types.ArtifactRecord property) is_metadata_loaded (nirs4all.data.performance.lazy_loader.LazyDataset property) (nirs4all.data.performance.LazyDataset property) is_multi_source() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.DatasetConfigSchema method) (nirs4all.data.schema.config.DatasetConfigSchema method) (nirs4all.data.schema.DatasetConfigSchema method) (nirs4all.data.SpectroDataset method) is_multiclass (nirs4all.controllers.models.stacking.classification.ClassificationInfo property) (nirs4all.controllers.models.stacking.ClassificationInfo property) is_multioutput (nirs4all.api.PredictResult property) (nirs4all.api.result.PredictResult property) (nirs4all.PredictResult property) is_nested (nirs4all.controllers.models.stacking.branch_validator.BranchInfo attribute) (nirs4all.controllers.models.stacking.BranchInfo attribute) is_percent (nirs4all.data.signal_type.SignalType property) (nirs4all.data.SignalType property) is_percent_ (nirs4all.operators.transforms.signal_conversion.ToAbsorbance attribute) (nirs4all.operators.transforms.ToAbsorbance attribute) is_predict() (nirs4all.pipeline.retrainer.StepMode method) (nirs4all.pipeline.StepMode method) is_preset_reference() (in module nirs4all.pipeline.config.generator) is_pure_cartesian_node() (in module nirs4all.pipeline.config.generator) is_pure_chain_node() (in module nirs4all.pipeline.config.generator) is_pure_grid_node() (in module nirs4all.pipeline.config.generator) is_pure_log_range_node() (in module nirs4all.pipeline.config.generator) is_pure_or_node() (in module nirs4all.pipeline.config.generator) is_pure_range_node() (in module nirs4all.pipeline.config.generator) is_pure_sample_node() (in module nirs4all.pipeline.config.generator) is_pure_zip_node() (in module nirs4all.pipeline.config.generator) is_reflectance_based (nirs4all.data.signal_type.SignalType property) (nirs4all.data.SignalType property) is_regression (nirs4all.core.task_type.TaskType property) (nirs4all.core.TaskType property) (nirs4all.data.dataset.SpectroDataset property) (nirs4all.data.SpectroDataset property) is_serializable() (in module nirs4all.pipeline.storage.artifacts.artifact_persistence) is_source_specific (nirs4all.pipeline.storage.artifacts.ArtifactRecord property) (nirs4all.pipeline.storage.artifacts.types.ArtifactRecord property) is_sources_format() (nirs4all.data.DatasetConfigSchema method) (nirs4all.data.schema.config.DatasetConfigSchema method) (nirs4all.data.schema.DatasetConfigSchema method) is_stacking_compatible() (in module nirs4all.controllers.models.stacking) (in module nirs4all.controllers.models.stacking.branch_validator) is_stale() (nirs4all.data.performance.cache.CacheEntry method) (nirs4all.data.performance.CacheEntry method) is_tensorflow_available() (in module nirs4all) (in module nirs4all.utils) (in module nirs4all.utils.backend) is_torch_available() (in module nirs4all.utils) (in module nirs4all.utils.backend) is_train() (nirs4all.pipeline.retrainer.StepMode method) (nirs4all.pipeline.StepMode method) is_trained (nirs4all.api.Session attribute) (nirs4all.api.Session property) (nirs4all.api.session.Session attribute) (nirs4all.api.session.Session property) (nirs4all.Session attribute) (nirs4all.Session property) is_transmittance_based (nirs4all.data.signal_type.SignalType property) (nirs4all.data.SignalType property) is_v3_artifact_id() (in module nirs4all.pipeline.storage.artifacts) (in module nirs4all.pipeline.storage.artifacts.operator_chain) is_valid (nirs4all.controllers.models.stacking.branch_validator.BranchValidationResult attribute) (nirs4all.controllers.models.stacking.BranchValidationResult attribute) (nirs4all.controllers.models.stacking.LevelValidationResult attribute), [1] (nirs4all.controllers.models.stacking.multilevel.LevelValidationResult attribute), [1] (nirs4all.controllers.models.stacking.reconstructor.ValidationResult attribute) (nirs4all.controllers.models.stacking.reconstructor.ValidationResult property) (nirs4all.controllers.models.stacking.ValidationResult attribute) (nirs4all.controllers.models.stacking.ValidationResult property) (nirs4all.controllers.models.ValidationResult attribute) (nirs4all.controllers.models.ValidationResult property) (nirs4all.data.schema.validation.DiagnosticReport property) (nirs4all.data.schema.validation.error_codes.DiagnosticReport property) (nirs4all.data.schema.validation.ValidationResult attribute), [1] (nirs4all.data.schema.validation.validators.ValidationResult attribute), [1] (nirs4all.data.schema.ValidationResult attribute), [1] (nirs4all.data.ValidationResult attribute), [1] (nirs4all.pipeline.config.generator.ValidationResult attribute), [1] is_variations_format() (nirs4all.data.DatasetConfigSchema method) (nirs4all.data.schema.config.DatasetConfigSchema method) (nirs4all.data.schema.DatasetConfigSchema method) is_x_loaded (nirs4all.data.performance.lazy_loader.LazyDataset property) (nirs4all.data.performance.LazyDataset property) is_y_grouping (nirs4all.operators.data.repetition.RepetitionConfig property) (nirs4all.operators.data.RepetitionConfig property) is_y_loaded (nirs4all.data.performance.lazy_loader.LazyDataset property) (nirs4all.data.performance.LazyDataset property) iter_datasets() (nirs4all.data.config.DatasetConfigs method) (nirs4all.data.DatasetConfigs method) iter_with_progress() (in module nirs4all.pipeline.config.generator)

J

JAX (nirs4all.data.synthetic.accelerated.AcceleratorBackend attribute) (nirs4all.data.synthetic.AcceleratorBackend attribute) JaxModelController (class in nirs4all.controllers) (class in nirs4all.controllers.models) (class in nirs4all.controllers.models.jax_model)

JaxModelWrapper (class in nirs4all.controllers.models.jax_wrapper) JSON (nirs4all.data.serialization.serializer.SerializationFormat attribute) JsonFormatter (class in nirs4all.core.logging) (class in nirs4all.core.logging.formatters)

K

k (nirs4all.operators.models.selection.TopKByMetricSelector attribute) (nirs4all.operators.models.TopKByMetricSelector attribute) KBinsStratifiedSplitter (class in nirs4all.operators.splitters) (class in nirs4all.operators.splitters.splitters) keep_datasets (nirs4all.pipeline.execution.orchestrator.PipelineOrchestrator attribute) (nirs4all.pipeline.execution.PipelineOrchestrator attribute) (nirs4all.pipeline.PipelineRunner attribute) (nirs4all.pipeline.runner.PipelineRunner attribute) (nirs4all.PipelineRunner attribute) keep_sources() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.features.Features method) (nirs4all.data.SpectroDataset method) KennardStoneSplitter (class in nirs4all.operators.splitters) (class in nirs4all.operators.splitters.splitters) KernelPLS (class in nirs4all.operators.models) (class in nirs4all.operators.models.sklearn) (class in nirs4all.operators.models.sklearn.nlpls) kernels_ (nirs4all.operators.models.FractionalConvFeaturizer attribute) (nirs4all.operators.models.sklearn.fckpls.FractionalConvFeaturizer attribute) (nirs4all.operators.models.sklearn.FractionalConvFeaturizer attribute) key (nirs4all.data.performance.cache.CacheEntry attribute), [1] (nirs4all.data.performance.CacheEntry attribute), [1] key_column (nirs4all.data.selection.sample_linker.LinkingResult attribute), [1] keyword (nirs4all.pipeline.config.context.StepMetadata attribute), [1] (nirs4all.pipeline.config.StepMetadata attribute), [1] (nirs4all.pipeline.steps.ParsedStep attribute), [1] (nirs4all.pipeline.steps.parser.ParsedStep attribute), [1] keywords (nirs4all.pipeline.config.generator.CartesianStrategy attribute), [1] (nirs4all.pipeline.config.generator.ChainStrategy attribute), [1] (nirs4all.pipeline.config.generator.ExpansionStrategy attribute), [1] (nirs4all.pipeline.config.generator.GridStrategy attribute), [1] (nirs4all.pipeline.config.generator.LogRangeStrategy attribute), [1] (nirs4all.pipeline.config.generator.OrStrategy attribute), [1] (nirs4all.pipeline.config.generator.RangeStrategy attribute), [1] (nirs4all.pipeline.config.generator.SampleStrategy attribute), [1] (nirs4all.pipeline.config.generator.ZipStrategy attribute), [1]

KMeansSplitter (class in nirs4all.operators.splitters) (class in nirs4all.operators.splitters.splitters) KOPLS (class in nirs4all.operators.models) (class in nirs4all.operators.models.sklearn) (class in nirs4all.operators.models.sklearn.kopls) KPLS (in module nirs4all.operators.models) (in module nirs4all.operators.models.sklearn) (in module nirs4all.operators.models.sklearn.nlpls) KUBELKA_MUNK (nirs4all.data.schema.config.SignalTypeEnum attribute) (nirs4all.data.schema.SignalTypeEnum attribute) (nirs4all.data.signal_type.SignalType attribute) (nirs4all.data.SignalType attribute) (nirs4all.data.synthetic.scattering.ScatteringModel attribute) (nirs4all.data.synthetic.ScatteringModel attribute) kubelka_munk() (nirs4all.data.synthetic.measurement_modes.MeasurementModeSimulator method) (nirs4all.data.synthetic.MeasurementModeSimulator method) kubelka_munk_linearity (nirs4all.data.synthetic.fitter.SpectralProperties attribute), [1] (nirs4all.data.synthetic.SpectralProperties attribute), [1] KubelkaMunk (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.signal_conversion) kurtosis (nirs4all.data.synthetic.fitter.SpectralProperties attribute), [1] (nirs4all.data.synthetic.SpectralProperties attribute), [1] kwargs (nirs4all.pipeline.retrainer.StepMode attribute), [1] (nirs4all.pipeline.StepMode attribute), [1]

L

label (nirs4all.visualization.pipeline_diagram.PipelineNode attribute), [1] label_fontsize (nirs4all.visualization.charts.ChartConfig attribute), [1] (nirs4all.visualization.charts.config.ChartConfig attribute), [1] LAST (nirs4all.data.aggregation.AggregationMethod attribute) (nirs4all.data.aggregation.aggregator.AggregationMethod attribute) last_aggregate (nirs4all.pipeline.PipelineRunner property) (nirs4all.pipeline.runner.PipelineRunner property) (nirs4all.PipelineRunner property) last_aggregate_exclude_outliers (nirs4all.pipeline.PipelineRunner property) (nirs4all.pipeline.runner.PipelineRunner property) (nirs4all.PipelineRunner property) last_aggregate_method (nirs4all.pipeline.PipelineRunner property) (nirs4all.pipeline.runner.PipelineRunner property) (nirs4all.PipelineRunner property) launch_training() (nirs4all.controllers.models.base_model.BaseModelController method) (nirs4all.controllers.models.BaseModelController method) layout (nirs4all.pipeline.config.context.DataSelector attribute), [1] (nirs4all.pipeline.config.DataSelector attribute), [1] lazy_import() (in module nirs4all.utils) (in module nirs4all.utils.backend) LazyArray (class in nirs4all.data.performance) (class in nirs4all.data.performance.lazy_loader) LazyDataset (class in nirs4all.data.performance) (class in nirs4all.data.performance.lazy_loader) LEAKAGE_CHECK (nirs4all.core.logging.events.EventType attribute) (nirs4all.core.logging.EventType attribute) learning_rate (nirs4all.pipeline.RetrainConfig attribute), [1] (nirs4all.pipeline.retrainer.RetrainConfig attribute), [1] LegacyParser (class in nirs4all.data.parsers) (class in nirs4all.data.parsers.legacy_parser) legend_fontsize (nirs4all.visualization.charts.ChartConfig attribute), [1] (nirs4all.visualization.charts.config.ChartConfig attribute), [1] level (nirs4all.controllers.models.stacking.ModelLevelInfo attribute), [1] (nirs4all.controllers.models.stacking.multilevel.ModelLevelInfo attribute), [1] (nirs4all.core.logging.events.LogEvent attribute), [1] (nirs4all.core.logging.LogEvent attribute), [1] (nirs4all.operators.models.meta.MetaModel property) (nirs4all.operators.models.meta.StackingConfig attribute), [1] (nirs4all.operators.models.MetaModel property) (nirs4all.operators.models.StackingConfig attribute), [1] LEVEL_1 (nirs4all.operators.models.meta.StackingLevel attribute), [1] (nirs4all.operators.models.StackingLevel attribute), [1] LEVEL_2 (nirs4all.operators.models.meta.StackingLevel attribute), [1] (nirs4all.operators.models.StackingLevel attribute), [1] LEVEL_3 (nirs4all.operators.models.meta.StackingLevel attribute), [1] (nirs4all.operators.models.StackingLevel attribute), [1] LEVEL_COLORS (nirs4all.core.logging.ConsoleFormatter attribute) (nirs4all.core.logging.formatters.ConsoleFormatter attribute) LevelValidationResult (class in nirs4all.controllers.models.stacking) (class in nirs4all.controllers.models.stacking.multilevel) library (nirs4all.data.synthetic.generator.SyntheticNIRSGenerator attribute) (nirs4all.data.synthetic.SyntheticNIRSGenerator attribute) (nirs4all.pipeline.PipelineRunner property) (nirs4all.pipeline.runner.PipelineRunner property) (nirs4all.PipelineRunner property) LibraryManager (class in nirs4all.workspace) (class in nirs4all.workspace.library_manager) license (nirs4all.data.synthetic.BenchmarkDatasetInfo attribute), [1] (nirs4all.data.synthetic.benchmarks.BenchmarkDatasetInfo attribute), [1] LinearBaselineDrift (class in nirs4all.operators.transforms) link() (nirs4all.data.SampleLinker method) (nirs4all.data.selection.sample_linker.SampleLinker method) (nirs4all.data.selection.SampleLinker method) link_aligned() (nirs4all.data.SampleLinker method) (nirs4all.data.selection.sample_linker.SampleLinker method) (nirs4all.data.selection.SampleLinker method) link_by (nirs4all.data.FileConfig attribute) (nirs4all.data.schema.config.FileConfig attribute) (nirs4all.data.schema.config.SharedMetadataConfig attribute) (nirs4all.data.schema.config.SharedTargetsConfig attribute) (nirs4all.data.schema.config.SourceConfig attribute) (nirs4all.data.schema.FileConfig attribute) (nirs4all.data.schema.SharedMetadataConfig attribute) (nirs4all.data.schema.SharedTargetsConfig attribute) (nirs4all.data.schema.SourceConfig attribute) link_xy() (in module nirs4all.data.selection.sample_linker) link_xym() (in module nirs4all.data.selection.sample_linker) linked_data (nirs4all.data.selection.sample_linker.LinkingResult attribute), [1] LinkingError, [1], [2] LinkingResult (class in nirs4all.data.selection.sample_linker) linspace (nirs4all.data.synthetic.accelerated.AcceleratedArrays attribute) (nirs4all.data.synthetic.AcceleratedArrays attribute) lipid_band_intensity (nirs4all.data.synthetic.fitter.SpectralProperties attribute), [1] (nirs4all.data.synthetic.SpectralProperties attribute), [1] LIQUID (nirs4all.data.synthetic.MatrixType attribute) (nirs4all.data.synthetic.prior.MatrixType attribute) list_all_pipelines() (nirs4all.pipeline.storage.manifest_manager.ManifestManager method) (nirs4all.pipeline.storage.ManifestManager method) list_archive_members() (in module nirs4all.data.loaders) (in module nirs4all.data.loaders.archive_loader) list_benchmark_datasets() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.benchmarks) list_detector_types() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.detectors) list_domains() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.domains) list_execution_traces() (nirs4all.pipeline.storage.manifest_manager.ManifestManager method) (nirs4all.pipeline.storage.ManifestManager method) list_files() (nirs4all.pipeline.PipelineWriter method) (nirs4all.pipeline.storage.io.SimulationSaver method) (nirs4all.pipeline.storage.io_writer.PipelineWriter method) (nirs4all.pipeline.storage.PipelineWriter method) (nirs4all.pipeline.storage.SimulationSaver method) list_filtered() (nirs4all.workspace.library_manager.LibraryManager method) (nirs4all.workspace.LibraryManager method) list_fullruns() (nirs4all.workspace.library_manager.LibraryManager method) (nirs4all.workspace.LibraryManager method) list_instrument_archetypes() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.instruments) list_methods() (nirs4all.operators.transforms.nirs.PyBaselineCorrection static method) (nirs4all.operators.transforms.PyBaselineCorrection static method) list_of_2D_sets() (in module nirs4all.operators.transforms) (in module nirs4all.operators.transforms.presets) list_pipelines() (nirs4all.pipeline.storage.manifest_manager.ManifestManager method) (nirs4all.pipeline.storage.ManifestManager method) (nirs4all.workspace.library_manager.LibraryManager method) (nirs4all.workspace.LibraryManager method) list_presets() (in module nirs4all.analysis) (in module nirs4all.analysis.presets) (in module nirs4all.pipeline.config.generator) list_runs() (nirs4all.data.Predictions method) (nirs4all.data.predictions.Predictions method) list_tar_members() (nirs4all.data.loaders.ArchiveHandler static method) (nirs4all.data.loaders.base.ArchiveHandler static method) list_templates() (nirs4all.pipeline.PipelineLibrary method) (nirs4all.pipeline.storage.library.PipelineLibrary method) (nirs4all.pipeline.storage.PipelineLibrary method) (nirs4all.workspace.library_manager.LibraryManager method) (nirs4all.workspace.LibraryManager method) list_zip_members() (nirs4all.data.loaders.ArchiveHandler static method) (nirs4all.data.loaders.base.ArchiveHandler static method) LOAD (nirs4all.core.logging.events.EventType attribute) (nirs4all.core.logging.EventType attribute) load() (in module nirs4all.pipeline.storage.artifacts.artifact_persistence) (nirs4all.data.loaders.archive_loader.EnhancedZipLoader method) (nirs4all.data.loaders.archive_loader.TarLoader method) (nirs4all.data.loaders.base.FileLoader method) (nirs4all.data.loaders.base.LoaderRegistry method) (nirs4all.data.loaders.csv_loader_new.CSVLoader method) (nirs4all.data.loaders.CSVLoader method) (nirs4all.data.loaders.EnhancedZipLoader method) (nirs4all.data.loaders.excel_loader.ExcelLoader method) (nirs4all.data.loaders.ExcelLoader method) (nirs4all.data.loaders.FileLoader method) (nirs4all.data.loaders.LoaderRegistry method) (nirs4all.data.loaders.matlab_loader.MatlabLoader method) (nirs4all.data.loaders.MatlabLoader method) (nirs4all.data.loaders.numpy_loader.NumpyLoader method) (nirs4all.data.loaders.NumpyLoader method) (nirs4all.data.loaders.parquet_loader.ParquetLoader method) (nirs4all.data.loaders.ParquetLoader method) (nirs4all.data.loaders.TarLoader method) (nirs4all.data.performance.lazy_loader.LazyArray method) (nirs4all.data.performance.LazyArray method) (nirs4all.data.Predictions class method) (nirs4all.data.predictions.Predictions class method) (nirs4all.data.serialization.ConfigSerializer method) (nirs4all.data.serialization.serializer.ConfigSerializer method) (nirs4all.data.synthetic.FittedParameters class method) (nirs4all.data.synthetic.fitter.FittedParameters class method)

load_all() (nirs4all.data.performance.lazy_loader.LazyDataset method) (nirs4all.data.performance.LazyDataset method) load_artifact() (nirs4all.pipeline.storage.artifacts.artifact_registry.ArtifactRegistry method) (nirs4all.pipeline.storage.artifacts.ArtifactRegistry method) load_benchmark_dataset() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.benchmarks) load_bundle() (in module nirs4all.pipeline.bundle.loader) load_by_artifact_id() (nirs4all.pipeline.storage.artifacts.artifact_loader.ArtifactLoader method) (nirs4all.pipeline.storage.artifacts.ArtifactLoader method) load_by_chain() (nirs4all.pipeline.storage.artifacts.artifact_loader.ArtifactLoader method) (nirs4all.pipeline.storage.artifacts.ArtifactLoader method) load_by_chain_prefix() (nirs4all.pipeline.storage.artifacts.artifact_loader.ArtifactLoader method) (nirs4all.pipeline.storage.artifacts.ArtifactLoader method) load_by_id() (nirs4all.pipeline.storage.artifacts.artifact_loader.ArtifactLoader method) (nirs4all.pipeline.storage.artifacts.ArtifactLoader method) load_csv() (in module nirs4all.data.loaders) (in module nirs4all.data.loaders.csv_loader) (in module nirs4all.data.loaders.csv_loader_new) load_csv_new() (in module nirs4all.data.loaders) load_excel() (in module nirs4all.data.loaders) (in module nirs4all.data.loaders.excel_loader) load_execution_trace() (nirs4all.pipeline.storage.manifest_manager.ManifestManager method) (nirs4all.pipeline.storage.ManifestManager method) load_file() (in module nirs4all.data.loaders) load_fold_models() (nirs4all.pipeline.storage.artifacts.artifact_loader.ArtifactLoader method) (nirs4all.pipeline.storage.artifacts.ArtifactLoader method) load_for_step() (nirs4all.pipeline.storage.artifacts.artifact_loader.ArtifactLoader method) (nirs4all.pipeline.storage.artifacts.ArtifactLoader method) load_from_file() (nirs4all.data.Predictions method) (nirs4all.data.predictions.Predictions method) load_from_file_cls() (nirs4all.data.Predictions class method) (nirs4all.data.predictions.Predictions class method) load_from_parquet() (nirs4all.data.Predictions class method) (nirs4all.data.predictions.Predictions class method) load_manifest() (nirs4all.pipeline.storage.manifest_manager.ManifestManager method) (nirs4all.pipeline.storage.ManifestManager method) load_matlab() (in module nirs4all.data.loaders) (in module nirs4all.data.loaders.matlab_loader) load_meta_model_for_prediction() (nirs4all.pipeline.storage.artifacts.artifact_loader.ArtifactLoader method) (nirs4all.pipeline.storage.artifacts.ArtifactLoader method) load_meta_model_with_sources() (nirs4all.pipeline.storage.artifacts.artifact_loader.ArtifactLoader method) (nirs4all.pipeline.storage.artifacts.ArtifactLoader method) load_model() (nirs4all.controllers.models.autogluon_model.AutoGluonModelController method) (nirs4all.controllers.models.AutoGluonModelController method) (nirs4all.controllers.models.base_model.BaseModelController method) (nirs4all.controllers.models.BaseModelController method) load_numpy() (in module nirs4all.data.loaders) (in module nirs4all.data.loaders.numpy_loader) load_parquet() (in module nirs4all.data.loaders) (in module nirs4all.data.loaders.parquet_loader) load_results() (nirs4all.visualization.analysis.shap.ShapAnalyzer static method) (nirs4all.visualization.analysis.ShapAnalyzer static method) load_session() (in module nirs4all) (in module nirs4all.api) (in module nirs4all.api.session) load_template() (nirs4all.pipeline.PipelineLibrary method) (nirs4all.pipeline.storage.library.PipelineLibrary method) (nirs4all.pipeline.storage.PipelineLibrary method) (nirs4all.workspace.library_manager.LibraryManager method) (nirs4all.workspace.LibraryManager method) load_with_dependencies() (nirs4all.pipeline.storage.artifacts.artifact_loader.ArtifactLoader method) (nirs4all.pipeline.storage.artifacts.ArtifactLoader method) load_XY() (in module nirs4all.data.loaders.loader) LoadedBenchmarkDataset (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.benchmarks) loader (nirs4all.pipeline.config.context.LoaderArtifactProvider attribute) (nirs4all.pipeline.config.LoaderArtifactProvider attribute) (nirs4all.pipeline.LoaderArtifactProvider attribute) LoaderArtifactProvider (class in nirs4all.pipeline) (class in nirs4all.pipeline.config) (class in nirs4all.pipeline.config.context) LoaderError, [1] LoaderRegistry (class in nirs4all.data.loaders) (class in nirs4all.data.loaders.base) LoaderResult (class in nirs4all.data.loaders) (class in nirs4all.data.loaders.base) LOADING (nirs4all.data.schema.validation.error_codes.ErrorCategory attribute) (nirs4all.data.schema.validation.ErrorCategory attribute) LoadingParams (class in nirs4all.data) (class in nirs4all.data.schema) (class in nirs4all.data.schema.config) LocalClipping (class in nirs4all.operators.transforms) LocalMixupAugmenter (class in nirs4all.operators.transforms) LocalStandardNormalVariate (class in nirs4all.operators) (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.scalers) LocalWavelengthWarp (class in nirs4all.operators.transforms) location (nirs4all.data.schema.validation.DiagnosticMessage attribute), [1] (nirs4all.data.schema.validation.error_codes.DiagnosticMessage attribute), [1] log (nirs4all.data.synthetic.accelerated.AcceleratedArrays attribute) (nirs4all.data.synthetic.AcceleratedArrays attribute) LOG_1_R (nirs4all.data.schema.config.SignalTypeEnum attribute) (nirs4all.data.schema.SignalTypeEnum attribute) (nirs4all.data.signal_type.SignalType attribute) (nirs4all.data.SignalType attribute) LOG_1_T (nirs4all.data.signal_type.SignalType attribute) (nirs4all.data.SignalType attribute) log_summary() (nirs4all.controllers.data.merge.DisjointMergeMetadata method) (nirs4all.operators.data.merge.DisjointMergeMetadata method) log_transform() (in module nirs4all.operators.transforms) (in module nirs4all.operators.transforms.nirs) log_warnings (nirs4all.controllers.models.ReconstructorConfig attribute), [1] (nirs4all.controllers.models.stacking.config.ReconstructorConfig attribute), [1] (nirs4all.controllers.models.stacking.crossbranch.CrossBranchValidator attribute) (nirs4all.controllers.models.stacking.CrossBranchValidator attribute) (nirs4all.controllers.models.stacking.multilevel.MultiLevelValidator attribute) (nirs4all.controllers.models.stacking.MultiLevelValidator attribute) (nirs4all.controllers.models.stacking.ReconstructorConfig attribute), [1] log_warnings() (nirs4all.controllers.data.merge.DisjointMergeMetadata method) (nirs4all.operators.data.merge.DisjointMergeMetadata method) LogConfig (class in nirs4all.core.logging.config) LogContext (class in nirs4all.core.logging) (class in nirs4all.core.logging.context) LogEvent (class in nirs4all.core.logging) (class in nirs4all.core.logging.events) LogRangeStrategy (class in nirs4all.pipeline.config.generator) LogTransform (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.nirs) LOWER_IS_BETTER_METRICS (nirs4all.controllers.data.merge.ModelSelector attribute), [1] (nirs4all.controllers.data.merge.PredictionAggregator attribute) (nirs4all.controllers.shared.model_selector.ModelSelector attribute), [1] (nirs4all.controllers.shared.ModelSelector attribute), [1] (nirs4all.controllers.shared.prediction_aggregator.PredictionAggregator attribute) (nirs4all.controllers.shared.PredictionAggregator attribute) lower_percentile (nirs4all.operators.filters.y_outlier.YOutlierFilter attribute) (nirs4all.operators.filters.YOutlierFilter attribute) (nirs4all.operators.YOutlierFilter attribute) LRUCache (class in nirs4all.pipeline.storage.artifacts.artifact_loader) LVF (nirs4all.data.synthetic.instruments.MonochromatorType attribute) (nirs4all.data.synthetic.MonochromatorType attribute) LWPLS (class in nirs4all.operators.models) (class in nirs4all.operators.models.sklearn) (class in nirs4all.operators.models.sklearn.lwpls)

M

MAE (nirs4all.operators.data.DisjointSelectionCriterion attribute), [1] (nirs4all.operators.data.merge.DisjointSelectionCriterion attribute), [1] main() (in module nirs4all.cli) (in module nirs4all.cli.main) make_cache_key() (in module nirs4all.data.performance.cache) make_key() (nirs4all.visualization.prediction_cache.PredictionCache static method) makeRecord() (nirs4all.core.logging.config.Nirs4allLogger method) (nirs4all.core.logging.Nirs4allLogger method) manifest (nirs4all.pipeline.ResolvedPrediction attribute), [1] (nirs4all.pipeline.resolver.ResolvedPrediction attribute), [1] manifest_manager (nirs4all.pipeline.config.context.RuntimeContext attribute), [1] (nirs4all.pipeline.config.RuntimeContext attribute), [1] (nirs4all.pipeline.execution.executor.PipelineExecutor attribute) (nirs4all.pipeline.execution.PipelineExecutor attribute) (nirs4all.pipeline.Explainer attribute) (nirs4all.pipeline.explainer.Explainer attribute) (nirs4all.pipeline.minimal_predictor.MinimalPredictor attribute) (nirs4all.pipeline.MinimalPredictor attribute) (nirs4all.pipeline.Predictor attribute) (nirs4all.pipeline.predictor.Predictor attribute) ManifestManager (class in nirs4all.pipeline.storage) (class in nirs4all.pipeline.storage.manifest_manager) MapArtifactProvider (class in nirs4all.pipeline) (class in nirs4all.pipeline.config) (class in nirs4all.pipeline.config.context) mark_excluded() (nirs4all.data.indexer.Indexer method) mark_included() (nirs4all.data.indexer.Indexer method) mark_step_skipped() (nirs4all.pipeline.trace.recorder.TraceRecorder method) (nirs4all.pipeline.trace.TraceRecorder method) (nirs4all.pipeline.TraceRecorder method) mask (nirs4all.data.selection.row_selector.RowSelectionResult attribute), [1] matched_keys (nirs4all.data.selection.sample_linker.LinkingResult attribute), [1] matches() (nirs4all.controllers.AugmentationChartController class method) (nirs4all.controllers.AutoTransferPreprocessingController class method) (nirs4all.controllers.BranchController class method) (nirs4all.controllers.charts.augmentation.AugmentationChartController class method) (nirs4all.controllers.charts.exclusion.ExclusionChartController class method) (nirs4all.controllers.charts.ExclusionChartController class method) (nirs4all.controllers.charts.folds.FoldChartController class method) (nirs4all.controllers.charts.spectra.SpectraChartController class method) (nirs4all.controllers.charts.spectral_distribution.SpectralDistributionController class method) (nirs4all.controllers.charts.targets.YChartController class method) (nirs4all.controllers.ConcatAugmentationController class method) (nirs4all.controllers.controller.OperatorController class method) (nirs4all.controllers.CrossValidatorController class method) (nirs4all.controllers.data.auto_transfer_preproc.AutoTransferPreprocessingController class method) (nirs4all.controllers.data.AutoTransferPreprocessingController class method) (nirs4all.controllers.data.branch.BranchController class method) (nirs4all.controllers.data.concat_transform.ConcatAugmentationController class method) (nirs4all.controllers.data.ConcatAugmentationController class method) (nirs4all.controllers.data.feature_augmentation.FeatureAugmentationController class method) (nirs4all.controllers.data.feature_selection.FeatureSelectionController class method) (nirs4all.controllers.data.FeatureAugmentationController class method) (nirs4all.controllers.data.FeatureSelectionController class method) (nirs4all.controllers.data.merge.MergeController class method) (nirs4all.controllers.data.MergeController class method) (nirs4all.controllers.data.metadata_partitioner.MetadataPartitionerController class method) (nirs4all.controllers.data.MetadataPartitionerController class method) (nirs4all.controllers.data.outlier_excluder.OutlierExcluderController class method) (nirs4all.controllers.data.OutlierExcluderController class method) (nirs4all.controllers.data.repetition.RepToPPController class method) (nirs4all.controllers.data.repetition.RepToSourcesController class method) (nirs4all.controllers.data.RepToPPController class method) (nirs4all.controllers.data.RepToSourcesController class method) (nirs4all.controllers.data.resampler.ResamplerController class method) (nirs4all.controllers.data.ResamplerController class method) (nirs4all.controllers.data.sample_augmentation.SampleAugmentationController class method) (nirs4all.controllers.data.sample_filter.SampleFilterController class method) (nirs4all.controllers.data.sample_partitioner.SamplePartitionerController class method) (nirs4all.controllers.data.SampleAugmentationController class method) (nirs4all.controllers.data.SampleFilterController class method) (nirs4all.controllers.data.SamplePartitionerController class method) (nirs4all.controllers.data.source_branch.SourceBranchController class method) (nirs4all.controllers.data.SourceBranchController class method) (nirs4all.controllers.DummyController class method) (nirs4all.controllers.FeatureAugmentationController class method) (nirs4all.controllers.flow.dummy.DummyController class method) (nirs4all.controllers.flow.DummyController class method) (nirs4all.controllers.FoldChartController class method) (nirs4all.controllers.JaxModelController class method) (nirs4all.controllers.models.autogluon_model.AutoGluonModelController class method) (nirs4all.controllers.models.AutoGluonModelController class method) (nirs4all.controllers.models.jax_model.JaxModelController class method) (nirs4all.controllers.models.JaxModelController class method) (nirs4all.controllers.models.meta_model.MetaModelController class method) (nirs4all.controllers.models.MetaModelController class method) (nirs4all.controllers.models.PyTorchModelController class method) (nirs4all.controllers.models.sklearn_model.SklearnModelController class method) (nirs4all.controllers.models.SklearnModelController class method) (nirs4all.controllers.models.tensorflow_model.TensorFlowModelController class method) (nirs4all.controllers.models.TensorFlowModelController class method) (nirs4all.controllers.models.torch_model.PyTorchModelController class method) (nirs4all.controllers.OperatorController class method) (nirs4all.controllers.PyTorchModelController class method) (nirs4all.controllers.ResamplerController class method) (nirs4all.controllers.SampleAugmentationController class method) (nirs4all.controllers.SampleFilterController class method) (nirs4all.controllers.SklearnModelController class method) (nirs4all.controllers.SpectraChartController class method) (nirs4all.controllers.SpectralDistributionController class method) (nirs4all.controllers.splitters.fold_file_loader.FoldFileLoaderController class method) (nirs4all.controllers.splitters.FoldFileLoaderController class method) (nirs4all.controllers.splitters.split.CrossValidatorController class method) (nirs4all.controllers.TensorFlowModelController class method) (nirs4all.controllers.TransformerMixinController class method) (nirs4all.controllers.transforms.transformer.TransformerMixinController class method) (nirs4all.controllers.transforms.y_transformer.YTransformerMixinController class method) (nirs4all.controllers.YChartController class method) (nirs4all.controllers.YTransformerMixinController class method) matches_context() (nirs4all.pipeline.storage.artifacts.ArtifactRecord method) (nirs4all.pipeline.storage.artifacts.operator_chain.OperatorNode method) (nirs4all.pipeline.storage.artifacts.OperatorNode method) (nirs4all.pipeline.storage.artifacts.types.ArtifactRecord method) MatlabLoader (class in nirs4all.data.loaders) (class in nirs4all.data.loaders.matlab_loader) matmul (nirs4all.data.synthetic.accelerated.AcceleratedArrays attribute) (nirs4all.data.synthetic.AcceleratedArrays attribute) matrix_given_domain (nirs4all.data.synthetic.NIRSPriorConfig attribute), [1] (nirs4all.data.synthetic.prior.NIRSPriorConfig attribute), [1] MatrixBuilder (class in nirs4all.visualization.chart_utils) (class in nirs4all.visualization.chart_utils.matrix_builder) MatrixType (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.prior) MAX (nirs4all.data.aggregation.AggregationMethod attribute) (nirs4all.data.aggregation.aggregator.AggregationMethod attribute) max_combinations (nirs4all.data.synthetic.procedural.ProceduralComponentConfig attribute), [1] (nirs4all.data.synthetic.ProceduralComponentConfig attribute), [1] MAX_GENERATOR_VARIANTS_WARNING (nirs4all.controllers.models.stacking.branch_validator.BranchValidator attribute) (nirs4all.controllers.models.stacking.BranchValidator attribute) max_level (nirs4all.controllers.models.stacking.exceptions.MaxStackingLevelExceededError attribute) (nirs4all.controllers.models.stacking.MaxStackingLevelExceededError attribute) (nirs4all.controllers.models.stacking.multilevel.MultiLevelValidator attribute) (nirs4all.controllers.models.stacking.MultiLevelValidator attribute) (nirs4all.operators.models.meta.StackingConfig attribute), [1] (nirs4all.operators.models.StackingConfig attribute), [1] max_missing_fold_ratio (nirs4all.controllers.models.ReconstructorConfig attribute), [1] (nirs4all.controllers.models.stacking.config.ReconstructorConfig attribute), [1] (nirs4all.controllers.models.stacking.ReconstructorConfig attribute), [1] max_nan_ratio (nirs4all.operators.filters.spectral_quality.SpectralQualityFilter attribute) (nirs4all.operators.filters.SpectralQualityFilter attribute) MAX_NESTING_DEPTH (nirs4all.controllers.models.stacking.branch_validator.BranchValidator attribute) (nirs4all.controllers.models.stacking.BranchValidator attribute) max_overtone_order (nirs4all.data.synthetic.procedural.ProceduralComponentConfig attribute), [1] (nirs4all.data.synthetic.ProceduralComponentConfig attribute), [1] max_per_class (nirs4all.operators.models.DiversitySelector attribute) (nirs4all.operators.models.selection.DiversitySelector attribute) max_size_um (nirs4all.data.synthetic.ParticleSizeDistribution attribute), [1] (nirs4all.data.synthetic.scattering.ParticleSizeDistribution attribute), [1] max_value (nirs4all.data.synthetic.ConcentrationPrior attribute), [1] (nirs4all.data.synthetic.domains.ConcentrationPrior attribute), [1] (nirs4all.operators.filters.spectral_quality.SpectralQualityFilter attribute) (nirs4all.operators.filters.SpectralQualityFilter attribute) max_zero_ratio (nirs4all.operators.filters.spectral_quality.SpectralQualityFilter attribute) (nirs4all.operators.filters.SpectralQualityFilter attribute) MaxStackingLevelExceededError, [1] MBPLS (class in nirs4all.operators.models) (class in nirs4all.operators.models.sklearn) (class in nirs4all.operators.models.sklearn.mbpls) MCT (nirs4all.data.synthetic.DetectorType attribute) (nirs4all.data.synthetic.instruments.DetectorType attribute) MCUVE (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.feature_selection) MEAN (nirs4all.data.aggregation.AggregationMethod attribute) (nirs4all.data.aggregation.aggregator.AggregationMethod attribute) (nirs4all.data.schema.AggregateMethod attribute) (nirs4all.data.schema.config.AggregateMethod attribute) (nirs4all.operators.data.AggregationStrategy attribute), [1] (nirs4all.operators.data.merge.AggregationStrategy attribute), [1] (nirs4all.operators.models.meta.TestAggregation attribute), [1] (nirs4all.operators.models.TestAggregation attribute), [1] mean_abs_shap (nirs4all.api.ExplainResult property) (nirs4all.api.result.ExplainResult property) (nirs4all.ExplainResult property) mean_coefs_ (nirs4all.operators.transforms.feature_selection.MCUVE attribute) (nirs4all.operators.transforms.MCUVE attribute) mean_curvature (nirs4all.data.synthetic.fitter.SpectralProperties attribute), [1] (nirs4all.data.synthetic.SpectralProperties attribute), [1] mean_size_um (nirs4all.data.synthetic.ParticleSizeDistribution attribute), [1] (nirs4all.data.synthetic.scattering.ParticleSizeDistribution attribute), [1] mean_slope (nirs4all.data.synthetic.fitter.SpectralProperties attribute), [1] (nirs4all.data.synthetic.SpectralProperties attribute), [1] mean_spectrum (nirs4all.data.synthetic.fitter.SpectralProperties attribute), [1] (nirs4all.data.synthetic.SpectralProperties attribute), [1] measurement_mode (nirs4all.data.synthetic.BenchmarkDatasetInfo attribute), [1] (nirs4all.data.synthetic.benchmarks.BenchmarkDatasetInfo attribute), [1] (nirs4all.data.synthetic.DomainConfig attribute), [1] (nirs4all.data.synthetic.domains.DomainConfig attribute), [1] (nirs4all.data.synthetic.FittedParameters attribute), [1] (nirs4all.data.synthetic.fitter.FittedParameters attribute), [1] measurement_mode_confidence (nirs4all.data.synthetic.FittedParameters attribute), [1] (nirs4all.data.synthetic.fitter.FittedParameters attribute), [1] measurement_mode_simulator (nirs4all.data.synthetic.generator.SyntheticNIRSGenerator attribute) (nirs4all.data.synthetic.SyntheticNIRSGenerator attribute) MeasurementMode (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.measurement_modes) MeasurementModeConfig (class in nirs4all.data.synthetic.measurement_modes) MeasurementModeInference (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.fitter) MeasurementModeSimulator (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.measurement_modes) MEDIAN (nirs4all.data.aggregation.AggregationMethod attribute) (nirs4all.data.aggregation.aggregator.AggregationMethod attribute) (nirs4all.data.schema.AggregateMethod attribute) (nirs4all.data.schema.config.AggregateMethod attribute) MEMS (nirs4all.data.synthetic.DetectorType attribute) (nirs4all.data.synthetic.instruments.DetectorType attribute) merge() (nirs4all.controllers.models.stacking.reconstructor.ValidationResult method) (nirs4all.controllers.models.stacking.ValidationResult method) (nirs4all.controllers.models.ValidationResult method) (nirs4all.pipeline.config.generator.ValidationResult method) (nirs4all.pipeline.StepArtifacts method) (nirs4all.pipeline.trace.execution_trace.StepArtifacts method) (nirs4all.pipeline.trace.StepArtifacts method) merge_after (nirs4all.operators.data.merge.SourceBranchConfig attribute), [1] merge_branches() (nirs4all.controllers.data.merge.MergeController class method) (nirs4all.controllers.data.MergeController class method) merge_parquet_files() (nirs4all.data.Predictions class method) (nirs4all.data.predictions.Predictions class method) merge_predictions() (nirs4all.data.Predictions method) (nirs4all.data.predictions.Predictions method) merge_strategy (nirs4all.operators.data.merge.SourceBranchConfig attribute), [1] merge_type (nirs4all.controllers.data.merge.DisjointMergeMetadata attribute), [1] (nirs4all.operators.data.merge.DisjointMergeMetadata attribute), [1] merge_with() (nirs4all.data.LoadingParams method) (nirs4all.data.schema.config.LoadingParams method) (nirs4all.data.schema.LoadingParams method) merge_with_prefix() (nirs4all.pipeline.storage.artifacts.operator_chain.OperatorChain method) (nirs4all.pipeline.storage.artifacts.OperatorChain method) MergeConfig (class in nirs4all.operators.data) (class in nirs4all.operators.data.merge) MergeConfigParser (class in nirs4all.controllers.data) (class in nirs4all.controllers.data.merge) MergeController (class in nirs4all.controllers.data) (class in nirs4all.controllers.data.merge) merged_array (nirs4all.controllers.data.merge.DisjointMergeResult attribute), [1] MergeMode (class in nirs4all.operators.data) (class in nirs4all.operators.data.merge) message (nirs4all.controllers.models.stacking.exceptions.MetaModelError attribute) (nirs4all.controllers.models.stacking.MetaModelError attribute) (nirs4all.controllers.models.stacking.reconstructor.ValidationError attribute) (nirs4all.controllers.models.stacking.reconstructor.ValidationWarning attribute) (nirs4all.core.logging.events.LogEvent attribute), [1] (nirs4all.core.logging.LogEvent attribute), [1] (nirs4all.data.schema.validation.DiagnosticMessage attribute), [1] (nirs4all.data.schema.validation.error_codes.DiagnosticMessage attribute), [1] (nirs4all.data.schema.validation.ValidationError attribute), [1] (nirs4all.data.schema.validation.ValidationWarning attribute), [1] (nirs4all.data.schema.validation.validators.ValidationError attribute), [1] (nirs4all.data.schema.validation.validators.ValidationWarning attribute), [1] (nirs4all.data.schema.ValidationError attribute), [1] (nirs4all.data.schema.ValidationWarning attribute), [1] (nirs4all.data.ValidationError attribute), [1] (nirs4all.data.ValidationWarning attribute), [1] (nirs4all.pipeline.config.generator.ValidationError attribute), [1] message_template (nirs4all.data.schema.validation.error_codes.ErrorCode attribute), [1] (nirs4all.data.schema.validation.ErrorCode attribute), [1] messages (nirs4all.data.schema.validation.DiagnosticReport attribute), [1] (nirs4all.data.schema.validation.error_codes.DiagnosticReport attribute), [1] meta_config (nirs4all.pipeline.storage.artifacts.ArtifactRecord attribute), [1] (nirs4all.pipeline.storage.artifacts.types.ArtifactRecord attribute), [1] meta_feature_info (nirs4all.controllers.models.ReconstructionResult attribute), [1] (nirs4all.controllers.models.stacking.ReconstructionResult attribute), [1] (nirs4all.controllers.models.stacking.reconstructor.ReconstructionResult attribute), [1] meta_learner_class (nirs4all.controllers.models.stacking.MetaModelArtifact attribute), [1] (nirs4all.controllers.models.stacking.serialization.MetaModelArtifact attribute), [1] meta_model (nirs4all.controllers.models.stacking.CircularDependencyError attribute) (nirs4all.controllers.models.stacking.exceptions.CircularDependencyError attribute) (nirs4all.core.logging.context.StackContext attribute), [1] (nirs4all.core.logging.StackContext attribute), [1] META_MODEL (nirs4all.pipeline.storage.artifacts.ArtifactType attribute) (nirs4all.pipeline.storage.artifacts.types.ArtifactType attribute) meta_model_id (nirs4all.controllers.models.stacking.BranchMismatchError attribute) (nirs4all.controllers.models.stacking.exceptions.BranchMismatchError attribute) (nirs4all.controllers.models.stacking.exceptions.FeatureOrderMismatchError attribute) (nirs4all.controllers.models.stacking.exceptions.MissingDependencyError attribute) (nirs4all.controllers.models.stacking.exceptions.MissingSourceModelError attribute) (nirs4all.controllers.models.stacking.exceptions.NoSourcePredictionsError attribute) (nirs4all.controllers.models.stacking.FeatureOrderMismatchError attribute) (nirs4all.controllers.models.stacking.MissingDependencyError attribute) (nirs4all.controllers.models.stacking.MissingSourceModelError attribute) (nirs4all.controllers.models.stacking.NoSourcePredictionsError attribute) meta_model_name (nirs4all.controllers.models.stacking.MetaModelArtifact attribute), [1] (nirs4all.controllers.models.stacking.serialization.MetaModelArtifact attribute), [1] META_MODEL_PATTERNS (nirs4all.controllers.models.stacking.multilevel.MultiLevelValidator attribute) (nirs4all.controllers.models.stacking.MultiLevelValidator attribute) meta_model_type (nirs4all.controllers.models.stacking.MetaModelArtifact attribute), [1] (nirs4all.controllers.models.stacking.serialization.MetaModelArtifact attribute), [1] Metadata (class in nirs4all.data.metadata) metadata (nirs4all.api.PredictResult attribute), [1] (nirs4all.api.result.PredictResult attribute), [1] (nirs4all.controllers.models.components.prediction_assembler.PredictionRecord attribute) (nirs4all.controllers.models.components.PredictionRecord attribute) (nirs4all.data.ColumnConfig attribute) (nirs4all.data.performance.lazy_loader.LazyDataset property) (nirs4all.data.performance.LazyDataset property) (nirs4all.data.schema.ColumnConfig attribute) (nirs4all.data.schema.config.ColumnConfig attribute) (nirs4all.data.selection.role_assigner.RoleAssignmentResult attribute), [1] (nirs4all.data.synthetic.benchmarks.LoadedBenchmarkDataset attribute), [1] (nirs4all.data.synthetic.config.SyntheticDatasetConfig attribute), [1] (nirs4all.data.synthetic.LoadedBenchmarkDataset attribute), [1] (nirs4all.data.synthetic.MultiSourceResult attribute), [1] (nirs4all.data.synthetic.sources.MultiSourceResult attribute), [1] (nirs4all.data.synthetic.SyntheticDatasetConfig attribute), [1] (nirs4all.pipeline.bundle.BundleLoader attribute) (nirs4all.pipeline.bundle.loader.BundleLoader attribute) (nirs4all.pipeline.BundleLoader attribute) (nirs4all.pipeline.config.context.ExecutionContext attribute) (nirs4all.pipeline.config.ExecutionContext attribute) (nirs4all.pipeline.execution.ArtifactMeta attribute), [1] (nirs4all.pipeline.execution.result.ArtifactMeta attribute), [1] (nirs4all.pipeline.execution.result.StepOutput attribute), [1] (nirs4all.pipeline.ExecutionStep attribute), [1] (nirs4all.pipeline.ExecutionTrace attribute), [1] (nirs4all.pipeline.ExtractedPipeline attribute), [1] (nirs4all.pipeline.MinimalPipeline attribute), [1] (nirs4all.pipeline.RetrainConfig attribute), [1] (nirs4all.pipeline.retrainer.ExtractedPipeline attribute), [1] (nirs4all.pipeline.retrainer.RetrainConfig attribute), [1] (nirs4all.pipeline.StepArtifacts attribute), [1] (nirs4all.pipeline.steps.ParsedStep attribute), [1] (nirs4all.pipeline.steps.parser.ParsedStep attribute), [1] (nirs4all.pipeline.trace.execution_trace.ExecutionStep attribute), [1] (nirs4all.pipeline.trace.execution_trace.ExecutionTrace attribute), [1] (nirs4all.pipeline.trace.execution_trace.StepArtifacts attribute), [1] (nirs4all.pipeline.trace.ExecutionStep attribute), [1] (nirs4all.pipeline.trace.ExecutionTrace attribute), [1] (nirs4all.pipeline.trace.extractor.MinimalPipeline attribute), [1] (nirs4all.pipeline.trace.MinimalPipeline attribute), [1] (nirs4all.pipeline.trace.StepArtifacts attribute), [1] (nirs4all.PredictResult attribute), [1] (nirs4all.visualization.pipeline_diagram.PipelineNode attribute), [1] metadata() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.SpectroDataset method) metadata_accessor (nirs4all.data.dataset.SpectroDataset attribute) (nirs4all.data.SpectroDataset attribute) metadata_column() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.SpectroDataset method) metadata_columns (nirs4all.data.dataset.SpectroDataset property) (nirs4all.data.SpectroDataset property) metadata_indices (nirs4all.data.selection.role_assigner.RoleAssignmentResult attribute), [1] metadata_numeric() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.SpectroDataset method) METADATA_PARTITIONER (nirs4all.controllers.models.stacking.branch_validator.BranchType attribute) (nirs4all.controllers.models.stacking.BranchType attribute) (nirs4all.operators.data.BranchType attribute), [1] (nirs4all.operators.data.merge.BranchType attribute), [1] MetadataConfig (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.config) MetadataFilter (class in nirs4all.operators.filters) (class in nirs4all.operators.filters.metadata) MetadataGenerationResult (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.metadata) MetadataGenerator (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.metadata) MetadataPartitionConfig (class in nirs4all.controllers.data.metadata_partitioner) MetadataPartitionerController (class in nirs4all.controllers.data) (class in nirs4all.controllers.data.metadata_partitioner) MetaFeatureInfo (class in nirs4all.controllers.models.stacking) (class in nirs4all.controllers.models.stacking.classification) MetaModel (class in nirs4all.operators.models) (class in nirs4all.operators.models.meta) MetaModelArtifact (class in nirs4all.controllers.models.stacking) (class in nirs4all.controllers.models.stacking.serialization) MetaModelConfig (class in nirs4all.pipeline.storage.artifacts) (class in nirs4all.pipeline.storage.artifacts.types) MetaModelController (class in nirs4all.controllers.models) (class in nirs4all.controllers.models.meta_model) MetaModelError, [1] MetaModelPredictionError, [1] MetaModelSerializationError, [1] MetaModelSerializer (class in nirs4all.controllers.models.stacking) (class in nirs4all.controllers.models.stacking.serialization) method (nirs4all.data.aggregation.AggregationConfig attribute), [1] (nirs4all.data.aggregation.aggregator.AggregationConfig attribute), [1] (nirs4all.data.synthetic.ClassSeparationConfig attribute), [1] (nirs4all.data.synthetic.targets.ClassSeparationConfig attribute), [1] (nirs4all.operators.filters.high_leverage.HighLeverageFilter attribute) (nirs4all.operators.filters.HighLeverageFilter attribute) (nirs4all.operators.filters.x_outlier.XOutlierFilter attribute) (nirs4all.operators.filters.XOutlierFilter attribute) (nirs4all.operators.filters.y_outlier.YOutlierFilter attribute) (nirs4all.operators.filters.YOutlierFilter attribute) (nirs4all.operators.YOutlierFilter attribute) METHYL (nirs4all.data.synthetic.FunctionalGroupType attribute) (nirs4all.data.synthetic.procedural.FunctionalGroupType attribute) METHYLENE (nirs4all.data.synthetic.FunctionalGroupType attribute) (nirs4all.data.synthetic.procedural.FunctionalGroupType attribute) metric (nirs4all.controllers.models.components.PartitionScores attribute) (nirs4all.controllers.models.components.score_calculator.PartitionScores attribute) (nirs4all.controllers.models.stacking.serialization.SourceModelReference attribute), [1] (nirs4all.controllers.models.stacking.SourceModelReference attribute), [1] METRIC (nirs4all.core.logging.events.EventType attribute) (nirs4all.core.logging.EventType attribute) metric (nirs4all.data.synthetic.MetricResult attribute), [1] (nirs4all.data.synthetic.validation.MetricResult attribute), [1] (nirs4all.operators.data.BranchPredictionConfig attribute), [1] (nirs4all.operators.data.merge.BranchPredictionConfig attribute), [1] (nirs4all.operators.models.ModelCandidate attribute), [1] (nirs4all.operators.models.selection.ModelCandidate attribute), [1] (nirs4all.operators.models.selection.TopKByMetricSelector attribute) (nirs4all.operators.models.TopKByMetricSelector attribute) metric() (nirs4all.core.logging.config.Nirs4allLogger method) (nirs4all.core.logging.Nirs4allLogger method) metric_results (nirs4all.data.synthetic.SpectralRealismScore attribute), [1] (nirs4all.data.synthetic.validation.SpectralRealismScore attribute), [1] MetricResult (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.validation) metrics (nirs4all.analysis.results.TransferResult attribute), [1] (nirs4all.analysis.TransferResult attribute), [1] (nirs4all.core.logging.events.LogEvent attribute), [1] (nirs4all.core.logging.LogEvent attribute), [1] (nirs4all.visualization.analysis.branch.BranchSummary attribute) (nirs4all.visualization.analysis.BranchSummary attribute) (nirs4all.visualization.BranchSummary attribute) MIE_APPROX (nirs4all.data.synthetic.scattering.ScatteringModel attribute) (nirs4all.data.synthetic.ScatteringModel attribute) MILESTONES (nirs4all.core.logging.handlers.ThrottledHandler attribute) (nirs4all.core.logging.ThrottledHandler attribute) MIN (nirs4all.data.aggregation.AggregationMethod attribute) (nirs4all.data.aggregation.aggregator.AggregationMethod attribute) min_coverage_ratio (nirs4all.operators.models.meta.StackingConfig attribute), [1] (nirs4all.operators.models.StackingConfig attribute), [1] min_samples (nirs4all.controllers.data.metadata_partitioner.MetadataPartitionConfig attribute), [1] (nirs4all.data.aggregation.AggregationConfig attribute), [1] (nirs4all.data.aggregation.aggregator.AggregationConfig attribute), [1] min_size_um (nirs4all.data.synthetic.ParticleSizeDistribution attribute), [1] (nirs4all.data.synthetic.scattering.ParticleSizeDistribution attribute), [1] min_value (nirs4all.data.synthetic.ConcentrationPrior attribute), [1] (nirs4all.data.synthetic.domains.ConcentrationPrior attribute), [1] (nirs4all.operators.filters.spectral_quality.SpectralQualityFilter attribute) (nirs4all.operators.filters.SpectralQualityFilter attribute) min_variance (nirs4all.operators.filters.spectral_quality.SpectralQualityFilter attribute) (nirs4all.operators.filters.SpectralQualityFilter attribute) minimal_pipeline (nirs4all.pipeline.minimal_predictor.MinimalArtifactProvider attribute) (nirs4all.pipeline.MinimalArtifactProvider attribute) (nirs4all.pipeline.ResolvedPrediction attribute), [1] (nirs4all.pipeline.resolver.ResolvedPrediction attribute), [1] MinimalArtifactProvider (class in nirs4all.pipeline) (class in nirs4all.pipeline.minimal_predictor) MinimalPipeline (class in nirs4all.pipeline) (class in nirs4all.pipeline.trace) (class in nirs4all.pipeline.trace.extractor) MinimalPipelineStep (class in nirs4all.pipeline) (class in nirs4all.pipeline.trace) (class in nirs4all.pipeline.trace.extractor) MinimalPredictor (class in nirs4all.pipeline) (class in nirs4all.pipeline.minimal_predictor) missing_field() (nirs4all.data.schema.validation.DiagnosticBuilder method) (nirs4all.data.schema.validation.error_codes.DiagnosticBuilder method) missing_keys (nirs4all.data.selection.sample_linker.LinkingResult attribute), [1] MissingDependencyError, [1] MissingSourceModelError, [1] MixupAugmenter (class in nirs4all.operators.transforms) mode (nirs4all.data.synthetic.measurement_modes.MeasurementModeConfig attribute), [1] (nirs4all.operators.filters.base.CompositeFilter attribute) (nirs4all.operators.filters.CompositeFilter attribute) (nirs4all.pipeline.config.context.PipelineState attribute), [1] (nirs4all.pipeline.config.PipelineState attribute), [1] (nirs4all.pipeline.execution.executor.PipelineExecutor attribute) (nirs4all.pipeline.execution.orchestrator.PipelineOrchestrator attribute) (nirs4all.pipeline.execution.PipelineExecutor attribute) (nirs4all.pipeline.execution.PipelineOrchestrator attribute) (nirs4all.pipeline.PipelineRunner attribute) (nirs4all.pipeline.RetrainConfig attribute), [1] (nirs4all.pipeline.retrainer.RetrainConfig attribute), [1] (nirs4all.pipeline.retrainer.StepMode attribute), [1] (nirs4all.pipeline.runner.PipelineRunner attribute) (nirs4all.pipeline.StepMode attribute), [1] (nirs4all.pipeline.steps.step_runner.StepRunner attribute) (nirs4all.pipeline.steps.StepRunner attribute) (nirs4all.PipelineRunner attribute) mode1_cm (nirs4all.data.synthetic.CombinationBandResult attribute) (nirs4all.data.synthetic.wavenumber.CombinationBandResult attribute) mode2_cm (nirs4all.data.synthetic.CombinationBandResult attribute) (nirs4all.data.synthetic.wavenumber.CombinationBandResult attribute) mode_given_category (nirs4all.data.synthetic.NIRSPriorConfig attribute), [1] (nirs4all.data.synthetic.prior.NIRSPriorConfig attribute), [1]

MODEL (nirs4all.core.logging.events.EventType attribute) (nirs4all.core.logging.EventType attribute) model (nirs4all.data.synthetic.scattering.ScatteringEffectsConfig attribute), [1] (nirs4all.data.synthetic.ScatteringEffectsConfig attribute), [1] (nirs4all.operators.models.meta.MetaModel attribute) (nirs4all.operators.models.MetaModel attribute) MODEL (nirs4all.pipeline.storage.artifacts.ArtifactType attribute) (nirs4all.pipeline.storage.artifacts.types.ArtifactType attribute) model_ (nirs4all.sklearn.NIRSPipeline attribute) (nirs4all.sklearn.NIRSPipeline property) (nirs4all.sklearn.pipeline.NIRSPipeline attribute) (nirs4all.sklearn.pipeline.NIRSPipeline property) model_classname (nirs4all.controllers.models.stacking.serialization.SourceModelReference attribute), [1] (nirs4all.controllers.models.stacking.SourceModelReference attribute), [1] (nirs4all.operators.models.ModelCandidate attribute), [1] (nirs4all.operators.models.selection.ModelCandidate attribute), [1] model_config (nirs4all.data.ColumnConfig attribute) (nirs4all.data.DatasetConfigSchema attribute) (nirs4all.data.FileConfig attribute) (nirs4all.data.LoadingParams attribute) (nirs4all.data.PartitionConfig attribute) (nirs4all.data.schema.ColumnConfig attribute) (nirs4all.data.schema.config.ColumnConfig attribute) (nirs4all.data.schema.config.DatasetConfigSchema attribute) (nirs4all.data.schema.config.FileConfig attribute) (nirs4all.data.schema.config.FoldConfig attribute) (nirs4all.data.schema.config.FoldDefinition attribute) (nirs4all.data.schema.config.LoadingParams attribute) (nirs4all.data.schema.config.PartitionConfig attribute) (nirs4all.data.schema.config.PreprocessingApplied attribute) (nirs4all.data.schema.config.SharedMetadataConfig attribute) (nirs4all.data.schema.config.SharedTargetsConfig attribute) (nirs4all.data.schema.config.SourceConfig attribute) (nirs4all.data.schema.config.SourceFileConfig attribute) (nirs4all.data.schema.config.VariationConfig attribute) (nirs4all.data.schema.config.VariationFileConfig attribute) (nirs4all.data.schema.DatasetConfigSchema attribute) (nirs4all.data.schema.FileConfig attribute) (nirs4all.data.schema.FoldConfig attribute) (nirs4all.data.schema.FoldDefinition attribute) (nirs4all.data.schema.LoadingParams attribute) (nirs4all.data.schema.PartitionConfig attribute) (nirs4all.data.schema.PreprocessingApplied attribute) (nirs4all.data.schema.SharedMetadataConfig attribute) (nirs4all.data.schema.SharedTargetsConfig attribute) (nirs4all.data.schema.SourceConfig attribute) (nirs4all.data.schema.SourceFileConfig attribute) (nirs4all.data.schema.VariationConfig attribute) (nirs4all.data.schema.VariationFileConfig attribute) model_count (nirs4all.controllers.data.merge.BranchAnalysisResult attribute), [1] model_counts (nirs4all.controllers.data.merge.AsymmetryReport attribute), [1] MODEL_FILE (nirs4all.pipeline.resolver.SourceType attribute), [1] (nirs4all.pipeline.SourceType attribute), [1] model_filter (nirs4all.operators.data.merge.MergeConfig attribute), [1] (nirs4all.operators.data.MergeConfig attribute), [1] model_id (nirs4all.controllers.models.components.identifier_generator.ModelIdentifiers attribute) (nirs4all.controllers.models.components.ModelIdentifiers attribute) model_name (nirs4all.api.ExplainResult attribute), [1] (nirs4all.api.PredictResult attribute), [1] (nirs4all.api.result.ExplainResult attribute), [1] (nirs4all.api.result.PredictResult attribute), [1] (nirs4all.controllers.models.stacking.ModelLevelInfo attribute), [1] (nirs4all.controllers.models.stacking.multilevel.ModelLevelInfo attribute), [1] (nirs4all.controllers.models.stacking.serialization.SourceModelReference attribute), [1] (nirs4all.controllers.models.stacking.SourceModelReference attribute), [1] (nirs4all.data.PredictionResult property) (nirs4all.data.predictions.PredictionResult property) (nirs4all.ExplainResult attribute), [1] (nirs4all.operators.models.ModelCandidate attribute), [1] (nirs4all.operators.models.selection.ModelCandidate attribute), [1] (nirs4all.PredictResult attribute), [1] (nirs4all.sklearn.NIRSPipeline property) (nirs4all.sklearn.pipeline.NIRSPipeline property) model_names (nirs4all.controllers.data.merge.BranchAnalysisResult attribute), [1] (nirs4all.controllers.models.stacking.BranchPredictionInfo attribute), [1] (nirs4all.controllers.models.stacking.crossbranch.BranchPredictionInfo attribute), [1] (nirs4all.operators.models.ExplicitModelSelector attribute) (nirs4all.operators.models.selection.ExplicitModelSelector attribute) model_step_index (nirs4all.pipeline.bundle.BundleMetadata attribute), [1] (nirs4all.pipeline.bundle.loader.BundleMetadata attribute), [1] (nirs4all.pipeline.BundleMetadata attribute), [1] (nirs4all.pipeline.ExecutionTrace attribute), [1] (nirs4all.pipeline.ExtractedPipeline attribute), [1] (nirs4all.pipeline.MinimalPipeline attribute), [1] (nirs4all.pipeline.ResolvedPrediction attribute), [1] (nirs4all.pipeline.resolver.ResolvedPrediction attribute), [1] (nirs4all.pipeline.retrainer.ExtractedPipeline attribute), [1] (nirs4all.pipeline.trace.execution_trace.ExecutionTrace attribute), [1] (nirs4all.pipeline.trace.ExecutionTrace attribute), [1] (nirs4all.pipeline.trace.extractor.MinimalPipeline attribute), [1] (nirs4all.pipeline.trace.MinimalPipeline attribute), [1] (nirs4all.sklearn.NIRSPipeline attribute) (nirs4all.sklearn.NIRSPipeline property) (nirs4all.sklearn.pipeline.NIRSPipeline attribute) (nirs4all.sklearn.pipeline.NIRSPipeline property) ModelCandidate (class in nirs4all.operators.models) (class in nirs4all.operators.models.selection) ModelControllerUtils (class in nirs4all.controllers.models.utilities) ModelFactory (class in nirs4all.controllers.models.factory) ModelIdentifierGenerator (class in nirs4all.controllers.models.components) (class in nirs4all.controllers.models.components.identifier_generator) ModelIdentifiers (class in nirs4all.controllers.models.components) (class in nirs4all.controllers.models.components.identifier_generator) ModelLevelInfo (class in nirs4all.controllers.models.stacking) (class in nirs4all.controllers.models.stacking.multilevel) ModelSelector (class in nirs4all.controllers.data.merge) (class in nirs4all.controllers.shared) (class in nirs4all.controllers.shared.model_selector) ModelUtils (in module nirs4all.controllers.models.utilities) ModPoly (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.nirs) module nirs4all nirs4all.analysis nirs4all.analysis.presets nirs4all.analysis.results nirs4all.analysis.selector nirs4all.analysis.transfer_metrics nirs4all.analysis.transfer_utils nirs4all.api nirs4all.api.explain nirs4all.api.generate nirs4all.api.predict nirs4all.api.result nirs4all.api.retrain nirs4all.api.run nirs4all.api.session nirs4all.cli nirs4all.cli.commands nirs4all.cli.commands.artifacts nirs4all.cli.commands.config nirs4all.cli.commands.dataset nirs4all.cli.commands.workspace nirs4all.cli.installation_test nirs4all.cli.main nirs4all.config nirs4all.config.validator nirs4all.controllers nirs4all.controllers.base nirs4all.controllers.charts nirs4all.controllers.charts.augmentation nirs4all.controllers.charts.exclusion nirs4all.controllers.charts.folds nirs4all.controllers.charts.spectra nirs4all.controllers.charts.spectral_distribution nirs4all.controllers.charts.targets nirs4all.controllers.controller nirs4all.controllers.data nirs4all.controllers.data.auto_transfer_preproc nirs4all.controllers.data.balancing nirs4all.controllers.data.branch nirs4all.controllers.data.concat_transform nirs4all.controllers.data.feature_augmentation nirs4all.controllers.data.feature_selection nirs4all.controllers.data.merge nirs4all.controllers.data.metadata_partitioner nirs4all.controllers.data.outlier_excluder nirs4all.controllers.data.repetition nirs4all.controllers.data.resampler nirs4all.controllers.data.sample_augmentation nirs4all.controllers.data.sample_filter nirs4all.controllers.data.sample_partitioner nirs4all.controllers.data.source_branch nirs4all.controllers.flow nirs4all.controllers.flow.condition nirs4all.controllers.flow.dummy nirs4all.controllers.flow.scope nirs4all.controllers.flow.sequential nirs4all.controllers.models nirs4all.controllers.models.autogluon_model nirs4all.controllers.models.base_model nirs4all.controllers.models.components nirs4all.controllers.models.components.identifier_generator nirs4all.controllers.models.components.index_normalizer nirs4all.controllers.models.components.prediction_assembler nirs4all.controllers.models.components.prediction_transformer nirs4all.controllers.models.components.score_calculator nirs4all.controllers.models.factory nirs4all.controllers.models.jax_model nirs4all.controllers.models.jax_wrapper nirs4all.controllers.models.meta_model nirs4all.controllers.models.sklearn_model nirs4all.controllers.models.stacking nirs4all.controllers.models.stacking.branch_validator nirs4all.controllers.models.stacking.classification nirs4all.controllers.models.stacking.config nirs4all.controllers.models.stacking.crossbranch nirs4all.controllers.models.stacking.exceptions nirs4all.controllers.models.stacking.multilevel nirs4all.controllers.models.stacking.reconstructor nirs4all.controllers.models.stacking.serialization nirs4all.controllers.models.tensorflow nirs4all.controllers.models.tensorflow.config nirs4all.controllers.models.tensorflow.data_prep nirs4all.controllers.models.tensorflow_model nirs4all.controllers.models.torch_model nirs4all.controllers.models.utilities nirs4all.controllers.presets nirs4all.controllers.registry nirs4all.controllers.shared nirs4all.controllers.shared.model_selector nirs4all.controllers.shared.prediction_aggregator nirs4all.controllers.splitters nirs4all.controllers.splitters.fold_file_loader nirs4all.controllers.splitters.split nirs4all.controllers.transforms nirs4all.controllers.transforms.cluster nirs4all.controllers.transforms.transformer nirs4all.controllers.transforms.y_transformer nirs4all.core nirs4all.core.config nirs4all.core.exceptions nirs4all.core.logging nirs4all.core.logging.config nirs4all.core.logging.context nirs4all.core.logging.events nirs4all.core.logging.formatters nirs4all.core.logging.handlers nirs4all.core.logging.progress nirs4all.core.metrics nirs4all.core.task_detection nirs4all.core.task_type nirs4all.core.validation nirs4all.data nirs4all.data.aggregation nirs4all.data.aggregation.aggregator nirs4all.data.binning nirs4all.data.config nirs4all.data.config_parser nirs4all.data.dataset nirs4all.data.detection nirs4all.data.detection.detector nirs4all.data.ensemble_utils nirs4all.data.features nirs4all.data.indexer nirs4all.data.io nirs4all.data.loaders nirs4all.data.loaders.archive_loader nirs4all.data.loaders.base nirs4all.data.loaders.csv_loader nirs4all.data.loaders.csv_loader_new nirs4all.data.loaders.excel_loader nirs4all.data.loaders.loader nirs4all.data.loaders.matlab_loader nirs4all.data.loaders.numpy_loader nirs4all.data.loaders.parquet_loader nirs4all.data.metadata nirs4all.data.parsers nirs4all.data.parsers.base nirs4all.data.parsers.files_parser nirs4all.data.parsers.folder_parser nirs4all.data.parsers.legacy_parser nirs4all.data.parsers.normalizer nirs4all.data.partition nirs4all.data.partition.partition_assigner nirs4all.data.performance nirs4all.data.performance.cache nirs4all.data.performance.lazy_loader nirs4all.data.predictions nirs4all.data.schema nirs4all.data.schema.config nirs4all.data.schema.validation nirs4all.data.schema.validation.error_codes nirs4all.data.schema.validation.validators nirs4all.data.selection nirs4all.data.selection.column_selector nirs4all.data.selection.role_assigner nirs4all.data.selection.row_selector nirs4all.data.selection.sample_linker nirs4all.data.serialization nirs4all.data.serialization.serializer nirs4all.data.signal_type nirs4all.data.synthetic nirs4all.data.synthetic.accelerated nirs4all.data.synthetic.benchmarks nirs4all.data.synthetic.builder nirs4all.data.synthetic.components nirs4all.data.synthetic.config nirs4all.data.synthetic.detectors nirs4all.data.synthetic.domains nirs4all.data.synthetic.environmental nirs4all.data.synthetic.exporter nirs4all.data.synthetic.fitter nirs4all.data.synthetic.generator nirs4all.data.synthetic.instruments nirs4all.data.synthetic.measurement_modes nirs4all.data.synthetic.metadata nirs4all.data.synthetic.prior nirs4all.data.synthetic.procedural nirs4all.data.synthetic.scattering nirs4all.data.synthetic.sources nirs4all.data.synthetic.targets nirs4all.data.synthetic.validation nirs4all.data.synthetic.wavenumber nirs4all.data.targets nirs4all.data.types nirs4all.operators nirs4all.operators.data nirs4all.operators.data.merge nirs4all.operators.data.repetition nirs4all.operators.filters nirs4all.operators.filters.base nirs4all.operators.filters.high_leverage nirs4all.operators.filters.metadata nirs4all.operators.filters.report nirs4all.operators.filters.spectral_quality nirs4all.operators.filters.x_outlier nirs4all.operators.filters.y_outlier nirs4all.operators.models nirs4all.operators.models.base nirs4all.operators.models.meta nirs4all.operators.models.selection nirs4all.operators.models.sklearn nirs4all.operators.models.sklearn.dipls nirs4all.operators.models.sklearn.fckpls nirs4all.operators.models.sklearn.ikpls nirs4all.operators.models.sklearn.ipls nirs4all.operators.models.sklearn.kopls nirs4all.operators.models.sklearn.lwpls nirs4all.operators.models.sklearn.mbpls nirs4all.operators.models.sklearn.nlpls nirs4all.operators.models.sklearn.oklmpls nirs4all.operators.models.sklearn.opls nirs4all.operators.models.sklearn.oplsda nirs4all.operators.models.sklearn.plsda nirs4all.operators.models.sklearn.recursive_pls nirs4all.operators.models.sklearn.robust_pls nirs4all.operators.models.sklearn.simpls nirs4all.operators.models.sklearn.sparsepls nirs4all.operators.splitters nirs4all.operators.splitters.grouped_wrapper nirs4all.operators.splitters.splitters nirs4all.operators.transforms nirs4all.operators.transforms.feature_selection nirs4all.operators.transforms.features nirs4all.operators.transforms.nirs nirs4all.operators.transforms.presets nirs4all.operators.transforms.resampler nirs4all.operators.transforms.scalers nirs4all.operators.transforms.signal nirs4all.operators.transforms.signal_conversion nirs4all.operators.transforms.targets nirs4all.pipeline nirs4all.pipeline.bundle nirs4all.pipeline.bundle.generator nirs4all.pipeline.bundle.loader nirs4all.pipeline.config nirs4all.pipeline.config.component_serialization nirs4all.pipeline.config.context nirs4all.pipeline.config.generator nirs4all.pipeline.config.pipeline_config nirs4all.pipeline.execution nirs4all.pipeline.execution.builder nirs4all.pipeline.execution.executor nirs4all.pipeline.execution.orchestrator nirs4all.pipeline.execution.result nirs4all.pipeline.explainer nirs4all.pipeline.minimal_predictor nirs4all.pipeline.predictor nirs4all.pipeline.resolver nirs4all.pipeline.retrainer nirs4all.pipeline.runner nirs4all.pipeline.steps nirs4all.pipeline.steps.parser nirs4all.pipeline.steps.router nirs4all.pipeline.steps.step_runner nirs4all.pipeline.storage nirs4all.pipeline.storage.artifacts nirs4all.pipeline.storage.artifacts.artifact_loader nirs4all.pipeline.storage.artifacts.artifact_persistence nirs4all.pipeline.storage.artifacts.artifact_registry nirs4all.pipeline.storage.artifacts.operator_chain nirs4all.pipeline.storage.artifacts.types nirs4all.pipeline.storage.artifacts.utils nirs4all.pipeline.storage.io nirs4all.pipeline.storage.io_exporter nirs4all.pipeline.storage.io_resolver nirs4all.pipeline.storage.io_writer nirs4all.pipeline.storage.library nirs4all.pipeline.storage.manifest_manager nirs4all.pipeline.trace nirs4all.pipeline.trace.execution_trace nirs4all.pipeline.trace.extractor nirs4all.pipeline.trace.recorder nirs4all.sklearn nirs4all.sklearn.classifier nirs4all.sklearn.pipeline nirs4all.utils nirs4all.utils.backend nirs4all.utils.header_units nirs4all.utils.reproducibility nirs4all.utils.spinner nirs4all.visualization nirs4all.visualization.analysis nirs4all.visualization.analysis.branch nirs4all.visualization.analysis.shap nirs4all.visualization.analysis.transfer nirs4all.visualization.branch_diagram nirs4all.visualization.chart_utils nirs4all.visualization.chart_utils.aggregator nirs4all.visualization.chart_utils.annotator nirs4all.visualization.chart_utils.matrix_builder nirs4all.visualization.chart_utils.normalizer nirs4all.visualization.chart_utils.predictions_adapter nirs4all.visualization.charts nirs4all.visualization.charts.base nirs4all.visualization.charts.candlestick nirs4all.visualization.charts.config nirs4all.visualization.charts.confusion_matrix nirs4all.visualization.charts.heatmap nirs4all.visualization.charts.histogram nirs4all.visualization.charts.top_k_comparison nirs4all.visualization.pipeline_diagram nirs4all.visualization.prediction_cache nirs4all.visualization.predictions nirs4all.visualization.reports nirs4all.workspace nirs4all.workspace.library_manager moisture (nirs4all.data.synthetic.environmental.EnvironmentalEffectsConfig attribute), [1] (nirs4all.data.synthetic.EnvironmentalEffectsConfig attribute), [1] moisture_config (nirs4all.data.synthetic.FittedParameters attribute), [1] (nirs4all.data.synthetic.fitter.FittedParameters attribute), [1] moisture_content (nirs4all.data.synthetic.environmental.MoistureConfig attribute), [1] (nirs4all.data.synthetic.MoistureConfig attribute), [1] moisture_sim (nirs4all.data.synthetic.environmental.EnvironmentalEffectsSimulator attribute) (nirs4all.data.synthetic.EnvironmentalEffectsSimulator attribute) MoistureConfig (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.environmental) MoistureEffectSimulator (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.environmental) monochromator_type (nirs4all.data.synthetic.InstrumentArchetype attribute), [1] (nirs4all.data.synthetic.instruments.InstrumentArchetype attribute), [1] MonochromatorType (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.instruments) msc() (in module nirs4all.operators) (in module nirs4all.operators.transforms) (in module nirs4all.operators.transforms.nirs) msc_correctable (nirs4all.data.synthetic.fitter.ScatteringInference attribute), [1] (nirs4all.data.synthetic.ScatteringInference attribute), [1] MSE (nirs4all.operators.data.DisjointSelectionCriterion attribute), [1] (nirs4all.operators.data.merge.DisjointSelectionCriterion attribute), [1] multi_regime (nirs4all.data.synthetic.config.SyntheticDatasetConfig attribute) (nirs4all.data.synthetic.SyntheticDatasetConfig attribute) multi_scan (nirs4all.data.synthetic.InstrumentArchetype attribute), [1] (nirs4all.data.synthetic.instruments.InstrumentArchetype attribute), [1] multi_sensor (nirs4all.data.synthetic.InstrumentArchetype attribute), [1] (nirs4all.data.synthetic.instruments.InstrumentArchetype attribute), [1] multi_source() (in module nirs4all.api.generate) MULTICLASS_CLASSIFICATION (nirs4all.controllers.models.stacking.classification.StackingTaskType attribute), [1] (nirs4all.controllers.models.stacking.StackingTaskType attribute), [1] (nirs4all.core.task_type.TaskType attribute) (nirs4all.core.TaskType attribute) (nirs4all.data.schema.config.TaskType attribute) (nirs4all.data.schema.TaskType attribute) (nirs4all.data.TaskType attribute) MultiLevelProgress (class in nirs4all.core.logging) (class in nirs4all.core.logging.progress) MultiLevelStackingError, [1] MultiLevelValidator (class in nirs4all.controllers.models.stacking) (class in nirs4all.controllers.models.stacking.multilevel) multiplicative_scatter_std (nirs4all.data.synthetic.EMSCConfig attribute), [1] (nirs4all.data.synthetic.fitter.ScatteringInference attribute), [1] (nirs4all.data.synthetic.scattering.EMSCConfig attribute), [1] (nirs4all.data.synthetic.ScatteringInference attribute), [1] MultiplicativeNoise (class in nirs4all.operators.transforms) MultiplicativeScatterCorrection (class in nirs4all.operators) (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.nirs) MultiRegimeConfig (class in nirs4all.data.synthetic.config) MultiScanConfig (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.instruments) MultiSensorConfig (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.instruments) MultiSourceGenerator (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.sources) MultiSourceResult (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.sources)

N

N4A (nirs4all.pipeline.bundle.BundleFormat attribute), [1] (nirs4all.pipeline.bundle.generator.BundleFormat attribute), [1] (nirs4all.pipeline.BundleFormat attribute), [1] N4A_PY (nirs4all.pipeline.bundle.BundleFormat attribute), [1] (nirs4all.pipeline.bundle.generator.BundleFormat attribute), [1] (nirs4all.pipeline.BundleFormat attribute), [1] n_augmented_excluded (nirs4all.operators.filters.FilteringReport attribute), [1] (nirs4all.operators.filters.report.FilteringReport attribute), [1] n_batches (nirs4all.data.synthetic.BatchEffectConfig attribute), [1] (nirs4all.data.synthetic.builder.BuilderState attribute) (nirs4all.data.synthetic.config.BatchEffectConfig attribute), [1] n_bio_samples (nirs4all.data.synthetic.metadata.MetadataGenerationResult attribute), [1] (nirs4all.data.synthetic.MetadataGenerationResult attribute), [1] n_branches (nirs4all.core.logging.context.StackContext attribute), [1] (nirs4all.core.logging.StackContext attribute), [1] n_classes (nirs4all.controllers.models.stacking.classification.ClassificationInfo attribute), [1] (nirs4all.controllers.models.stacking.classification.StackingTaskType property) (nirs4all.controllers.models.stacking.ClassificationInfo attribute), [1] (nirs4all.controllers.models.stacking.MetaModelArtifact attribute) (nirs4all.controllers.models.stacking.serialization.MetaModelArtifact attribute) (nirs4all.controllers.models.stacking.StackingTaskType property) (nirs4all.data.synthetic.builder.BuilderState attribute) n_classes_range (nirs4all.data.synthetic.NIRSPriorConfig attribute) (nirs4all.data.synthetic.prior.NIRSPriorConfig attribute) n_columns (nirs4all.controllers.data.merge.DisjointMergeMetadata attribute), [1] (nirs4all.controllers.data.merge.DisjointMergeResult attribute), [1] (nirs4all.data.detection.DetectionResult attribute), [1] (nirs4all.data.detection.detector.DetectionResult attribute), [1] (nirs4all.operators.data.merge.DisjointMergeMetadata attribute), [1] (nirs4all.operators.data.merge.MergeConfig attribute) (nirs4all.operators.data.MergeConfig attribute) n_components (nirs4all.data.synthetic.ComponentLibrary property) (nirs4all.data.synthetic.components.ComponentLibrary property) (nirs4all.data.synthetic.config.FeatureConfig attribute), [1] (nirs4all.data.synthetic.FeatureConfig attribute), [1] (nirs4all.operators.filters.x_outlier.XOutlierFilter attribute) (nirs4all.operators.filters.XOutlierFilter attribute) n_components_ (nirs4all.operators.models.DiPLS attribute) (nirs4all.operators.models.IKPLS attribute) (nirs4all.operators.models.MBPLS attribute) (nirs4all.operators.models.OKLMPLS attribute) (nirs4all.operators.models.RecursivePLS attribute) (nirs4all.operators.models.RobustPLS attribute) (nirs4all.operators.models.SIMPLS attribute) (nirs4all.operators.models.sklearn.DiPLS attribute) (nirs4all.operators.models.sklearn.dipls.DiPLS attribute) (nirs4all.operators.models.sklearn.IKPLS attribute) (nirs4all.operators.models.sklearn.ikpls.IKPLS attribute) (nirs4all.operators.models.sklearn.MBPLS attribute) (nirs4all.operators.models.sklearn.mbpls.MBPLS attribute) (nirs4all.operators.models.sklearn.OKLMPLS attribute) (nirs4all.operators.models.sklearn.oklmpls.OKLMPLS attribute) (nirs4all.operators.models.sklearn.recursive_pls.RecursivePLS attribute) (nirs4all.operators.models.sklearn.RecursivePLS attribute) (nirs4all.operators.models.sklearn.robust_pls.RobustPLS attribute) (nirs4all.operators.models.sklearn.RobustPLS attribute) (nirs4all.operators.models.sklearn.SIMPLS attribute) (nirs4all.operators.models.sklearn.simpls.SIMPLS attribute) (nirs4all.operators.models.sklearn.SparsePLS attribute) (nirs4all.operators.models.sklearn.sparsepls.SparsePLS attribute) (nirs4all.operators.models.SparsePLS attribute) n_components_range (nirs4all.data.synthetic.DomainConfig attribute), [1] (nirs4all.data.synthetic.domains.DomainConfig attribute), [1] n_confounders (nirs4all.data.synthetic.builder.BuilderState attribute) (nirs4all.data.synthetic.config.ConfounderConfig attribute), [1] (nirs4all.data.synthetic.targets.NonLinearTargetConfig attribute), [1] n_excluded (nirs4all.controllers.data.outlier_excluder.OutlierExclusionResult attribute) (nirs4all.operators.filters.FilterResult attribute), [1] (nirs4all.operators.filters.report.FilterResult attribute), [1] n_features (nirs4all.data.performance.lazy_loader.LazyDataset property) (nirs4all.data.performance.LazyDataset property) (nirs4all.data.synthetic.SourceConfig attribute), [1] (nirs4all.data.synthetic.sources.SourceConfig attribute), [1] n_features_in_ (nirs4all.operators.models.DiPLS attribute) (nirs4all.operators.models.FCKPLS attribute) (nirs4all.operators.models.IKPLS attribute) (nirs4all.operators.models.MBPLS attribute) (nirs4all.operators.models.OKLMPLS attribute) (nirs4all.operators.models.OPLSDA attribute) (nirs4all.operators.models.RecursivePLS attribute) (nirs4all.operators.models.RobustPLS attribute) (nirs4all.operators.models.SIMPLS attribute) (nirs4all.operators.models.sklearn.DiPLS attribute) (nirs4all.operators.models.sklearn.dipls.DiPLS attribute) (nirs4all.operators.models.sklearn.FCKPLS attribute) (nirs4all.operators.models.sklearn.fckpls.FCKPLS attribute) (nirs4all.operators.models.sklearn.IKPLS attribute) (nirs4all.operators.models.sklearn.ikpls.IKPLS attribute) (nirs4all.operators.models.sklearn.MBPLS attribute) (nirs4all.operators.models.sklearn.mbpls.MBPLS attribute) (nirs4all.operators.models.sklearn.OKLMPLS attribute) (nirs4all.operators.models.sklearn.oklmpls.OKLMPLS attribute) (nirs4all.operators.models.sklearn.OPLSDA attribute) (nirs4all.operators.models.sklearn.oplsda.OPLSDA attribute) (nirs4all.operators.models.sklearn.recursive_pls.RecursivePLS attribute) (nirs4all.operators.models.sklearn.RecursivePLS attribute) (nirs4all.operators.models.sklearn.robust_pls.RobustPLS attribute) (nirs4all.operators.models.sklearn.RobustPLS attribute) (nirs4all.operators.models.sklearn.SIMPLS attribute) (nirs4all.operators.models.sklearn.simpls.SIMPLS attribute) (nirs4all.operators.models.sklearn.SparsePLS attribute) (nirs4all.operators.models.sklearn.sparsepls.SparsePLS attribute) (nirs4all.operators.models.SparsePLS attribute) (nirs4all.operators.transforms.CARS attribute) (nirs4all.operators.transforms.feature_selection.CARS attribute) (nirs4all.operators.transforms.feature_selection.MCUVE attribute) (nirs4all.operators.transforms.MCUVE attribute) (nirs4all.operators.transforms.nirs.PyBaselineCorrection attribute) (nirs4all.operators.transforms.PyBaselineCorrection attribute) (nirs4all.operators.transforms.Resampler attribute) (nirs4all.operators.transforms.resampler.Resampler attribute) n_features_out_ (nirs4all.operators.models.FCKPLS attribute) (nirs4all.operators.models.sklearn.FCKPLS attribute) (nirs4all.operators.models.sklearn.fckpls.FCKPLS attribute) (nirs4all.operators.transforms.CARS attribute) (nirs4all.operators.transforms.feature_selection.CARS attribute) (nirs4all.operators.transforms.feature_selection.MCUVE attribute) (nirs4all.operators.transforms.MCUVE attribute) (nirs4all.operators.transforms.nirs.WaveletFeatures attribute) (nirs4all.operators.transforms.nirs.WaveletPCA attribute) (nirs4all.operators.transforms.nirs.WaveletSVD attribute) (nirs4all.operators.transforms.Resampler attribute) (nirs4all.operators.transforms.resampler.Resampler attribute) (nirs4all.operators.transforms.WaveletFeatures attribute) (nirs4all.operators.transforms.WaveletPCA attribute) (nirs4all.operators.transforms.WaveletSVD attribute) n_features_per_model (nirs4all.controllers.models.stacking.classification.MetaFeatureInfo attribute), [1] (nirs4all.controllers.models.stacking.MetaFeatureInfo attribute), [1] n_features_total (nirs4all.data.synthetic.MultiSourceResult property) (nirs4all.data.synthetic.sources.MultiSourceResult property) n_final_excluded (nirs4all.operators.filters.FilteringReport attribute), [1] (nirs4all.operators.filters.report.FilteringReport attribute), [1] n_final_kept (nirs4all.operators.filters.FilteringReport attribute), [1] (nirs4all.operators.filters.report.FilteringReport attribute), [1] n_folds (nirs4all.controllers.models.ReconstructionResult attribute), [1] (nirs4all.controllers.models.stacking.BranchPredictionInfo attribute), [1] (nirs4all.controllers.models.stacking.crossbranch.BranchPredictionInfo attribute), [1] (nirs4all.controllers.models.stacking.MetaModelArtifact attribute), [1] (nirs4all.controllers.models.stacking.ReconstructionResult attribute), [1] (nirs4all.controllers.models.stacking.reconstructor.ReconstructionResult attribute), [1] (nirs4all.controllers.models.stacking.serialization.MetaModelArtifact attribute), [1] (nirs4all.sklearn.NIRSPipeline property) (nirs4all.sklearn.pipeline.NIRSPipeline property) n_fundamental_bands (nirs4all.data.synthetic.procedural.ProceduralComponentConfig attribute), [1] (nirs4all.data.synthetic.ProceduralComponentConfig attribute), [1] n_groups (nirs4all.data.synthetic.builder.BuilderState attribute) (nirs4all.data.synthetic.config.MetadataConfig attribute), [1] (nirs4all.data.synthetic.MetadataConfig attribute), [1] n_iter_ (nirs4all.operators.models.OKLMPLS attribute) (nirs4all.operators.models.sklearn.OKLMPLS attribute) (nirs4all.operators.models.sklearn.oklmpls.OKLMPLS attribute) n_kept (nirs4all.operators.filters.FilterResult attribute), [1] (nirs4all.operators.filters.report.FilterResult attribute), [1] n_kernels_ (nirs4all.operators.models.FractionalConvFeaturizer attribute) (nirs4all.operators.models.sklearn.fckpls.FractionalConvFeaturizer attribute) (nirs4all.operators.models.sklearn.FractionalConvFeaturizer attribute) n_models_original (nirs4all.controllers.data.merge.DisjointBranchInfo attribute), [1] (nirs4all.operators.data.merge.DisjointBranchInfo attribute), [1] n_models_selected (nirs4all.controllers.data.merge.DisjointBranchInfo attribute), [1] (nirs4all.operators.data.merge.DisjointBranchInfo attribute), [1] n_peaks_mean (nirs4all.data.synthetic.fitter.SpectralProperties attribute), [1] (nirs4all.data.synthetic.SpectralProperties attribute), [1] n_real_samples (nirs4all.data.synthetic.DatasetComparisonResult attribute), [1] (nirs4all.data.synthetic.validation.DatasetComparisonResult attribute), [1] n_reflections (nirs4all.data.synthetic.ATRConfig attribute), [1] (nirs4all.data.synthetic.measurement_modes.ATRConfig attribute), [1] n_regimes (nirs4all.data.synthetic.builder.BuilderState attribute) (nirs4all.data.synthetic.config.MultiRegimeConfig attribute), [1] (nirs4all.data.synthetic.targets.NonLinearTargetConfig attribute), [1] n_repetitions (nirs4all.data.synthetic.builder.BuilderState attribute) (nirs4all.data.synthetic.config.MetadataConfig attribute), [1] (nirs4all.data.synthetic.MetadataConfig attribute), [1] n_rows (nirs4all.data.detection.DetectionResult attribute), [1] (nirs4all.data.detection.detector.DetectionResult attribute), [1] n_samples (nirs4all.api.ExplainResult attribute), [1] (nirs4all.api.result.ExplainResult attribute), [1] (nirs4all.controllers.data.merge.DisjointBranchInfo attribute), [1] (nirs4all.controllers.models.stacking.branch_validator.BranchInfo attribute) (nirs4all.controllers.models.stacking.BranchInfo attribute) (nirs4all.controllers.models.stacking.BranchPredictionInfo attribute), [1] (nirs4all.controllers.models.stacking.crossbranch.BranchPredictionInfo attribute), [1] (nirs4all.data.performance.lazy_loader.LazyDataset property) (nirs4all.data.performance.LazyDataset property) (nirs4all.data.synthetic.BenchmarkDatasetInfo attribute), [1] (nirs4all.data.synthetic.benchmarks.BenchmarkDatasetInfo attribute), [1] (nirs4all.data.synthetic.builder.BuilderState attribute) (nirs4all.data.synthetic.config.SyntheticDatasetConfig attribute), [1] (nirs4all.data.synthetic.fitter.SpectralProperties attribute), [1] (nirs4all.data.synthetic.MultiSourceResult property) (nirs4all.data.synthetic.sources.MultiSourceResult property) (nirs4all.data.synthetic.SpectralProperties attribute), [1] (nirs4all.data.synthetic.SyntheticDatasetConfig attribute), [1] (nirs4all.ExplainResult attribute), [1] (nirs4all.operators.data.merge.DisjointBranchInfo attribute), [1] (nirs4all.operators.filters.FilterResult attribute), [1] (nirs4all.operators.filters.report.FilterResult attribute), [1] n_samples_a (nirs4all.controllers.models.stacking.CrossPartitionStackingError attribute) (nirs4all.controllers.models.stacking.exceptions.CrossPartitionStackingError attribute) n_samples_b (nirs4all.controllers.models.stacking.CrossPartitionStackingError attribute) (nirs4all.controllers.models.stacking.exceptions.CrossPartitionStackingError attribute) n_samples_range (nirs4all.data.synthetic.NIRSPriorConfig attribute) (nirs4all.data.synthetic.prior.NIRSPriorConfig attribute) n_samples_seen_ (nirs4all.operators.models.RecursivePLS attribute) (nirs4all.operators.models.sklearn.recursive_pls.RecursivePLS attribute) (nirs4all.operators.models.sklearn.RecursivePLS attribute) n_scans (nirs4all.data.synthetic.instruments.MultiScanConfig attribute), [1] (nirs4all.data.synthetic.MultiScanConfig attribute), [1] n_sources (nirs4all.data.dataset.SpectroDataset property) (nirs4all.data.SpectroDataset property) n_synthetic_samples (nirs4all.data.synthetic.DatasetComparisonResult attribute), [1] (nirs4all.data.synthetic.validation.DatasetComparisonResult attribute), [1] n_targets (nirs4all.data.synthetic.config.TargetConfig attribute), [1] (nirs4all.data.synthetic.TargetConfig attribute), [1] n_targets_range (nirs4all.data.synthetic.NIRSPriorConfig attribute) (nirs4all.data.synthetic.prior.NIRSPriorConfig attribute) n_total (nirs4all.controllers.data.outlier_excluder.OutlierExclusionResult attribute) n_total_samples (nirs4all.operators.filters.FilteringReport attribute), [1] (nirs4all.operators.filters.report.FilteringReport attribute), [1] n_variables_history_ (nirs4all.operators.transforms.CARS attribute) (nirs4all.operators.transforms.feature_selection.CARS attribute) n_variants (nirs4all.controllers.models.stacking.exceptions.GeneratorSyntaxStackingWarning attribute) (nirs4all.controllers.models.stacking.GeneratorSyntaxStackingWarning attribute) n_wavelengths (nirs4all.data.synthetic.BenchmarkDatasetInfo attribute), [1] (nirs4all.data.synthetic.benchmarks.BenchmarkDatasetInfo attribute), [1] (nirs4all.data.synthetic.fitter.SpectralProperties attribute), [1] (nirs4all.data.synthetic.generator.SyntheticNIRSGenerator attribute) (nirs4all.data.synthetic.SpectralProperties attribute), [1] (nirs4all.data.synthetic.SyntheticNIRSGenerator attribute) na_mask (nirs4all.data.loaders.base.LoaderResult attribute) (nirs4all.data.loaders.LoaderResult attribute) na_policy (nirs4all.data.LoadingParams attribute) (nirs4all.data.schema.config.LoadingParams attribute) (nirs4all.data.schema.LoadingParams attribute) name (nirs4all.analysis.results.TransferResult attribute), [1] (nirs4all.analysis.TransferResult attribute), [1] (nirs4all.api.Session attribute) (nirs4all.api.Session property) (nirs4all.api.session.Session attribute) (nirs4all.api.session.Session property) (nirs4all.controllers.models.components.identifier_generator.ModelIdentifiers attribute) (nirs4all.controllers.models.components.ModelIdentifiers attribute) (nirs4all.core.logging.BranchContext attribute), [1] (nirs4all.core.logging.context.BranchContext attribute), [1] (nirs4all.core.logging.context.SourceContext attribute), [1] (nirs4all.core.logging.SourceContext attribute), [1] (nirs4all.data.dataset.SpectroDataset attribute) (nirs4all.data.DatasetConfigSchema attribute) (nirs4all.data.loaders.archive_loader.EnhancedZipLoader attribute) (nirs4all.data.loaders.archive_loader.TarLoader attribute) (nirs4all.data.loaders.base.FileLoader attribute) (nirs4all.data.loaders.csv_loader_new.CSVLoader attribute) (nirs4all.data.loaders.CSVLoader attribute) (nirs4all.data.loaders.EnhancedZipLoader attribute) (nirs4all.data.loaders.excel_loader.ExcelLoader attribute) (nirs4all.data.loaders.ExcelLoader attribute) (nirs4all.data.loaders.FileLoader attribute) (nirs4all.data.loaders.matlab_loader.MatlabLoader attribute) (nirs4all.data.loaders.MatlabLoader attribute) (nirs4all.data.loaders.numpy_loader.NumpyLoader attribute) (nirs4all.data.loaders.NumpyLoader attribute) (nirs4all.data.loaders.parquet_loader.ParquetLoader attribute) (nirs4all.data.loaders.ParquetLoader attribute) (nirs4all.data.loaders.TarLoader attribute) (nirs4all.data.schema.config.DatasetConfigSchema attribute) (nirs4all.data.schema.config.SourceConfig attribute) (nirs4all.data.schema.config.VariationConfig attribute) (nirs4all.data.schema.DatasetConfigSchema attribute) (nirs4all.data.schema.SourceConfig attribute) (nirs4all.data.schema.VariationConfig attribute) (nirs4all.data.SpectroDataset attribute) (nirs4all.data.synthetic.BenchmarkDatasetInfo attribute), [1] (nirs4all.data.synthetic.benchmarks.BenchmarkDatasetInfo attribute), [1] (nirs4all.data.synthetic.builder.BuilderState attribute) (nirs4all.data.synthetic.components.NIRBand attribute), [1] (nirs4all.data.synthetic.components.SpectralComponent attribute), [1] (nirs4all.data.synthetic.config.SyntheticDatasetConfig attribute), [1] (nirs4all.data.synthetic.DomainConfig attribute), [1] (nirs4all.data.synthetic.domains.DomainConfig attribute), [1] (nirs4all.data.synthetic.fitter.SpectralProperties attribute), [1] (nirs4all.data.synthetic.InstrumentArchetype attribute), [1] (nirs4all.data.synthetic.instruments.InstrumentArchetype attribute), [1] (nirs4all.data.synthetic.NIRBand attribute), [1] (nirs4all.data.synthetic.SourceConfig attribute), [1] (nirs4all.data.synthetic.sources.SourceConfig attribute), [1] (nirs4all.data.synthetic.SpectralComponent attribute), [1] (nirs4all.data.synthetic.SpectralProperties attribute), [1] (nirs4all.data.synthetic.SyntheticDatasetConfig attribute), [1] (nirs4all.operators.models.meta.MetaModel property) (nirs4all.operators.models.MetaModel property) (nirs4all.pipeline.execution.ArtifactMeta attribute), [1] (nirs4all.pipeline.execution.result.ArtifactMeta attribute), [1] (nirs4all.pipeline.storage.artifacts.artifact_persistence.ArtifactMeta attribute) (nirs4all.Session attribute) (nirs4all.Session property) names (nirs4all.data.selection.column_selector.SelectionResult attribute), [1] NAPolicy (class in nirs4all.data.schema) (class in nirs4all.data.schema.config) ndim (nirs4all.data.performance.lazy_loader.LazyArray property) (nirs4all.data.performance.LazyArray property) NESTED (nirs4all.controllers.models.stacking.branch_validator.BranchType attribute) (nirs4all.controllers.models.stacking.BranchType attribute) NestedBranchStackingError, [1] nesting_depth (nirs4all.controllers.models.stacking.branch_validator.BranchInfo attribute) (nirs4all.controllers.models.stacking.BranchInfo attribute) new_model (nirs4all.pipeline.RetrainConfig attribute), [1] (nirs4all.pipeline.retrainer.RetrainConfig attribute), [1] next_artifact_load_index() (nirs4all.pipeline.config.context.RuntimeContext method) (nirs4all.pipeline.config.RuntimeContext method) next_op() (nirs4all.pipeline.config.context.RuntimeContext method) (nirs4all.pipeline.config.RuntimeContext method) (nirs4all.pipeline.execution.executor.PipelineExecutor method) (nirs4all.pipeline.execution.PipelineExecutor method) (nirs4all.pipeline.PipelineRunner method) (nirs4all.pipeline.runner.PipelineRunner method) (nirs4all.PipelineRunner method) next_processing_index() (nirs4all.pipeline.config.context.RuntimeContext method) (nirs4all.pipeline.config.RuntimeContext method) next_row_index() (nirs4all.data.indexer.Indexer method) next_sample_index() (nirs4all.data.indexer.Indexer method) NH_COMBINATION (nirs4all.data.synthetic.environmental.SpectralRegion attribute) (nirs4all.data.synthetic.SpectralRegion attribute) NH_FIRST_OVERTONE (nirs4all.data.synthetic.environmental.SpectralRegion attribute) (nirs4all.data.synthetic.SpectralRegion attribute) nicon_set() (in module nirs4all.operators.transforms) (in module nirs4all.operators.transforms.presets) NIRBand (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.components) nirs4all module nirs4all.analysis module nirs4all.analysis.presets module nirs4all.analysis.results module nirs4all.analysis.selector module nirs4all.analysis.transfer_metrics module nirs4all.analysis.transfer_utils module nirs4all.api module nirs4all.api.explain module nirs4all.api.generate module nirs4all.api.predict module nirs4all.api.result module nirs4all.api.retrain module nirs4all.api.run module nirs4all.api.session module nirs4all.cli module nirs4all.cli.commands module nirs4all.cli.commands.artifacts module nirs4all.cli.commands.config module nirs4all.cli.commands.dataset module nirs4all.cli.commands.workspace module nirs4all.cli.installation_test module nirs4all.cli.main module nirs4all.config module nirs4all.config.validator module nirs4all.controllers module nirs4all.controllers.base module nirs4all.controllers.charts module nirs4all.controllers.charts.augmentation module nirs4all.controllers.charts.exclusion module nirs4all.controllers.charts.folds module nirs4all.controllers.charts.spectra module nirs4all.controllers.charts.spectral_distribution module nirs4all.controllers.charts.targets module nirs4all.controllers.controller module nirs4all.controllers.data module nirs4all.controllers.data.auto_transfer_preproc module nirs4all.controllers.data.balancing module nirs4all.controllers.data.branch module nirs4all.controllers.data.concat_transform module nirs4all.controllers.data.feature_augmentation module nirs4all.controllers.data.feature_selection module nirs4all.controllers.data.merge module nirs4all.controllers.data.metadata_partitioner module nirs4all.controllers.data.outlier_excluder module nirs4all.controllers.data.repetition module nirs4all.controllers.data.resampler module nirs4all.controllers.data.sample_augmentation module nirs4all.controllers.data.sample_filter module nirs4all.controllers.data.sample_partitioner module nirs4all.controllers.data.source_branch module nirs4all.controllers.flow module nirs4all.controllers.flow.condition module nirs4all.controllers.flow.dummy module nirs4all.controllers.flow.scope module nirs4all.controllers.flow.sequential module nirs4all.controllers.models module nirs4all.controllers.models.autogluon_model module nirs4all.controllers.models.base_model module nirs4all.controllers.models.components module nirs4all.controllers.models.components.identifier_generator module nirs4all.controllers.models.components.index_normalizer module nirs4all.controllers.models.components.prediction_assembler module nirs4all.controllers.models.components.prediction_transformer module nirs4all.controllers.models.components.score_calculator module nirs4all.controllers.models.factory module nirs4all.controllers.models.jax_model module nirs4all.controllers.models.jax_wrapper module nirs4all.controllers.models.meta_model module nirs4all.controllers.models.sklearn_model module nirs4all.controllers.models.stacking module nirs4all.controllers.models.stacking.branch_validator module nirs4all.controllers.models.stacking.classification module nirs4all.controllers.models.stacking.config module nirs4all.controllers.models.stacking.crossbranch module nirs4all.controllers.models.stacking.exceptions module nirs4all.controllers.models.stacking.multilevel module nirs4all.controllers.models.stacking.reconstructor module nirs4all.controllers.models.stacking.serialization module nirs4all.controllers.models.tensorflow module nirs4all.controllers.models.tensorflow.config module nirs4all.controllers.models.tensorflow.data_prep module nirs4all.controllers.models.tensorflow_model module nirs4all.controllers.models.torch_model module nirs4all.controllers.models.utilities module nirs4all.controllers.presets module nirs4all.controllers.registry module nirs4all.controllers.shared module nirs4all.controllers.shared.model_selector module nirs4all.controllers.shared.prediction_aggregator module nirs4all.controllers.splitters module nirs4all.controllers.splitters.fold_file_loader module nirs4all.controllers.splitters.split module nirs4all.controllers.transforms module nirs4all.controllers.transforms.cluster module nirs4all.controllers.transforms.transformer module nirs4all.controllers.transforms.y_transformer module nirs4all.core module nirs4all.core.config module nirs4all.core.exceptions module nirs4all.core.logging module nirs4all.core.logging.config module nirs4all.core.logging.context module nirs4all.core.logging.events module nirs4all.core.logging.formatters module nirs4all.core.logging.handlers module nirs4all.core.logging.progress module nirs4all.core.metrics module nirs4all.core.task_detection module nirs4all.core.task_type module nirs4all.core.validation module nirs4all.data module nirs4all.data.aggregation module nirs4all.data.aggregation.aggregator module

nirs4all.data.binning module nirs4all.data.config module nirs4all.data.config_parser module nirs4all.data.dataset module nirs4all.data.detection module nirs4all.data.detection.detector module nirs4all.data.ensemble_utils module nirs4all.data.features module nirs4all.data.indexer module nirs4all.data.io module nirs4all.data.loaders module nirs4all.data.loaders.archive_loader module nirs4all.data.loaders.base module nirs4all.data.loaders.csv_loader module nirs4all.data.loaders.csv_loader_new module nirs4all.data.loaders.excel_loader module nirs4all.data.loaders.loader module nirs4all.data.loaders.matlab_loader module nirs4all.data.loaders.numpy_loader module nirs4all.data.loaders.parquet_loader module nirs4all.data.metadata module nirs4all.data.parsers module nirs4all.data.parsers.base module nirs4all.data.parsers.files_parser module nirs4all.data.parsers.folder_parser module nirs4all.data.parsers.legacy_parser module nirs4all.data.parsers.normalizer module nirs4all.data.partition module nirs4all.data.partition.partition_assigner module nirs4all.data.performance module nirs4all.data.performance.cache module nirs4all.data.performance.lazy_loader module nirs4all.data.predictions module nirs4all.data.schema module nirs4all.data.schema.config module nirs4all.data.schema.validation module nirs4all.data.schema.validation.error_codes module nirs4all.data.schema.validation.validators module nirs4all.data.selection module nirs4all.data.selection.column_selector module nirs4all.data.selection.role_assigner module nirs4all.data.selection.row_selector module nirs4all.data.selection.sample_linker module nirs4all.data.serialization module nirs4all.data.serialization.serializer module nirs4all.data.signal_type module nirs4all.data.synthetic module nirs4all.data.synthetic.accelerated module nirs4all.data.synthetic.benchmarks module nirs4all.data.synthetic.builder module nirs4all.data.synthetic.components module nirs4all.data.synthetic.config module nirs4all.data.synthetic.detectors module nirs4all.data.synthetic.domains module nirs4all.data.synthetic.environmental module nirs4all.data.synthetic.exporter module nirs4all.data.synthetic.fitter module nirs4all.data.synthetic.generator module nirs4all.data.synthetic.instruments module nirs4all.data.synthetic.measurement_modes module nirs4all.data.synthetic.metadata module nirs4all.data.synthetic.prior module nirs4all.data.synthetic.procedural module nirs4all.data.synthetic.scattering module nirs4all.data.synthetic.sources module nirs4all.data.synthetic.targets module nirs4all.data.synthetic.validation module nirs4all.data.synthetic.wavenumber module nirs4all.data.targets module nirs4all.data.types module nirs4all.operators module nirs4all.operators.data module nirs4all.operators.data.merge module nirs4all.operators.data.repetition module nirs4all.operators.filters module nirs4all.operators.filters.base module nirs4all.operators.filters.high_leverage module nirs4all.operators.filters.metadata module nirs4all.operators.filters.report module nirs4all.operators.filters.spectral_quality module nirs4all.operators.filters.x_outlier module nirs4all.operators.filters.y_outlier module nirs4all.operators.models module nirs4all.operators.models.base module nirs4all.operators.models.meta module nirs4all.operators.models.selection module nirs4all.operators.models.sklearn module nirs4all.operators.models.sklearn.dipls module nirs4all.operators.models.sklearn.fckpls module nirs4all.operators.models.sklearn.ikpls module nirs4all.operators.models.sklearn.ipls module nirs4all.operators.models.sklearn.kopls module nirs4all.operators.models.sklearn.lwpls module nirs4all.operators.models.sklearn.mbpls module nirs4all.operators.models.sklearn.nlpls module nirs4all.operators.models.sklearn.oklmpls module nirs4all.operators.models.sklearn.opls module nirs4all.operators.models.sklearn.oplsda module nirs4all.operators.models.sklearn.plsda module nirs4all.operators.models.sklearn.recursive_pls module nirs4all.operators.models.sklearn.robust_pls module nirs4all.operators.models.sklearn.simpls module nirs4all.operators.models.sklearn.sparsepls module nirs4all.operators.splitters module nirs4all.operators.splitters.grouped_wrapper module nirs4all.operators.splitters.splitters module nirs4all.operators.transforms module nirs4all.operators.transforms.feature_selection module nirs4all.operators.transforms.features module nirs4all.operators.transforms.nirs module nirs4all.operators.transforms.presets module nirs4all.operators.transforms.resampler module nirs4all.operators.transforms.scalers module nirs4all.operators.transforms.signal module nirs4all.operators.transforms.signal_conversion module nirs4all.operators.transforms.targets module nirs4all.pipeline module nirs4all.pipeline.bundle module nirs4all.pipeline.bundle.generator module nirs4all.pipeline.bundle.loader module nirs4all.pipeline.config module nirs4all.pipeline.config.component_serialization module nirs4all.pipeline.config.context module nirs4all.pipeline.config.generator module nirs4all.pipeline.config.pipeline_config module nirs4all.pipeline.execution module nirs4all.pipeline.execution.builder module nirs4all.pipeline.execution.executor module nirs4all.pipeline.execution.orchestrator module nirs4all.pipeline.execution.result module nirs4all.pipeline.explainer module nirs4all.pipeline.minimal_predictor module nirs4all.pipeline.predictor module nirs4all.pipeline.resolver module nirs4all.pipeline.retrainer module nirs4all.pipeline.runner module nirs4all.pipeline.steps module nirs4all.pipeline.steps.parser module nirs4all.pipeline.steps.router module nirs4all.pipeline.steps.step_runner module nirs4all.pipeline.storage module nirs4all.pipeline.storage.artifacts module nirs4all.pipeline.storage.artifacts.artifact_loader module nirs4all.pipeline.storage.artifacts.artifact_persistence module nirs4all.pipeline.storage.artifacts.artifact_registry module nirs4all.pipeline.storage.artifacts.operator_chain module nirs4all.pipeline.storage.artifacts.types module nirs4all.pipeline.storage.artifacts.utils module nirs4all.pipeline.storage.io module nirs4all.pipeline.storage.io_exporter module nirs4all.pipeline.storage.io_resolver module nirs4all.pipeline.storage.io_writer module nirs4all.pipeline.storage.library module nirs4all.pipeline.storage.manifest_manager module nirs4all.pipeline.trace module nirs4all.pipeline.trace.execution_trace module nirs4all.pipeline.trace.extractor module nirs4all.pipeline.trace.recorder module nirs4all.sklearn module nirs4all.sklearn.classifier module nirs4all.sklearn.pipeline module nirs4all.utils module nirs4all.utils.backend module nirs4all.utils.header_units module nirs4all.utils.reproducibility module nirs4all.utils.spinner module nirs4all.visualization module nirs4all.visualization.analysis module nirs4all.visualization.analysis.branch module nirs4all.visualization.analysis.shap module nirs4all.visualization.analysis.transfer module nirs4all.visualization.branch_diagram module nirs4all.visualization.chart_utils module nirs4all.visualization.chart_utils.aggregator module nirs4all.visualization.chart_utils.annotator module nirs4all.visualization.chart_utils.matrix_builder module nirs4all.visualization.chart_utils.normalizer module nirs4all.visualization.chart_utils.predictions_adapter module nirs4all.visualization.charts module nirs4all.visualization.charts.base module nirs4all.visualization.charts.candlestick module nirs4all.visualization.charts.config module nirs4all.visualization.charts.confusion_matrix module nirs4all.visualization.charts.heatmap module nirs4all.visualization.charts.histogram module nirs4all.visualization.charts.top_k_comparison module nirs4all.visualization.pipeline_diagram module nirs4all.visualization.prediction_cache module nirs4all.visualization.predictions module nirs4all.visualization.reports module nirs4all.workspace module nirs4all.workspace.library_manager module nirs4all_version (nirs4all.pipeline.bundle.BundleMetadata attribute), [1] (nirs4all.pipeline.bundle.loader.BundleMetadata attribute), [1] (nirs4all.pipeline.BundleMetadata attribute), [1] (nirs4all.pipeline.execution.ArtifactMeta attribute), [1] (nirs4all.pipeline.execution.result.ArtifactMeta attribute), [1] (nirs4all.pipeline.storage.artifacts.artifact_persistence.ArtifactMeta attribute) (nirs4all.pipeline.storage.artifacts.ArtifactRecord attribute), [1] (nirs4all.pipeline.storage.artifacts.types.ArtifactRecord attribute), [1] Nirs4allLogger (class in nirs4all.core.logging) (class in nirs4all.core.logging.config) NIRSPipeline (class in nirs4all.sklearn) (class in nirs4all.sklearn.pipeline) NIRSPipelineClassifier (class in nirs4all.sklearn) (class in nirs4all.sklearn.classifier) NIRSPriorConfig (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.prior) NLPLS (in module nirs4all.operators.models) (in module nirs4all.operators.models.sklearn) (in module nirs4all.operators.models.sklearn.nlpls) node_count (nirs4all.pipeline.config.generator.ValidationResult attribute), [1] NODE_STYLES (nirs4all.visualization.branch_diagram.PipelineDiagram attribute) (nirs4all.visualization.pipeline_diagram.PipelineDiagram attribute) (nirs4all.visualization.PipelineDiagram attribute) node_type (nirs4all.visualization.pipeline_diagram.PipelineNode attribute), [1] nodes (nirs4all.pipeline.storage.artifacts.operator_chain.OperatorChain attribute), [1] (nirs4all.pipeline.storage.artifacts.OperatorChain attribute), [1] (nirs4all.visualization.branch_diagram.PipelineDiagram attribute) (nirs4all.visualization.pipeline_diagram.PipelineDiagram attribute) noise (nirs4all.data.synthetic.ClassSeparationConfig attribute), [1] (nirs4all.data.synthetic.targets.ClassSeparationConfig attribute), [1] noise_base (nirs4all.data.synthetic.FittedParameters attribute), [1] (nirs4all.data.synthetic.fitter.FittedParameters attribute), [1] noise_correlation_length (nirs4all.data.synthetic.fitter.SpectralProperties attribute), [1] (nirs4all.data.synthetic.SpectralProperties attribute), [1] noise_estimate (nirs4all.data.synthetic.fitter.SpectralProperties attribute), [1] (nirs4all.data.synthetic.SpectralProperties attribute), [1] noise_heteroscedasticity (nirs4all.data.synthetic.builder.BuilderState attribute) (nirs4all.data.synthetic.config.MultiRegimeConfig attribute), [1] (nirs4all.data.synthetic.targets.NonLinearTargetConfig attribute), [1] noise_level (nirs4all.data.synthetic.DomainConfig attribute), [1] (nirs4all.data.synthetic.domains.DomainConfig attribute), [1] (nirs4all.data.synthetic.instruments.SensorConfig attribute), [1] (nirs4all.data.synthetic.SensorConfig attribute), [1] noise_level_range (nirs4all.data.synthetic.NIRSPriorConfig attribute), [1] (nirs4all.data.synthetic.prior.NIRSPriorConfig attribute), [1] noise_model (nirs4all.data.synthetic.DetectorConfig attribute), [1] (nirs4all.data.synthetic.detectors.DetectorConfig attribute), [1] noise_signal_dep (nirs4all.data.synthetic.FittedParameters attribute), [1] (nirs4all.data.synthetic.fitter.FittedParameters attribute), [1] noise_stability_ (nirs4all.operators.transforms.feature_selection.MCUVE attribute) (nirs4all.operators.transforms.MCUVE attribute) NoiseModelConfig (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.detectors) NONE (nirs4all.controllers.models.stacking.branch_validator.BranchType attribute) (nirs4all.controllers.models.stacking.BranchType attribute) (nirs4all.data.HeaderUnit attribute) (nirs4all.data.schema.CategoricalMode attribute) (nirs4all.data.schema.config.CategoricalMode attribute) (nirs4all.data.schema.config.HeaderUnit attribute) (nirs4all.data.schema.HeaderUnit attribute) nonlinear (nirs4all.data.synthetic.config.SyntheticDatasetConfig attribute) (nirs4all.data.synthetic.SyntheticDatasetConfig attribute) nonlinear_interactions (nirs4all.data.synthetic.builder.BuilderState attribute) (nirs4all.data.synthetic.targets.NonLinearTargetConfig attribute), [1] NonLinearConfig (class in nirs4all.data.synthetic.config) nonlinearity_coefficient (nirs4all.data.synthetic.DetectorConfig attribute), [1] (nirs4all.data.synthetic.detectors.DetectorConfig attribute), [1] NonLinearTargetConfig (class in nirs4all.data.synthetic.targets) NonLinearTargetProcessor (class in nirs4all.data.synthetic.targets) Normalize (class in nirs4all.operators) (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.scalers) normalize() (nirs4all.controllers.models.components.index_normalizer.IndexNormalizer method) (nirs4all.controllers.models.components.IndexNormalizer method) (nirs4all.data.ConfigNormalizer method) (nirs4all.data.parsers.ConfigNormalizer method) (nirs4all.data.parsers.normalizer.ConfigNormalizer method) (nirs4all.visualization.chart_utils.normalizer.ScoreNormalizer static method) (nirs4all.visualization.chart_utils.ScoreNormalizer static method) normalize_aggregate_method() (nirs4all.data.DatasetConfigSchema class method) (nirs4all.data.schema.config.DatasetConfigSchema class method) (nirs4all.data.schema.DatasetConfigSchema class method) normalize_batch() (nirs4all.controllers.models.components.index_normalizer.IndexNormalizer method) (nirs4all.controllers.models.components.IndexNormalizer method) normalize_config() (in module nirs4all.data) (in module nirs4all.data.parsers) (in module nirs4all.data.parsers.normalizer) normalize_config_keys() (in module nirs4all.data.config_parser) (in module nirs4all.data.parsers.legacy_parser) normalize_generator_spec() (nirs4all.controllers.ConcatAugmentationController static method) (nirs4all.controllers.data.concat_transform.ConcatAugmentationController static method) (nirs4all.controllers.data.ConcatAugmentationController static method) (nirs4all.controllers.data.feature_augmentation.FeatureAugmentationController static method) (nirs4all.controllers.data.FeatureAugmentationController static method) (nirs4all.controllers.data.sample_augmentation.SampleAugmentationController static method) (nirs4all.controllers.data.SampleAugmentationController static method) (nirs4all.controllers.FeatureAugmentationController static method) (nirs4all.controllers.SampleAugmentationController static method) normalize_header_unit() (in module nirs4all.data) (nirs4all.data.LoadingParams class method) (nirs4all.data.schema.config.LoadingParams class method) (nirs4all.data.schema.LoadingParams class method) normalize_layout() (in module nirs4all.data) normalize_preprocessing() (in module nirs4all.analysis) (in module nirs4all.analysis.transfer_utils) normalize_preprocessing_list() (in module nirs4all.analysis) (in module nirs4all.analysis.transfer_utils) normalize_signal_type() (in module nirs4all.data) (in module nirs4all.data.signal_type) (nirs4all.data.LoadingParams class method) (nirs4all.data.schema.config.LoadingParams class method) (nirs4all.data.schema.LoadingParams class method) normalize_task_type() (nirs4all.data.DatasetConfigSchema class method) (nirs4all.data.schema.config.DatasetConfigSchema class method) (nirs4all.data.schema.DatasetConfigSchema class method) normalize_variation_mode() (nirs4all.data.DatasetConfigSchema class method) (nirs4all.data.schema.config.DatasetConfigSchema class method) (nirs4all.data.schema.DatasetConfigSchema class method) normalize_weights() (nirs4all.data.synthetic.NIRSPriorConfig method) (nirs4all.data.synthetic.prior.NIRSPriorConfig method) normalized_config (nirs4all.data.schema.validation.ValidationResult attribute), [1] (nirs4all.data.schema.validation.validators.ValidationResult attribute), [1] (nirs4all.data.schema.ValidationResult attribute), [1] (nirs4all.data.ValidationResult attribute), [1] norml() (in module nirs4all.operators) (in module nirs4all.operators.transforms) (in module nirs4all.operators.transforms.scalers) NoSourcePredictionsError, [1] NOT_APPLICABLE (nirs4all.controllers.models.stacking.crossbranch.CrossBranchCompatibility attribute) (nirs4all.controllers.models.stacking.CrossBranchCompatibility attribute) NOT_SUPPORTED (nirs4all.controllers.models.stacking.branch_validator.StackingCompatibility attribute) (nirs4all.controllers.models.stacking.StackingCompatibility attribute) notes (nirs4all.data.synthetic.BenchmarkDatasetInfo attribute), [1] (nirs4all.data.synthetic.benchmarks.BenchmarkDatasetInfo attribute), [1] NullHandler (class in nirs4all.core.logging) (class in nirs4all.core.logging.handlers) num_2d_features (nirs4all.data.FeatureSource property) num_classes (nirs4all.data.dataset.SpectroDataset property) (nirs4all.data.SpectroDataset property) (nirs4all.data.targets.Targets attribute) (nirs4all.data.targets.Targets property) num_features (nirs4all.data.dataset.SpectroDataset property) (nirs4all.data.features.Features property) (nirs4all.data.FeatureSource property) (nirs4all.data.SpectroDataset property) num_folds (nirs4all.data.dataset.SpectroDataset property) (nirs4all.data.SpectroDataset property) num_predictions (nirs4all.api.result.RunResult property) (nirs4all.api.RunResult property) (nirs4all.data.Predictions property) (nirs4all.data.predictions.Predictions property) (nirs4all.RunResult property) num_processings (nirs4all.data.features.Features property) (nirs4all.data.FeatureSource property) (nirs4all.data.targets.Targets attribute) (nirs4all.data.targets.Targets property) num_rows (nirs4all.data.metadata.Metadata property) num_samples (nirs4all.data.dataset.SpectroDataset property) (nirs4all.data.features.Features property) (nirs4all.data.FeatureSource property) (nirs4all.data.SpectroDataset property) (nirs4all.data.targets.Targets attribute) (nirs4all.data.targets.Targets property) num_targets (nirs4all.data.targets.Targets attribute) (nirs4all.data.targets.Targets property) NUMPY (nirs4all.data.synthetic.accelerated.AcceleratorBackend attribute) (nirs4all.data.synthetic.AcceleratorBackend attribute) NumpyLoader (class in nirs4all.data.loaders) (class in nirs4all.data.loaders.numpy_loader)

O

offset_std (nirs4all.data.synthetic.BatchEffectConfig attribute), [1] (nirs4all.data.synthetic.config.BatchEffectConfig attribute), [1] oh_band_positions (nirs4all.data.synthetic.fitter.SpectralProperties attribute), [1] (nirs4all.data.synthetic.SpectralProperties attribute), [1] OH_COMBINATION (nirs4all.data.synthetic.environmental.SpectralRegion attribute) (nirs4all.data.synthetic.SpectralRegion attribute) OH_FIRST_OVERTONE (nirs4all.data.synthetic.environmental.SpectralRegion attribute) (nirs4all.data.synthetic.SpectralRegion attribute) OKLMPLS (class in nirs4all.operators.models) (class in nirs4all.operators.models.sklearn) (class in nirs4all.operators.models.sklearn.oklmpls) on_incompatible (nirs4all.controllers.data.merge.SourceMergeConfig attribute), [1] (nirs4all.operators.data.merge.SourceMergeConfig attribute), [1] (nirs4all.operators.data.SourceMergeConfig attribute), [1] on_missing (nirs4all.operators.data.merge.MergeConfig attribute), [1] (nirs4all.operators.data.MergeConfig attribute), [1] on_shape_mismatch (nirs4all.operators.data.merge.MergeConfig attribute), [1] (nirs4all.operators.data.MergeConfig attribute), [1] on_unequal (nirs4all.operators.data.repetition.RepetitionConfig attribute), [1] (nirs4all.operators.data.RepetitionConfig attribute), [1] ones (nirs4all.data.synthetic.accelerated.AcceleratedArrays attribute) (nirs4all.data.synthetic.AcceleratedArrays attribute) op_counter (nirs4all.data.PredictionResult property) (nirs4all.data.predictions.PredictionResult property) operation_count (nirs4all.pipeline.config.context.RuntimeContext attribute), [1] (nirs4all.pipeline.config.RuntimeContext attribute), [1] operation_counter (nirs4all.controllers.models.components.identifier_generator.ModelIdentifiers attribute) (nirs4all.controllers.models.components.ModelIdentifiers attribute) operator (nirs4all.pipeline.steps.ParsedStep attribute), [1] (nirs4all.pipeline.steps.parser.ParsedStep attribute), [1] operator_class (nirs4all.pipeline.ExecutionStep attribute), [1] (nirs4all.pipeline.MinimalPipelineStep attribute), [1] (nirs4all.pipeline.storage.artifacts.operator_chain.OperatorNode attribute), [1] (nirs4all.pipeline.storage.artifacts.OperatorNode attribute), [1] (nirs4all.pipeline.trace.execution_trace.ExecutionStep attribute), [1] (nirs4all.pipeline.trace.ExecutionStep attribute), [1] (nirs4all.pipeline.trace.extractor.MinimalPipelineStep attribute), [1] (nirs4all.pipeline.trace.MinimalPipelineStep attribute), [1] operator_config (nirs4all.pipeline.ExecutionStep attribute), [1] (nirs4all.pipeline.trace.execution_trace.ExecutionStep attribute), [1] (nirs4all.pipeline.trace.ExecutionStep attribute), [1] operator_name (nirs4all.pipeline.storage.artifacts.operator_chain.OperatorNode attribute), [1] (nirs4all.pipeline.storage.artifacts.OperatorNode attribute), [1] operator_type (nirs4all.pipeline.ExecutionStep attribute), [1] (nirs4all.pipeline.MinimalPipelineStep attribute), [1] (nirs4all.pipeline.trace.execution_trace.ExecutionStep attribute), [1] (nirs4all.pipeline.trace.ExecutionStep attribute), [1] (nirs4all.pipeline.trace.extractor.MinimalPipelineStep attribute), [1] (nirs4all.pipeline.trace.MinimalPipelineStep attribute), [1] OperatorChain (class in nirs4all.pipeline.storage.artifacts) (class in nirs4all.pipeline.storage.artifacts.operator_chain) OperatorController (class in nirs4all.controllers) (class in nirs4all.controllers.controller) OperatorNode (class in nirs4all.pipeline.storage.artifacts) (class in nirs4all.pipeline.storage.artifacts.operator_chain) OPERATORS (nirs4all.data.RowSelector attribute) (nirs4all.data.selection.row_selector.RowSelector attribute) (nirs4all.data.selection.RowSelector attribute) OPLS (class in nirs4all.operators.models) (class in nirs4all.operators.models.sklearn) (class in nirs4all.operators.models.sklearn.opls) opls_ (nirs4all.operators.models.OPLSDA attribute) (nirs4all.operators.models.sklearn.OPLSDA attribute) (nirs4all.operators.models.sklearn.oplsda.OPLSDA attribute) OPLSDA (class in nirs4all.operators.models) (class in nirs4all.operators.models.sklearn) (class in nirs4all.operators.models.sklearn.oplsda) optical_path (nirs4all.data.synthetic.InstrumentArchetype attribute), [1] (nirs4all.data.synthetic.instruments.InstrumentArchetype attribute), [1]

optimal_run_idx_ (nirs4all.operators.transforms.CARS attribute) (nirs4all.operators.transforms.feature_selection.CARS attribute) optimal_set_2D() (in module nirs4all.operators.transforms) (in module nirs4all.operators.transforms.presets) optuna_manager (nirs4all.controllers.models.base_model.BaseModelController attribute) (nirs4all.controllers.models.BaseModelController attribute) orchestrator (nirs4all.pipeline.PipelineRunner attribute) (nirs4all.pipeline.runner.PipelineRunner attribute) (nirs4all.PipelineRunner attribute) order (nirs4all.data.synthetic.OvertoneResult attribute) (nirs4all.data.synthetic.wavenumber.OvertoneResult attribute) ORDER (nirs4all.operators.data.DisjointSelectionCriterion attribute), [1] (nirs4all.operators.data.merge.DisjointSelectionCriterion attribute), [1] original_error (nirs4all.controllers.models.stacking.exceptions.SourcePredictionError attribute) (nirs4all.controllers.models.stacking.SourcePredictionError attribute) original_manifest (nirs4all.pipeline.bundle.BundleMetadata attribute), [1] (nirs4all.pipeline.bundle.loader.BundleMetadata attribute), [1] (nirs4all.pipeline.BundleMetadata attribute), [1] original_step (nirs4all.pipeline.steps.ParsedStep attribute), [1] (nirs4all.pipeline.steps.parser.ParsedStep attribute), [1] original_wavelengths_ (nirs4all.operators.transforms.Resampler attribute) (nirs4all.operators.transforms.resampler.Resampler attribute) OrStrategy (class in nirs4all.pipeline.config.generator) OUTLIER_EXCLUDER (nirs4all.controllers.models.stacking.branch_validator.BranchType attribute) (nirs4all.controllers.models.stacking.BranchType attribute) outlier_threshold (nirs4all.data.aggregation.AggregationConfig attribute), [1] (nirs4all.data.aggregation.aggregator.AggregationConfig attribute), [1] (nirs4all.data.synthetic.instruments.MultiScanConfig attribute), [1] (nirs4all.data.synthetic.MultiScanConfig attribute), [1] OutlierExcluderController (class in nirs4all.controllers.data) (class in nirs4all.controllers.data.outlier_excluder) OutlierExclusionResult (class in nirs4all.controllers.data.outlier_excluder) output (nirs4all.data.synthetic.config.SyntheticDatasetConfig attribute), [1] (nirs4all.data.synthetic.SyntheticDatasetConfig attribute), [1] output_as (nirs4all.operators.data.merge.MergeConfig attribute), [1] (nirs4all.operators.data.MergeConfig attribute), [1] output_chain_paths (nirs4all.pipeline.ExecutionStep attribute), [1] (nirs4all.pipeline.trace.execution_trace.ExecutionStep attribute), [1] (nirs4all.pipeline.trace.ExecutionStep attribute), [1] output_dir (nirs4all.data.PredictionAnalyzer attribute) (nirs4all.visualization.PredictionAnalyzer attribute) (nirs4all.visualization.predictions.PredictionAnalyzer attribute) output_features_shape (nirs4all.pipeline.ExecutionStep attribute) (nirs4all.pipeline.trace.execution_trace.ExecutionStep attribute) (nirs4all.pipeline.trace.ExecutionStep attribute) output_layout_shape (nirs4all.visualization.pipeline_diagram.PipelineNode attribute), [1] output_name (nirs4all.controllers.data.merge.SourceMergeConfig attribute), [1] (nirs4all.operators.data.merge.SourceMergeConfig attribute), [1] (nirs4all.operators.data.SourceMergeConfig attribute), [1] output_shape (nirs4all.pipeline.ExecutionStep attribute) (nirs4all.pipeline.trace.execution_trace.ExecutionStep attribute) (nirs4all.pipeline.trace.ExecutionStep attribute) OutputConfig (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.config) outputs (nirs4all.pipeline.execution.result.StepOutput attribute), [1] (nirs4all.pipeline.execution.result.StepResult attribute), [1] (nirs4all.pipeline.execution.StepResult attribute), [1] overall_pass (nirs4all.data.synthetic.SpectralRealismScore attribute), [1] (nirs4all.data.synthetic.validation.SpectralRealismScore attribute), [1] overlap_matrix (nirs4all.controllers.models.stacking.exceptions.IncompatibleBranchSamplesError attribute) (nirs4all.controllers.models.stacking.IncompatibleBranchSamplesError attribute) overlap_range (nirs4all.data.synthetic.instruments.SensorConfig attribute), [1] (nirs4all.data.synthetic.SensorConfig attribute), [1] overlap_ratio (nirs4all.controllers.models.stacking.DisjointSampleSetsError attribute) (nirs4all.controllers.models.stacking.exceptions.DisjointSampleSetsError attribute) OvertoneResult (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.wavenumber)

P

PAD (nirs4all.operators.data.merge.ShapeMismatchStrategy attribute), [1] (nirs4all.operators.data.merge.SourceIncompatibleStrategy attribute), [1] (nirs4all.operators.data.repetition.UnequelRepsStrategy attribute), [1] (nirs4all.operators.data.ShapeMismatchStrategy attribute), [1] (nirs4all.operators.data.SourceIncompatibleStrategy attribute), [1] (nirs4all.operators.data.UnequelRepsStrategy attribute), [1] pad_value (nirs4all.data.FeatureSource attribute) padding (nirs4all.data.FeatureSource attribute) pairwise_comparison() (nirs4all.visualization.analysis.branch.BranchAnalyzer method) (nirs4all.visualization.analysis.BranchAnalyzer method) (nirs4all.visualization.BranchAnalyzer method) params (nirs4all.data.FileConfig attribute) (nirs4all.data.schema.config.FileConfig attribute) (nirs4all.data.schema.config.PreprocessingApplied attribute) (nirs4all.data.schema.config.SharedMetadataConfig attribute) (nirs4all.data.schema.config.SharedTargetsConfig attribute) (nirs4all.data.schema.config.SourceConfig attribute) (nirs4all.data.schema.config.SourceFileConfig attribute) (nirs4all.data.schema.config.VariationConfig attribute) (nirs4all.data.schema.config.VariationFileConfig attribute) (nirs4all.data.schema.FileConfig attribute) (nirs4all.data.schema.PreprocessingApplied attribute) (nirs4all.data.schema.SharedMetadataConfig attribute) (nirs4all.data.schema.SharedTargetsConfig attribute) (nirs4all.data.schema.SourceConfig attribute) (nirs4all.data.schema.SourceFileConfig attribute) (nirs4all.data.schema.VariationConfig attribute) (nirs4all.data.schema.VariationFileConfig attribute) (nirs4all.data.synthetic.ConcentrationPrior attribute), [1] (nirs4all.data.synthetic.domains.ConcentrationPrior attribute), [1] (nirs4all.data.synthetic.generator.SyntheticNIRSGenerator attribute) (nirs4all.data.synthetic.SyntheticNIRSGenerator attribute) (nirs4all.pipeline.storage.artifacts.ArtifactRecord attribute), [1] (nirs4all.pipeline.storage.artifacts.types.ArtifactRecord attribute), [1] parent (nirs4all.core.logging.BranchContext attribute), [1] (nirs4all.core.logging.context.BranchContext attribute), [1] parent_ids (nirs4all.visualization.pipeline_diagram.PipelineNode attribute), [1] ParquetLoader (class in nirs4all.data.loaders) (class in nirs4all.data.loaders.parquet_loader) parse() (nirs4all.controllers.data.merge.MergeConfigParser class method) (nirs4all.controllers.data.MergeConfigParser class method) (nirs4all.controllers.data.source_branch.SourceBranchConfigParser class method) (nirs4all.controllers.data.SourceBranchConfigParser class method) (nirs4all.controllers.splitters.fold_file_loader.FoldFileParser method) (nirs4all.controllers.splitters.FoldFileParser method) (nirs4all.data.parsers.base.BaseParser method) (nirs4all.data.parsers.BaseParser method) (nirs4all.data.parsers.files_parser.FilesParser method) (nirs4all.data.parsers.files_parser.SourcesParser method) (nirs4all.data.parsers.files_parser.VariationsParser method) (nirs4all.data.parsers.FilesParser method) (nirs4all.data.parsers.folder_parser.FolderParser method) (nirs4all.data.parsers.FolderParser method) (nirs4all.data.parsers.legacy_parser.LegacyParser method) (nirs4all.data.parsers.LegacyParser method) (nirs4all.data.parsers.SourcesParser method) (nirs4all.data.parsers.VariationsParser method) (nirs4all.pipeline.steps.parser.StepParser method) (nirs4all.pipeline.steps.StepParser method) parse_artifact_id() (in module nirs4all.pipeline.storage.artifacts) (in module nirs4all.pipeline.storage.artifacts.utils) parse_artifact_id_v3() (in module nirs4all.pipeline.storage.artifacts) (in module nirs4all.pipeline.storage.artifacts.operator_chain) parse_config() (in module nirs4all.data.config_parser) parse_constraints() (in module nirs4all.pipeline.config.generator) parse_filename() (in module nirs4all.pipeline.storage.artifacts) (in module nirs4all.pipeline.storage.artifacts.utils) parse_loading_params() (nirs4all.data.DatasetConfigSchema class method) (nirs4all.data.schema.config.DatasetConfigSchema class method) (nirs4all.data.schema.DatasetConfigSchema class method) parse_selection() (nirs4all.data.ColumnSelector method) (nirs4all.data.selection.column_selector.ColumnSelector method) (nirs4all.data.selection.ColumnSelector method) parse_shared_metadata() (nirs4all.data.DatasetConfigSchema class method) (nirs4all.data.schema.config.DatasetConfigSchema class method) (nirs4all.data.schema.DatasetConfigSchema class method) parse_shared_targets() (nirs4all.data.DatasetConfigSchema class method) (nirs4all.data.schema.config.DatasetConfigSchema class method) (nirs4all.data.schema.DatasetConfigSchema class method) parse_sources() (nirs4all.data.DatasetConfigSchema class method) (nirs4all.data.schema.config.DatasetConfigSchema class method) (nirs4all.data.schema.DatasetConfigSchema class method) parse_variations() (nirs4all.data.DatasetConfigSchema class method) (nirs4all.data.schema.config.DatasetConfigSchema class method) (nirs4all.data.schema.DatasetConfigSchema class method) ParsedStep (class in nirs4all.pipeline.steps) (class in nirs4all.pipeline.steps.parser) parser (nirs4all.pipeline.steps.step_runner.StepRunner attribute) (nirs4all.pipeline.steps.StepRunner attribute) ParserResult (class in nirs4all.data.parsers) (class in nirs4all.data.parsers.base) partial_fit() (nirs4all.operators.Baseline method) (nirs4all.operators.models.RecursivePLS method) (nirs4all.operators.models.sklearn.recursive_pls.RecursivePLS method) (nirs4all.operators.models.sklearn.RecursivePLS method) (nirs4all.operators.MultiplicativeScatterCorrection method) (nirs4all.operators.Normalize method) (nirs4all.operators.SimpleScale method) (nirs4all.operators.transforms.Baseline method) (nirs4all.operators.transforms.MultiplicativeScatterCorrection method) (nirs4all.operators.transforms.nirs.ExtendedMultiplicativeScatterCorrection method) (nirs4all.operators.transforms.nirs.MultiplicativeScatterCorrection method) (nirs4all.operators.transforms.Normalize method) (nirs4all.operators.transforms.scalers.Normalize method) (nirs4all.operators.transforms.scalers.SimpleScale method) (nirs4all.operators.transforms.signal.Baseline method) (nirs4all.operators.transforms.SimpleScale method) particle_sim (nirs4all.data.synthetic.scattering.ScatteringEffectsSimulator attribute) (nirs4all.data.synthetic.ScatteringEffectsSimulator attribute) particle_size (nirs4all.data.synthetic.scattering.ScatteringEffectsConfig attribute), [1] (nirs4all.data.synthetic.ScatteringEffectsConfig attribute), [1] particle_size_config (nirs4all.data.synthetic.FittedParameters attribute), [1] (nirs4all.data.synthetic.fitter.FittedParameters attribute), [1] particle_size_factor (nirs4all.data.synthetic.scattering.ScatteringCoefficientConfig attribute), [1] (nirs4all.data.synthetic.ScatteringCoefficientConfig attribute), [1] particle_size_range (nirs4all.data.synthetic.NIRSPriorConfig attribute), [1] (nirs4all.data.synthetic.prior.NIRSPriorConfig attribute), [1] particle_size_um (nirs4all.data.synthetic.measurement_modes.ScatteringConfig attribute), [1] (nirs4all.data.synthetic.ScatteringConfig attribute), [1] particle_size_variation (nirs4all.data.synthetic.measurement_modes.ScatteringConfig attribute), [1] (nirs4all.data.synthetic.ScatteringConfig attribute), [1] ParticleSizeConfig (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.scattering) ParticleSizeDistribution (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.scattering) ParticleSizeSimulator (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.scattering) partition (nirs4all.controllers.models.components.PartitionPrediction attribute) (nirs4all.controllers.models.components.prediction_assembler.PartitionPrediction attribute) (nirs4all.data.FileConfig attribute) (nirs4all.data.schema.config.FileConfig attribute) (nirs4all.data.schema.config.SharedMetadataConfig attribute) (nirs4all.data.schema.config.SharedTargetsConfig attribute) (nirs4all.data.schema.config.SourceFileConfig attribute) (nirs4all.data.schema.config.VariationFileConfig attribute) (nirs4all.data.schema.FileConfig attribute) (nirs4all.data.schema.SharedMetadataConfig attribute) (nirs4all.data.schema.SharedTargetsConfig attribute) (nirs4all.data.schema.SourceFileConfig attribute) PARTITION (nirs4all.data.schema.validation.error_codes.ErrorCategory attribute) (nirs4all.data.schema.validation.ErrorCategory attribute) partition (nirs4all.data.schema.VariationFileConfig attribute) (nirs4all.operators.filters.FilteringReport attribute), [1] (nirs4all.operators.filters.report.FilteringReport attribute), [1] (nirs4all.pipeline.config.context.DataSelector attribute), [1] (nirs4all.pipeline.config.DataSelector attribute), [1] partition_a (nirs4all.controllers.models.stacking.CrossPartitionStackingError attribute) (nirs4all.controllers.models.stacking.exceptions.CrossPartitionStackingError attribute) partition_b (nirs4all.controllers.models.stacking.CrossPartitionStackingError attribute) (nirs4all.controllers.models.stacking.exceptions.CrossPartitionStackingError attribute) partition_colors (nirs4all.visualization.charts.ChartConfig attribute), [1] (nirs4all.visualization.charts.config.ChartConfig attribute), [1] partition_column (nirs4all.controllers.data.merge.DisjointBranchAnalysis attribute), [1] (nirs4all.data.partition.partition_assigner.PartitionResult attribute), [1] (nirs4all.data.partition.PartitionResult attribute), [1] (nirs4all.data.PartitionResult attribute), [1] partition_info (nirs4all.controllers.models.stacking.branch_validator.BranchInfo attribute) (nirs4all.controllers.models.stacking.BranchInfo attribute) PARTITION_NAMES (nirs4all.data.partition.partition_assigner.PartitionAssigner attribute) (nirs4all.data.partition.PartitionAssigner attribute) (nirs4all.data.PartitionAssigner attribute) PartitionAssigner (class in nirs4all.data) (class in nirs4all.data.partition) (class in nirs4all.data.partition.partition_assigner) PartitionConfig (class in nirs4all.data) (class in nirs4all.data.schema) (class in nirs4all.data.schema.config) (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.config) partitioner_routing (nirs4all.pipeline.bundle.BundleMetadata attribute), [1] (nirs4all.pipeline.bundle.loader.BundleMetadata attribute), [1] (nirs4all.pipeline.BundleMetadata attribute), [1] PartitionError, [1], [2] PartitionPrediction (class in nirs4all.controllers.models.components) (class in nirs4all.controllers.models.components.prediction_assembler) PartitionResult (class in nirs4all.data) (class in nirs4all.data.partition) (class in nirs4all.data.partition.partition_assigner) partitions (nirs4all.controllers.models.components.prediction_assembler.PredictionRecord attribute) (nirs4all.controllers.models.components.PredictionRecord attribute) (nirs4all.data.synthetic.config.SyntheticDatasetConfig attribute), [1] (nirs4all.data.synthetic.SyntheticDatasetConfig attribute), [1] PartitionScores (class in nirs4all.controllers.models.components) (class in nirs4all.controllers.models.components.score_calculator) PartitionType (class in nirs4all.data.schema) (class in nirs4all.data.schema.config) passed (nirs4all.data.synthetic.MetricResult attribute), [1] (nirs4all.data.synthetic.validation.MetricResult attribute), [1] PASTE (nirs4all.data.synthetic.MatrixType attribute) (nirs4all.data.synthetic.prior.MatrixType attribute) path (nirs4all.core.logging.BranchContext attribute), [1] (nirs4all.core.logging.context.BranchContext attribute), [1] (nirs4all.data.FileConfig attribute) (nirs4all.data.schema.config.FileConfig attribute) (nirs4all.data.schema.config.SharedMetadataConfig attribute) (nirs4all.data.schema.config.SharedTargetsConfig attribute) (nirs4all.data.schema.config.SourceFileConfig attribute) (nirs4all.data.schema.config.VariationFileConfig attribute) (nirs4all.data.schema.FileConfig attribute) (nirs4all.data.schema.SharedMetadataConfig attribute) (nirs4all.data.schema.SharedTargetsConfig attribute) (nirs4all.data.schema.SourceFileConfig attribute) (nirs4all.data.schema.VariationFileConfig attribute) (nirs4all.pipeline.config.generator.ValidationError attribute), [1] (nirs4all.pipeline.execution.ArtifactMeta attribute), [1] (nirs4all.pipeline.execution.result.ArtifactMeta attribute), [1] (nirs4all.pipeline.storage.artifacts.artifact_persistence.ArtifactMeta attribute) (nirs4all.pipeline.storage.artifacts.ArtifactRecord attribute), [1] (nirs4all.pipeline.storage.artifacts.types.ArtifactRecord attribute), [1] path_length_mm (nirs4all.data.synthetic.measurement_modes.TransflectanceConfig attribute), [1] (nirs4all.data.synthetic.measurement_modes.TransmittanceConfig attribute), [1] (nirs4all.data.synthetic.TransflectanceConfig attribute), [1] (nirs4all.data.synthetic.TransmittanceConfig attribute), [1] path_length_sensitivity (nirs4all.data.synthetic.ParticleSizeConfig attribute), [1] (nirs4all.data.synthetic.scattering.ParticleSizeConfig attribute), [1] path_length_std (nirs4all.data.synthetic.FittedParameters attribute), [1] (nirs4all.data.synthetic.fitter.FittedParameters attribute), [1] path_length_variation (nirs4all.data.synthetic.measurement_modes.TransmittanceConfig attribute), [1] (nirs4all.data.synthetic.TransmittanceConfig attribute), [1] PathOrArray (in module nirs4all.data.schema) PBS (nirs4all.data.synthetic.DetectorType attribute) (nirs4all.data.synthetic.instruments.DetectorType attribute) PBSE (nirs4all.data.synthetic.DetectorType attribute) (nirs4all.data.synthetic.instruments.DetectorType attribute) pca_explained_variance (nirs4all.data.synthetic.fitter.SpectralProperties attribute), [1] (nirs4all.data.synthetic.SpectralProperties attribute), [1] pca_n_components_95 (nirs4all.data.synthetic.fitter.SpectralProperties attribute), [1] (nirs4all.data.synthetic.SpectralProperties attribute), [1] pcas_ (nirs4all.operators.transforms.nirs.WaveletPCA attribute) (nirs4all.operators.transforms.WaveletPCA attribute) PEAK_DENSITY (nirs4all.data.synthetic.RealismMetric attribute) (nirs4all.data.synthetic.validation.RealismMetric attribute) peak_density_ratio (nirs4all.data.synthetic.SpectralRealismScore attribute), [1] (nirs4all.data.synthetic.validation.SpectralRealismScore attribute), [1] peak_positions (nirs4all.data.synthetic.fitter.SpectralProperties attribute), [1] (nirs4all.data.synthetic.SpectralProperties attribute), [1] peak_qe (nirs4all.data.synthetic.detectors.DetectorSpectralResponse attribute), [1] (nirs4all.data.synthetic.DetectorSpectralResponse attribute), [1] peak_wavelength (nirs4all.data.synthetic.detectors.DetectorSpectralResponse attribute), [1] (nirs4all.data.synthetic.DetectorSpectralResponse attribute), [1] peak_wavenumbers (nirs4all.data.synthetic.fitter.SpectralProperties attribute), [1] (nirs4all.data.synthetic.SpectralProperties attribute), [1] per_class (nirs4all.operators.models.selection.TopKByMetricSelector attribute) (nirs4all.operators.models.TopKByMetricSelector attribute) per_dataset (nirs4all.api.result.RunResult attribute), [1] (nirs4all.api.RunResult attribute), [1] (nirs4all.RunResult attribute), [1] PercentToFraction (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.signal_conversion) persist() (in module nirs4all.pipeline.storage.artifacts.artifact_persistence) persist_artifact() (nirs4all.pipeline.storage.io.SimulationSaver method) (nirs4all.pipeline.storage.SimulationSaver method) PETROCHEMICAL (nirs4all.data.synthetic.BenchmarkDomain attribute) (nirs4all.data.synthetic.benchmarks.BenchmarkDomain attribute) (nirs4all.data.synthetic.DomainCategory attribute) (nirs4all.data.synthetic.domains.DomainCategory attribute) PHARMACEUTICAL (nirs4all.data.synthetic.BenchmarkDomain attribute) (nirs4all.data.synthetic.benchmarks.BenchmarkDomain attribute) (nirs4all.data.synthetic.DomainCategory attribute) (nirs4all.data.synthetic.domains.DomainCategory attribute) Phase (class in nirs4all.core.logging) (class in nirs4all.core.logging.events) phase (nirs4all.core.logging.events.LogEvent attribute), [1] (nirs4all.core.logging.LogEvent attribute), [1] phase() (nirs4all.core.logging.context.LogContext static method) (nirs4all.core.logging.LogContext static method) phase_complete() (nirs4all.core.logging.config.Nirs4allLogger method) (nirs4all.core.logging.Nirs4allLogger method) phase_start() (nirs4all.core.logging.config.Nirs4allLogger method) (nirs4all.core.logging.Nirs4allLogger method) photometric_noise (nirs4all.data.synthetic.InstrumentArchetype attribute), [1] (nirs4all.data.synthetic.instruments.InstrumentArchetype attribute), [1] photometric_range (nirs4all.data.synthetic.InstrumentArchetype attribute), [1] (nirs4all.data.synthetic.instruments.InstrumentArchetype attribute), [1] pipeline (nirs4all.api.Session attribute) (nirs4all.api.Session property) (nirs4all.api.session.Session attribute) (nirs4all.api.session.Session property) (nirs4all.Session attribute) (nirs4all.Session property) pipeline_config (nirs4all.pipeline.bundle.BundleLoader attribute) (nirs4all.pipeline.bundle.loader.BundleLoader attribute) (nirs4all.pipeline.BundleLoader attribute) pipeline_exists() (nirs4all.pipeline.storage.manifest_manager.ManifestManager method) (nirs4all.pipeline.storage.ManifestManager method) pipeline_id (nirs4all.pipeline.storage.artifacts.artifact_registry.ArtifactRegistry attribute) (nirs4all.pipeline.storage.artifacts.ArtifactRecord attribute), [1] (nirs4all.pipeline.storage.artifacts.ArtifactRegistry attribute) (nirs4all.pipeline.storage.artifacts.ExecutionPath attribute), [1] (nirs4all.pipeline.storage.artifacts.operator_chain.OperatorChain attribute), [1] (nirs4all.pipeline.storage.artifacts.OperatorChain attribute), [1] (nirs4all.pipeline.storage.artifacts.types.ArtifactRecord attribute), [1] (nirs4all.pipeline.storage.artifacts.utils.ExecutionPath attribute), [1] (nirs4all.pipeline.trace.recorder.TraceRecorder attribute) (nirs4all.pipeline.trace.TraceRecorder attribute) (nirs4all.pipeline.TraceRecorder attribute) pipeline_level() (nirs4all.core.logging.MultiLevelProgress method) (nirs4all.core.logging.progress.MultiLevelProgress method) pipeline_steps (nirs4all.visualization.branch_diagram.PipelineDiagram attribute) (nirs4all.visualization.pipeline_diagram.PipelineDiagram attribute) (nirs4all.visualization.PipelineDiagram attribute) pipeline_type (nirs4all.analysis.results.TransferResult attribute), [1] (nirs4all.analysis.TransferResult attribute), [1] pipeline_uid (nirs4all.pipeline.bundle.BundleMetadata attribute), [1] (nirs4all.pipeline.bundle.loader.BundleMetadata attribute), [1] (nirs4all.pipeline.BundleMetadata attribute), [1] (nirs4all.pipeline.config.context.RuntimeContext attribute), [1] (nirs4all.pipeline.config.RuntimeContext attribute), [1] (nirs4all.pipeline.ExecutionTrace attribute), [1] (nirs4all.pipeline.Explainer attribute) (nirs4all.pipeline.explainer.Explainer attribute) (nirs4all.pipeline.MinimalPipeline attribute), [1] (nirs4all.pipeline.Predictor attribute) (nirs4all.pipeline.predictor.Predictor attribute) (nirs4all.pipeline.ResolvedPrediction attribute), [1] (nirs4all.pipeline.resolver.ResolvedPrediction attribute), [1] (nirs4all.pipeline.trace.execution_trace.ExecutionTrace attribute), [1] (nirs4all.pipeline.trace.ExecutionTrace attribute), [1] (nirs4all.pipeline.trace.extractor.MinimalPipeline attribute), [1] (nirs4all.pipeline.trace.MinimalPipeline attribute), [1] PipelineConfigs (class in nirs4all) (class in nirs4all.pipeline) (class in nirs4all.pipeline.config) (class in nirs4all.pipeline.config.pipeline_config) PipelineDiagram (class in nirs4all.visualization) (class in nirs4all.visualization.branch_diagram) (class in nirs4all.visualization.pipeline_diagram) PipelineExecutor (class in nirs4all.pipeline.execution) (class in nirs4all.pipeline.execution.executor) PipelineLibrary (class in nirs4all.pipeline) (class in nirs4all.pipeline.storage) (class in nirs4all.pipeline.storage.library) PipelineNode (class in nirs4all.visualization.pipeline_diagram) PipelineOrchestrator (class in nirs4all.pipeline.execution) (class in nirs4all.pipeline.execution.orchestrator) PipelineRunner (class in nirs4all) (class in nirs4all.pipeline) (class in nirs4all.pipeline.runner) PipelineState (class in nirs4all.pipeline.config) (class in nirs4all.pipeline.config.context) PipelineWriter (class in nirs4all.pipeline) (class in nirs4all.pipeline.storage) (class in nirs4all.pipeline.storage.io_writer) plot_all() (nirs4all.visualization.analysis.PreprocPCAEvaluator method) (nirs4all.visualization.analysis.transfer.PreprocPCAEvaluator method) plot_all_datasets_pca() (nirs4all.visualization.analysis.PreprocPCAEvaluator method) (nirs4all.visualization.analysis.transfer.PreprocPCAEvaluator method) plot_beeswarm() (nirs4all.visualization.analysis.shap.ShapAnalyzer method) (nirs4all.visualization.analysis.ShapAnalyzer method) plot_beeswarm_binned() (nirs4all.visualization.analysis.shap.ShapAnalyzer method) (nirs4all.visualization.analysis.ShapAnalyzer method) plot_branch_boxplot() (nirs4all.data.PredictionAnalyzer method) (nirs4all.visualization.PredictionAnalyzer method) (nirs4all.visualization.predictions.PredictionAnalyzer method) plot_branch_comparison() (nirs4all.data.PredictionAnalyzer method) (nirs4all.visualization.PredictionAnalyzer method) (nirs4all.visualization.predictions.PredictionAnalyzer method) plot_branch_diagram() (in module nirs4all.visualization) (in module nirs4all.visualization.branch_diagram) (in module nirs4all.visualization.pipeline_diagram) (nirs4all.data.PredictionAnalyzer method) (nirs4all.visualization.PredictionAnalyzer method) (nirs4all.visualization.predictions.PredictionAnalyzer method) plot_branch_heatmap() (nirs4all.data.PredictionAnalyzer method) (nirs4all.visualization.PredictionAnalyzer method) (nirs4all.visualization.predictions.PredictionAnalyzer method) plot_candlestick() (nirs4all.data.PredictionAnalyzer method) (nirs4all.visualization.PredictionAnalyzer method) (nirs4all.visualization.predictions.PredictionAnalyzer method) plot_confusion_matrix() (nirs4all.data.PredictionAnalyzer method) (nirs4all.visualization.PredictionAnalyzer method) (nirs4all.visualization.predictions.PredictionAnalyzer method) plot_cross_dataset_distances() (nirs4all.visualization.analysis.PreprocPCAEvaluator method) (nirs4all.visualization.analysis.transfer.PreprocPCAEvaluator method) plot_cross_dataset_heatmap() (nirs4all.visualization.analysis.PreprocPCAEvaluator method) (nirs4all.visualization.analysis.transfer.PreprocPCAEvaluator method) plot_dependence() (nirs4all.visualization.analysis.shap.ShapAnalyzer method) (nirs4all.visualization.analysis.ShapAnalyzer method) plot_distance_matrices() (nirs4all.visualization.analysis.PreprocPCAEvaluator method) (nirs4all.visualization.analysis.transfer.PreprocPCAEvaluator method) plot_distance_reduction_ranking() (nirs4all.visualization.analysis.PreprocPCAEvaluator method) (nirs4all.visualization.analysis.transfer.PreprocPCAEvaluator method) plot_force() (nirs4all.visualization.analysis.shap.ShapAnalyzer method) (nirs4all.visualization.analysis.ShapAnalyzer method) plot_heatmap() (nirs4all.data.PredictionAnalyzer method) (nirs4all.visualization.PredictionAnalyzer method) (nirs4all.visualization.predictions.PredictionAnalyzer method) plot_histogram() (nirs4all.data.PredictionAnalyzer method) (nirs4all.visualization.PredictionAnalyzer method) (nirs4all.visualization.predictions.PredictionAnalyzer method) plot_improvement_heatmap() (nirs4all.analysis.results.TransferSelectionResults method) (nirs4all.analysis.TransferSelectionResults method) plot_metrics_comparison() (nirs4all.analysis.results.TransferSelectionResults method) (nirs4all.analysis.TransferSelectionResults method) plot_nested_branches() (nirs4all.data.PredictionAnalyzer method) (nirs4all.visualization.PredictionAnalyzer method) (nirs4all.visualization.predictions.PredictionAnalyzer method) plot_pair() (nirs4all.visualization.analysis.PreprocPCAEvaluator method) (nirs4all.visualization.analysis.transfer.PreprocPCAEvaluator method) plot_pipeline_diagram() (in module nirs4all.visualization) (in module nirs4all.visualization.branch_diagram) (in module nirs4all.visualization.pipeline_diagram) plot_preservation_summary() (nirs4all.visualization.analysis.PreprocPCAEvaluator method) (nirs4all.visualization.analysis.transfer.PreprocPCAEvaluator method) plot_quality_metric_convergence() (nirs4all.visualization.analysis.PreprocPCAEvaluator method) (nirs4all.visualization.analysis.transfer.PreprocPCAEvaluator method) plot_ranking() (nirs4all.analysis.results.TransferSelectionResults method) (nirs4all.analysis.TransferSelectionResults method) plot_spectral_importance() (nirs4all.visualization.analysis.shap.ShapAnalyzer method) (nirs4all.visualization.analysis.ShapAnalyzer method) plot_summary() (nirs4all.visualization.analysis.shap.ShapAnalyzer method) (nirs4all.visualization.analysis.ShapAnalyzer method) plot_top_k() (nirs4all.data.PredictionAnalyzer method) (nirs4all.visualization.PredictionAnalyzer method) (nirs4all.visualization.predictions.PredictionAnalyzer method) plot_waterfall() (nirs4all.visualization.analysis.shap.ShapAnalyzer method) (nirs4all.visualization.analysis.ShapAnalyzer method) plot_waterfall_binned() (nirs4all.visualization.analysis.shap.ShapAnalyzer method) (nirs4all.visualization.analysis.ShapAnalyzer method) plots_visible (nirs4all.pipeline.execution.orchestrator.PipelineOrchestrator attribute) (nirs4all.pipeline.execution.PipelineOrchestrator attribute) (nirs4all.pipeline.PipelineRunner attribute) (nirs4all.pipeline.runner.PipelineRunner attribute) (nirs4all.PipelineRunner attribute) pls_ (nirs4all.operators.models.FCKPLS attribute) (nirs4all.operators.models.sklearn.FCKPLS attribute) (nirs4all.operators.models.sklearn.fckpls.FCKPLS attribute) PLSDA (class in nirs4all.operators.models) (class in nirs4all.operators.models.sklearn) (class in nirs4all.operators.models.sklearn.plsda) plsda_ (nirs4all.operators.models.OPLSDA attribute) (nirs4all.operators.models.sklearn.OPLSDA attribute) (nirs4all.operators.models.sklearn.oplsda.OPLSDA attribute) POLYMER (nirs4all.data.synthetic.DomainCategory attribute) (nirs4all.data.synthetic.domains.DomainCategory attribute) POLYNOMIAL (nirs4all.data.synthetic.scattering.ScatteringModel attribute) (nirs4all.data.synthetic.ScatteringModel attribute) polynomial_degree (nirs4all.data.synthetic.builder.BuilderState attribute) (nirs4all.data.synthetic.config.NonLinearConfig attribute), [1] (nirs4all.data.synthetic.targets.NonLinearTargetConfig attribute), [1] polynomial_order (nirs4all.data.synthetic.EMSCConfig attribute), [1] (nirs4all.data.synthetic.scattering.EMSCConfig attribute), [1] PolynomialBaselineDrift (class in nirs4all.operators.transforms) PolynomialFeaturizer (class in nirs4all.operators.models) (class in nirs4all.operators.models.sklearn) (class in nirs4all.operators.models.sklearn.oklmpls) pop_chain() (nirs4all.pipeline.trace.recorder.TraceRecorder method) (nirs4all.pipeline.trace.TraceRecorder method) (nirs4all.pipeline.TraceRecorder method) POWDER (nirs4all.data.synthetic.MatrixType attribute) (nirs4all.data.synthetic.prior.MatrixType attribute)

pp_data (nirs4all.pipeline.PipelineRunner attribute) (nirs4all.pipeline.runner.PipelineRunner attribute) (nirs4all.PipelineRunner attribute) pp_names (nirs4all.operators.data.repetition.RepetitionConfig attribute), [1] (nirs4all.operators.data.RepetitionConfig attribute), [1] pred_long_string() (nirs4all.data.Predictions class method) (nirs4all.data.predictions.Predictions class method) pred_short_string() (nirs4all.data.Predictions class method) (nirs4all.data.predictions.Predictions class method) PREDICT (nirs4all.core.logging.events.Phase attribute) (nirs4all.core.logging.Phase attribute) predict (nirs4all.data.PartitionConfig attribute) (nirs4all.data.schema.config.PartitionConfig attribute) PREDICT (nirs4all.data.schema.config.PartitionType attribute) predict (nirs4all.data.schema.PartitionConfig attribute) PREDICT (nirs4all.data.schema.PartitionType attribute) (nirs4all.pipeline.trace.execution_trace.StepExecutionMode attribute), [1] (nirs4all.pipeline.trace.StepExecutionMode attribute), [1] predict() (in module nirs4all) (in module nirs4all.api) (in module nirs4all.api.predict) (nirs4all.api.Session method) (nirs4all.api.session.Session method) (nirs4all.controllers.models.jax_wrapper.JaxModelWrapper method) (nirs4all.operators.models.DiPLS method) (nirs4all.operators.models.FCKPLS method) (nirs4all.operators.models.IKPLS method) (nirs4all.operators.models.IntervalPLS method) (nirs4all.operators.models.KernelPLS method) (nirs4all.operators.models.KOPLS method) (nirs4all.operators.models.LWPLS method) (nirs4all.operators.models.MBPLS method) (nirs4all.operators.models.OKLMPLS method) (nirs4all.operators.models.OPLS method) (nirs4all.operators.models.OPLSDA method) (nirs4all.operators.models.PLSDA method) (nirs4all.operators.models.RecursivePLS method) (nirs4all.operators.models.RobustPLS method) (nirs4all.operators.models.SIMPLS method) (nirs4all.operators.models.sklearn.DiPLS method) (nirs4all.operators.models.sklearn.dipls.DiPLS method) (nirs4all.operators.models.sklearn.FCKPLS method) (nirs4all.operators.models.sklearn.fckpls.FCKPLS method) (nirs4all.operators.models.sklearn.IKPLS method) (nirs4all.operators.models.sklearn.ikpls.IKPLS method) (nirs4all.operators.models.sklearn.IntervalPLS method) (nirs4all.operators.models.sklearn.ipls.IntervalPLS method) (nirs4all.operators.models.sklearn.KernelPLS method) (nirs4all.operators.models.sklearn.KOPLS method) (nirs4all.operators.models.sklearn.kopls.KOPLS method) (nirs4all.operators.models.sklearn.LWPLS method) (nirs4all.operators.models.sklearn.lwpls.LWPLS method) (nirs4all.operators.models.sklearn.MBPLS method) (nirs4all.operators.models.sklearn.mbpls.MBPLS method) (nirs4all.operators.models.sklearn.nlpls.KernelPLS method) (nirs4all.operators.models.sklearn.OKLMPLS method) (nirs4all.operators.models.sklearn.oklmpls.OKLMPLS method) (nirs4all.operators.models.sklearn.OPLS method) (nirs4all.operators.models.sklearn.opls.OPLS method) (nirs4all.operators.models.sklearn.OPLSDA method) (nirs4all.operators.models.sklearn.oplsda.OPLSDA method) (nirs4all.operators.models.sklearn.PLSDA method) (nirs4all.operators.models.sklearn.plsda.PLSDA method) (nirs4all.operators.models.sklearn.recursive_pls.RecursivePLS method) (nirs4all.operators.models.sklearn.RecursivePLS method) (nirs4all.operators.models.sklearn.robust_pls.RobustPLS method) (nirs4all.operators.models.sklearn.RobustPLS method) (nirs4all.operators.models.sklearn.SIMPLS method) (nirs4all.operators.models.sklearn.simpls.SIMPLS method) (nirs4all.operators.models.sklearn.SparsePLS method) (nirs4all.operators.models.sklearn.sparsepls.SparsePLS method) (nirs4all.operators.models.SparsePLS method) (nirs4all.pipeline.bundle.BundleLoader method) (nirs4all.pipeline.bundle.loader.BundleLoader method) (nirs4all.pipeline.BundleLoader method) (nirs4all.pipeline.minimal_predictor.MinimalPredictor method) (nirs4all.pipeline.MinimalPredictor method) (nirs4all.pipeline.PipelineRunner method) (nirs4all.pipeline.Predictor method) (nirs4all.pipeline.predictor.Predictor method) (nirs4all.pipeline.runner.PipelineRunner method) (nirs4all.PipelineRunner method) (nirs4all.Session method) (nirs4all.sklearn.classifier.NIRSPipelineClassifier method) (nirs4all.sklearn.NIRSPipeline method), [1] (nirs4all.sklearn.NIRSPipelineClassifier method) (nirs4all.sklearn.pipeline.NIRSPipeline method), [1] predict_all_components() (nirs4all.operators.models.LWPLS method) (nirs4all.operators.models.sklearn.LWPLS method) (nirs4all.operators.models.sklearn.lwpls.LWPLS method) predict_data (nirs4all.data.partition.partition_assigner.PartitionResult attribute), [1] (nirs4all.data.partition.PartitionResult attribute), [1] (nirs4all.data.PartitionResult attribute), [1] predict_dynamic() (nirs4all.operators.models.OKLMPLS method) (nirs4all.operators.models.sklearn.OKLMPLS method) (nirs4all.operators.models.sklearn.oklmpls.OKLMPLS method) predict_file (nirs4all.data.PartitionConfig attribute) (nirs4all.data.schema.config.PartitionConfig attribute) (nirs4all.data.schema.PartitionConfig attribute) predict_indices (nirs4all.data.partition.partition_assigner.PartitionResult attribute), [1] (nirs4all.data.partition.PartitionResult attribute), [1] (nirs4all.data.PartitionResult attribute), [1] predict_proba() (nirs4all.operators.models.OPLSDA method) (nirs4all.operators.models.PLSDA method) (nirs4all.operators.models.sklearn.OPLSDA method) (nirs4all.operators.models.sklearn.oplsda.OPLSDA method) (nirs4all.operators.models.sklearn.PLSDA method) (nirs4all.operators.models.sklearn.plsda.PLSDA method) (nirs4all.sklearn.classifier.NIRSPipelineClassifier method) (nirs4all.sklearn.NIRSPipelineClassifier method) predict_values (nirs4all.data.PartitionConfig attribute) (nirs4all.data.schema.config.PartitionConfig attribute) (nirs4all.data.schema.PartitionConfig attribute) predict_with_fold_ensemble() (nirs4all.pipeline.minimal_predictor.MinimalPredictor method) (nirs4all.pipeline.MinimalPredictor method) predict_with_metadata() (nirs4all.pipeline.bundle.BundleLoader method) (nirs4all.pipeline.bundle.loader.BundleLoader method) (nirs4all.pipeline.BundleLoader method) PREDICTION (nirs4all.pipeline.resolver.SourceType attribute), [1] (nirs4all.pipeline.SourceType attribute), [1] prediction_assembler (nirs4all.controllers.models.base_model.BaseModelController attribute) (nirs4all.controllers.models.BaseModelController attribute) prediction_branch (nirs4all.controllers.models.stacking.BranchMismatchError attribute) (nirs4all.controllers.models.stacking.exceptions.BranchMismatchError attribute) prediction_branches (nirs4all.operators.data.merge.MergeConfig attribute), [1] (nirs4all.operators.data.MergeConfig attribute), [1] prediction_configs (nirs4all.operators.data.merge.MergeConfig attribute), [1] (nirs4all.operators.data.MergeConfig attribute), [1] prediction_store (nirs4all.controllers.data.merge.ModelSelector attribute) (nirs4all.controllers.models.base_model.BaseModelController attribute) (nirs4all.controllers.models.BaseModelController attribute) (nirs4all.controllers.models.FoldAlignmentValidator attribute) (nirs4all.controllers.models.stacking.crossbranch.CrossBranchValidator attribute) (nirs4all.controllers.models.stacking.CrossBranchValidator attribute) (nirs4all.controllers.models.stacking.FoldAlignmentValidator attribute) (nirs4all.controllers.models.stacking.multilevel.MultiLevelValidator attribute) (nirs4all.controllers.models.stacking.MultiLevelValidator attribute) (nirs4all.controllers.models.stacking.reconstructor.FoldAlignmentValidator attribute) (nirs4all.controllers.models.stacking.reconstructor.TrainingSetReconstructor attribute) (nirs4all.controllers.models.stacking.TrainingSetReconstructor attribute) (nirs4all.controllers.models.TrainingSetReconstructor attribute) (nirs4all.controllers.shared.model_selector.ModelSelector attribute) (nirs4all.controllers.shared.ModelSelector attribute) prediction_transformer (nirs4all.controllers.models.base_model.BaseModelController attribute) (nirs4all.controllers.models.BaseModelController attribute) PredictionAggregator (class in nirs4all.controllers.data.merge) (class in nirs4all.controllers.shared) (class in nirs4all.controllers.shared.prediction_aggregator) PredictionAnalyzer (class in nirs4all.data) (class in nirs4all.visualization) (class in nirs4all.visualization.predictions) PredictionCache (class in nirs4all.visualization.prediction_cache) PredictionDataAssembler (class in nirs4all.controllers.models.components) (class in nirs4all.controllers.models.components.prediction_assembler) PredictionRecord (class in nirs4all.controllers.models.components) (class in nirs4all.controllers.models.components.prediction_assembler) PredictionResolver (class in nirs4all.pipeline) (class in nirs4all.pipeline.resolver) (in module nirs4all.pipeline.storage) (in module nirs4all.pipeline.storage.io_resolver) PredictionResult (class in nirs4all.data) (class in nirs4all.data.predictions) PredictionResultsList (class in nirs4all.data) (class in nirs4all.data.predictions) Predictions (class in nirs4all.data) (class in nirs4all.data.predictions) predictions (nirs4all.api.result.RunResult attribute), [1] (nirs4all.api.RunResult attribute), [1] PREDICTIONS (nirs4all.core.logging.events.EventType attribute) (nirs4all.core.logging.EventType attribute) predictions (nirs4all.data.PredictionAnalyzer attribute) PREDICTIONS (nirs4all.operators.data.merge.MergeMode attribute), [1] (nirs4all.operators.data.MergeMode attribute), [1] predictions (nirs4all.operators.models.ModelCandidate attribute), [1] (nirs4all.operators.models.selection.ModelCandidate attribute), [1] (nirs4all.pipeline.execution.result.StepResult attribute), [1] (nirs4all.pipeline.execution.StepResult attribute), [1] (nirs4all.RunResult attribute), [1] (nirs4all.visualization.analysis.branch.BranchAnalyzer attribute) (nirs4all.visualization.analysis.BranchAnalyzer attribute) (nirs4all.visualization.branch_diagram.PipelineDiagram attribute) (nirs4all.visualization.BranchAnalyzer attribute) (nirs4all.visualization.chart_utils.predictions_adapter.PredictionsAdapter attribute) (nirs4all.visualization.chart_utils.PredictionsAdapter attribute) (nirs4all.visualization.charts.base.BaseChart attribute) (nirs4all.visualization.charts.BaseChart attribute) (nirs4all.visualization.pipeline_diagram.PipelineDiagram attribute) (nirs4all.visualization.PipelineDiagram attribute) (nirs4all.visualization.PredictionAnalyzer attribute) (nirs4all.visualization.predictions.PredictionAnalyzer attribute) PredictionsAdapter (class in nirs4all.visualization.chart_utils) (class in nirs4all.visualization.chart_utils.predictions_adapter) PredictionTransformer (class in nirs4all.controllers.models.components) (class in nirs4all.controllers.models.components.prediction_transformer) Predictor (class in nirs4all.pipeline) (class in nirs4all.pipeline.predictor) predictor (nirs4all.pipeline.PipelineRunner attribute) (nirs4all.pipeline.runner.PipelineRunner attribute) (nirs4all.PipelineRunner attribute) PredictResult (class in nirs4all) (class in nirs4all.api) (class in nirs4all.api.result) preferred_classes (nirs4all.operators.models.DiversitySelector attribute) (nirs4all.operators.models.selection.DiversitySelector attribute) preload_artifacts() (nirs4all.pipeline.storage.artifacts.artifact_loader.ArtifactLoader method) (nirs4all.pipeline.storage.artifacts.ArtifactLoader method) prepare() (nirs4all.controllers.base.BaseController method) (nirs4all.controllers.BaseController method) (nirs4all.controllers.models.tensorflow.config.TensorFlowCompilationConfig static method) (nirs4all.controllers.models.tensorflow.config.TensorFlowFitConfig static method) (nirs4all.controllers.models.tensorflow.TensorFlowCompilationConfig static method) (nirs4all.controllers.models.tensorflow.TensorFlowFitConfig static method) prepare_and_call() (nirs4all.controllers.models.factory.ModelFactory static method) prepare_data() (nirs4all.controllers.models.tensorflow.data_prep.TensorFlowDataPreparation static method) (nirs4all.controllers.models.tensorflow.TensorFlowDataPreparation static method) prepare_features() (nirs4all.controllers.models.tensorflow.data_prep.TensorFlowDataPreparation static method) (nirs4all.controllers.models.tensorflow.TensorFlowDataPreparation static method) prepare_targets() (nirs4all.controllers.models.tensorflow.data_prep.TensorFlowDataPreparation static method) (nirs4all.controllers.models.tensorflow.TensorFlowDataPreparation static method) PREPROCESSED (nirs4all.data.signal_type.SignalType attribute) (nirs4all.data.SignalType attribute) PREPROCESSING (nirs4all.controllers.models.stacking.branch_validator.BranchType attribute) (nirs4all.controllers.models.stacking.BranchType attribute) preprocessing_applied (nirs4all.data.schema.config.VariationConfig attribute) (nirs4all.data.schema.VariationConfig attribute) preprocessing_chain (nirs4all.pipeline.bundle.BundleMetadata attribute), [1] (nirs4all.pipeline.bundle.loader.BundleMetadata attribute), [1] (nirs4all.pipeline.BundleMetadata attribute), [1] (nirs4all.pipeline.ExecutionTrace attribute), [1] (nirs4all.pipeline.ExtractedPipeline attribute), [1] (nirs4all.pipeline.MinimalPipeline attribute), [1] (nirs4all.pipeline.retrainer.ExtractedPipeline attribute), [1] (nirs4all.pipeline.trace.execution_trace.ExecutionTrace attribute), [1] (nirs4all.pipeline.trace.ExecutionTrace attribute), [1] (nirs4all.pipeline.trace.extractor.MinimalPipeline attribute), [1] (nirs4all.pipeline.trace.MinimalPipeline attribute), [1] (nirs4all.sklearn.NIRSPipeline attribute) (nirs4all.sklearn.NIRSPipeline property) (nirs4all.sklearn.pipeline.NIRSPipeline attribute) (nirs4all.sklearn.pipeline.NIRSPipeline property) preprocessing_list() (in module nirs4all.operators.transforms) (in module nirs4all.operators.transforms.presets) preprocessing_steps (nirs4all.api.PredictResult attribute), [1] (nirs4all.api.result.PredictResult attribute), [1] (nirs4all.PredictResult attribute), [1] preprocessing_str (nirs4all.data.features.Features property) PreprocessingApplied (class in nirs4all.data.schema) (class in nirs4all.data.schema.config) PreprocPCAEvaluator (class in nirs4all.visualization.analysis) (class in nirs4all.visualization.analysis.transfer) PRESERVE (nirs4all.data.schema.CategoricalMode attribute) (nirs4all.data.schema.config.CategoricalMode attribute) preserve_order (nirs4all.operators.data.repetition.RepetitionConfig attribute), [1] (nirs4all.operators.data.RepetitionConfig attribute), [1] (nirs4all.pipeline.trace.extractor.TraceBasedExtractor attribute) (nirs4all.pipeline.trace.TraceBasedExtractor attribute) (nirs4all.pipeline.TraceBasedExtractor attribute) preserve_source_info (nirs4all.controllers.data.merge.SourceMergeConfig attribute), [1] (nirs4all.operators.data.merge.SourceMergeConfig attribute), [1] (nirs4all.operators.data.SourceMergeConfig attribute), [1] primary_artifact_id (nirs4all.pipeline.StepArtifacts attribute), [1] (nirs4all.pipeline.trace.execution_trace.StepArtifacts attribute), [1] (nirs4all.pipeline.trace.StepArtifacts attribute), [1] primary_artifacts (nirs4all.pipeline.StepArtifacts attribute), [1] (nirs4all.pipeline.trace.execution_trace.StepArtifacts attribute), [1] (nirs4all.pipeline.trace.StepArtifacts attribute), [1] print_backend_status() (in module nirs4all.utils) (in module nirs4all.utils.backend) print_expansion_tree() (in module nirs4all.pipeline.config.generator) print_report() (nirs4all.operators.filters.FilteringReport method) (nirs4all.operators.filters.report.FilteringReport method) print_summary() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.SpectroDataset method) priority (nirs4all.controllers.AugmentationChartController attribute) (nirs4all.controllers.AutoTransferPreprocessingController attribute) (nirs4all.controllers.BranchController attribute), [1] (nirs4all.controllers.charts.augmentation.AugmentationChartController attribute) (nirs4all.controllers.charts.exclusion.ExclusionChartController attribute) (nirs4all.controllers.charts.ExclusionChartController attribute) (nirs4all.controllers.charts.folds.FoldChartController attribute) (nirs4all.controllers.charts.spectra.SpectraChartController attribute) (nirs4all.controllers.charts.spectral_distribution.SpectralDistributionController attribute) (nirs4all.controllers.charts.targets.YChartController attribute) (nirs4all.controllers.ConcatAugmentationController attribute) (nirs4all.controllers.controller.OperatorController attribute) (nirs4all.controllers.CrossValidatorController attribute) (nirs4all.controllers.data.auto_transfer_preproc.AutoTransferPreprocessingController attribute) (nirs4all.controllers.data.AutoTransferPreprocessingController attribute) (nirs4all.controllers.data.branch.BranchController attribute), [1] (nirs4all.controllers.data.concat_transform.ConcatAugmentationController attribute) (nirs4all.controllers.data.ConcatAugmentationController attribute) (nirs4all.controllers.data.feature_augmentation.FeatureAugmentationController attribute) (nirs4all.controllers.data.feature_selection.FeatureSelectionController attribute) (nirs4all.controllers.data.FeatureAugmentationController attribute) (nirs4all.controllers.data.FeatureSelectionController attribute) (nirs4all.controllers.data.merge.MergeController attribute), [1] (nirs4all.controllers.data.MergeController attribute), [1] (nirs4all.controllers.data.metadata_partitioner.MetadataPartitionerController attribute), [1] (nirs4all.controllers.data.MetadataPartitionerController attribute), [1] (nirs4all.controllers.data.outlier_excluder.OutlierExcluderController attribute), [1] (nirs4all.controllers.data.OutlierExcluderController attribute), [1] (nirs4all.controllers.data.repetition.RepToPPController attribute), [1] (nirs4all.controllers.data.repetition.RepToSourcesController attribute), [1] (nirs4all.controllers.data.RepToPPController attribute), [1] (nirs4all.controllers.data.RepToSourcesController attribute), [1] (nirs4all.controllers.data.resampler.ResamplerController attribute) (nirs4all.controllers.data.ResamplerController attribute) (nirs4all.controllers.data.sample_augmentation.SampleAugmentationController attribute) (nirs4all.controllers.data.sample_filter.SampleFilterController attribute) (nirs4all.controllers.data.sample_partitioner.SamplePartitionerController attribute), [1] (nirs4all.controllers.data.SampleAugmentationController attribute) (nirs4all.controllers.data.SampleFilterController attribute) (nirs4all.controllers.data.SamplePartitionerController attribute), [1] (nirs4all.controllers.data.source_branch.SourceBranchController attribute), [1] (nirs4all.controllers.data.SourceBranchController attribute), [1] (nirs4all.controllers.DummyController attribute) (nirs4all.controllers.FeatureAugmentationController attribute) (nirs4all.controllers.flow.dummy.DummyController attribute) (nirs4all.controllers.flow.DummyController attribute) (nirs4all.controllers.FoldChartController attribute) (nirs4all.controllers.JaxModelController attribute) (nirs4all.controllers.models.autogluon_model.AutoGluonModelController attribute), [1] (nirs4all.controllers.models.AutoGluonModelController attribute), [1] (nirs4all.controllers.models.base_model.BaseModelController attribute) (nirs4all.controllers.models.BaseModelController attribute) (nirs4all.controllers.models.jax_model.JaxModelController attribute) (nirs4all.controllers.models.JaxModelController attribute) (nirs4all.controllers.models.meta_model.MetaModelController attribute), [1] (nirs4all.controllers.models.MetaModelController attribute), [1] (nirs4all.controllers.models.PyTorchModelController attribute) (nirs4all.controllers.models.sklearn_model.SklearnModelController attribute), [1] (nirs4all.controllers.models.SklearnModelController attribute), [1] (nirs4all.controllers.models.tensorflow_model.TensorFlowModelController attribute), [1] (nirs4all.controllers.models.TensorFlowModelController attribute), [1] (nirs4all.controllers.models.torch_model.PyTorchModelController attribute) (nirs4all.controllers.OperatorController attribute) (nirs4all.controllers.PyTorchModelController attribute) (nirs4all.controllers.ResamplerController attribute) (nirs4all.controllers.SampleAugmentationController attribute) (nirs4all.controllers.SampleFilterController attribute) (nirs4all.controllers.SklearnModelController attribute), [1] (nirs4all.controllers.SpectraChartController attribute) (nirs4all.controllers.SpectralDistributionController attribute) (nirs4all.controllers.splitters.fold_file_loader.FoldFileLoaderController attribute) (nirs4all.controllers.splitters.FoldFileLoaderController attribute) (nirs4all.controllers.splitters.split.CrossValidatorController attribute) (nirs4all.controllers.TensorFlowModelController attribute), [1] (nirs4all.controllers.TransformerMixinController attribute) (nirs4all.controllers.transforms.transformer.TransformerMixinController attribute) (nirs4all.controllers.transforms.y_transformer.YTransformerMixinController attribute) (nirs4all.controllers.YChartController attribute) (nirs4all.controllers.YTransformerMixinController attribute) (nirs4all.data.loaders.archive_loader.EnhancedZipLoader attribute) (nirs4all.data.loaders.archive_loader.TarLoader attribute) (nirs4all.data.loaders.base.FileLoader attribute) (nirs4all.data.loaders.csv_loader_new.CSVLoader attribute) (nirs4all.data.loaders.CSVLoader attribute) (nirs4all.data.loaders.EnhancedZipLoader attribute) (nirs4all.data.loaders.excel_loader.ExcelLoader attribute) (nirs4all.data.loaders.ExcelLoader attribute) (nirs4all.data.loaders.FileLoader attribute) (nirs4all.data.loaders.matlab_loader.MatlabLoader attribute) (nirs4all.data.loaders.MatlabLoader attribute) (nirs4all.data.loaders.numpy_loader.NumpyLoader attribute) (nirs4all.data.loaders.NumpyLoader attribute) (nirs4all.data.loaders.parquet_loader.ParquetLoader attribute) (nirs4all.data.loaders.ParquetLoader attribute) (nirs4all.data.loaders.TarLoader attribute) (nirs4all.pipeline.config.generator.CartesianStrategy attribute), [1] (nirs4all.pipeline.config.generator.ChainStrategy attribute), [1] (nirs4all.pipeline.config.generator.ExpansionStrategy attribute), [1] (nirs4all.pipeline.config.generator.GridStrategy attribute), [1] (nirs4all.pipeline.config.generator.LogRangeStrategy attribute), [1] (nirs4all.pipeline.config.generator.OrStrategy attribute), [1] (nirs4all.pipeline.config.generator.RangeStrategy attribute), [1] (nirs4all.pipeline.config.generator.SampleStrategy attribute), [1] (nirs4all.pipeline.config.generator.ZipStrategy attribute), [1] PriorSampler (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.prior) proba (nirs4all.operators.data.BranchPredictionConfig attribute), [1] (nirs4all.operators.data.merge.BranchPredictionConfig attribute), [1] PROBA_MEAN (nirs4all.operators.data.AggregationStrategy attribute), [1] (nirs4all.operators.data.merge.AggregationStrategy attribute), [1] proba_shape (nirs4all.controllers.models.stacking.classification.ClassificationInfo attribute), [1] (nirs4all.controllers.models.stacking.ClassificationInfo attribute), [1] problematic_models (nirs4all.controllers.models.stacking.exceptions.InconsistentLevelError attribute) (nirs4all.controllers.models.stacking.InconsistentLevelError attribute) ProceduralComponentConfig (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.procedural) ProceduralComponentGenerator (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.procedural) PROCESS (nirs4all.data.synthetic.InstrumentCategory attribute) (nirs4all.data.synthetic.instruments.InstrumentCategory attribute) process() (nirs4all.data.synthetic.targets.NonLinearTargetProcessor method) process_hyperparameters() (nirs4all.controllers.JaxModelController method) (nirs4all.controllers.models.base_model.BaseModelController method) (nirs4all.controllers.models.BaseModelController method) (nirs4all.controllers.models.jax_model.JaxModelController method) (nirs4all.controllers.models.JaxModelController method) (nirs4all.controllers.models.PyTorchModelController method) (nirs4all.controllers.models.tensorflow_model.TensorFlowModelController method) (nirs4all.controllers.models.TensorFlowModelController method) (nirs4all.controllers.models.torch_model.PyTorchModelController method) (nirs4all.controllers.PyTorchModelController method) (nirs4all.controllers.TensorFlowModelController method) processing (nirs4all.pipeline.config.context.DataSelector attribute), [1] (nirs4all.pipeline.config.DataSelector attribute), [1] processing_counter (nirs4all.pipeline.config.context.RuntimeContext attribute) (nirs4all.pipeline.config.RuntimeContext attribute) processing_ids (nirs4all.data.FeatureSource property) (nirs4all.data.targets.Targets attribute) (nirs4all.data.targets.Targets property) procrustes_disparity (nirs4all.analysis.transfer_metrics.TransferMetrics attribute) (nirs4all.analysis.TransferMetrics attribute) produces_branches (nirs4all.pipeline.ExecutionStep attribute), [1] (nirs4all.pipeline.trace.execution_trace.ExecutionStep attribute), [1] (nirs4all.pipeline.trace.ExecutionStep attribute), [1] PROGRESS (nirs4all.core.logging.events.EventType attribute) (nirs4all.core.logging.EventType attribute) progress (nirs4all.core.logging.formatters.Symbols property) (nirs4all.core.logging.Symbols property) progress() (nirs4all.core.logging.config.Nirs4allLogger method) (nirs4all.core.logging.Nirs4allLogger method) progress_bar() (in module nirs4all.core.logging) (in module nirs4all.core.logging.progress) ProgressBar (class in nirs4all.core.logging) (class in nirs4all.core.logging.progress) ProgressConfig (class in nirs4all.core.logging) (class in nirs4all.core.logging.progress) project (nirs4all.core.logging.context.RunState attribute), [1] (nirs4all.core.logging.RunState attribute), [1] protein_band_intensity (nirs4all.data.synthetic.fitter.SpectralProperties attribute), [1] (nirs4all.data.synthetic.SpectralProperties attribute), [1] PRUNE (nirs4all.core.logging.events.EventType attribute) (nirs4all.core.logging.EventType attribute) purge_dataset_artifacts() (nirs4all.pipeline.storage.artifacts.artifact_registry.ArtifactRegistry method) (nirs4all.pipeline.storage.artifacts.ArtifactRegistry method) push_chain() (nirs4all.pipeline.trace.recorder.TraceRecorder method) (nirs4all.pipeline.trace.TraceRecorder method) (nirs4all.pipeline.TraceRecorder method) put() (nirs4all.pipeline.storage.artifacts.artifact_loader.LRUCache method) (nirs4all.visualization.prediction_cache.PredictionCache method) pybaseline_correction() (in module nirs4all.operators.transforms) (in module nirs4all.operators.transforms.nirs) PyBaselineCorrection (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.nirs) PyTorchModelController (class in nirs4all.controllers) (class in nirs4all.controllers.models) (class in nirs4all.controllers.models.torch_model)

Q

quantization_noise_enabled (nirs4all.data.synthetic.detectors.NoiseModelConfig attribute), [1] (nirs4all.data.synthetic.NoiseModelConfig attribute), [1] query_best() (nirs4all.data.Predictions method) (nirs4all.data.predictions.Predictions method)

quick_realism_check() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.validation)

R

R2 (nirs4all.operators.data.DisjointSelectionCriterion attribute), [1] (nirs4all.operators.data.merge.DisjointSelectionCriterion attribute), [1] raise_if_invalid() (nirs4all.data.schema.validation.ValidationResult method) (nirs4all.data.schema.validation.validators.ValidationResult method) (nirs4all.data.schema.ValidationResult method) (nirs4all.data.ValidationResult method) random_normal (nirs4all.data.synthetic.accelerated.AcceleratedArrays attribute) (nirs4all.data.synthetic.AcceleratedArrays attribute) random_state (nirs4all.data.PartitionConfig attribute) (nirs4all.data.schema.config.PartitionConfig attribute) (nirs4all.data.schema.PartitionConfig attribute) (nirs4all.data.synthetic.builder.BuilderState attribute) (nirs4all.data.synthetic.config.SyntheticDatasetConfig attribute), [1] (nirs4all.data.synthetic.SyntheticDatasetConfig attribute), [1] random_uniform (nirs4all.data.synthetic.accelerated.AcceleratedArrays attribute) (nirs4all.data.synthetic.AcceleratedArrays attribute) Random_X_Operation (class in nirs4all.operators) (class in nirs4all.operators.transforms) range (nirs4all.data.synthetic.config.TargetConfig attribute), [1] (nirs4all.data.synthetic.TargetConfig attribute), [1] RangeDiscretizer (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.targets) RangeStrategy (class in nirs4all.pipeline.config.generator) rank_branches() (nirs4all.visualization.analysis.branch.BranchAnalyzer method) (nirs4all.visualization.analysis.BranchAnalyzer method) (nirs4all.visualization.BranchAnalyzer method) ranking (nirs4all.analysis.results.TransferSelectionResults attribute), [1] (nirs4all.analysis.TransferSelectionResults attribute), [1] raw_data (nirs4all.pipeline.PipelineRunner attribute) (nirs4all.pipeline.runner.PipelineRunner attribute) (nirs4all.PipelineRunner attribute) raw_metrics (nirs4all.analysis.results.TransferSelectionResults attribute), [1] (nirs4all.analysis.TransferSelectionResults attribute), [1] RAYLEIGH (nirs4all.data.synthetic.scattering.ScatteringModel attribute) (nirs4all.data.synthetic.ScatteringModel attribute) RBFFeaturizer (class in nirs4all.operators.models) (class in nirs4all.operators.models.sklearn) (class in nirs4all.operators.models.sklearn.oklmpls) read_noise_electrons (nirs4all.data.synthetic.detectors.NoiseModelConfig attribute), [1] (nirs4all.data.synthetic.NoiseModelConfig attribute), [1] read_noise_enabled (nirs4all.data.synthetic.detectors.NoiseModelConfig attribute), [1] (nirs4all.data.synthetic.NoiseModelConfig attribute), [1] RealDataFitter (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.fitter) realism_score (nirs4all.data.synthetic.DatasetComparisonResult attribute), [1] (nirs4all.data.synthetic.validation.DatasetComparisonResult attribute), [1] RealismMetric (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.validation) reason (nirs4all.controllers.models.stacking.exceptions.IncompatibleBranchTypeError attribute) (nirs4all.controllers.models.stacking.exceptions.NestedBranchStackingError attribute) (nirs4all.controllers.models.stacking.IncompatibleBranchTypeError attribute) (nirs4all.controllers.models.stacking.NestedBranchStackingError attribute) (nirs4all.operators.filters.base.SampleFilter attribute) (nirs4all.operators.filters.FilterResult attribute), [1] (nirs4all.operators.filters.report.FilterResult attribute), [1] (nirs4all.operators.filters.SampleFilter attribute) (nirs4all.operators.SampleFilter attribute) reconstruct() (nirs4all.controllers.models.stacking.reconstructor.TrainingSetReconstructor method) (nirs4all.controllers.models.stacking.TrainingSetReconstructor method) (nirs4all.controllers.models.TrainingSetReconstructor method) reconstruct_object() (nirs4all.controllers.models.factory.ModelFactory static method) ReconstructionResult (class in nirs4all.controllers.models) (class in nirs4all.controllers.models.stacking) (class in nirs4all.controllers.models.stacking.reconstructor) reconstructor_config (nirs4all.controllers.models.stacking.reconstructor.TrainingSetReconstructor attribute) (nirs4all.controllers.models.stacking.TrainingSetReconstructor attribute) (nirs4all.controllers.models.TrainingSetReconstructor attribute) ReconstructorConfig (class in nirs4all.controllers.models) (class in nirs4all.controllers.models.stacking) (class in nirs4all.controllers.models.stacking.config) record_artifact() (nirs4all.pipeline.trace.recorder.TraceRecorder method) (nirs4all.pipeline.trace.TraceRecorder method) (nirs4all.pipeline.TraceRecorder method) record_input_shapes() (nirs4all.pipeline.config.context.RuntimeContext method) (nirs4all.pipeline.config.RuntimeContext method) (nirs4all.pipeline.trace.recorder.TraceRecorder method) (nirs4all.pipeline.trace.TraceRecorder method) (nirs4all.pipeline.TraceRecorder method) record_output_shapes() (nirs4all.pipeline.config.context.RuntimeContext method) (nirs4all.pipeline.config.RuntimeContext method) (nirs4all.pipeline.trace.recorder.TraceRecorder method) (nirs4all.pipeline.trace.TraceRecorder method) (nirs4all.pipeline.TraceRecorder method) record_step_artifact() (nirs4all.pipeline.config.context.RuntimeContext method) (nirs4all.pipeline.config.RuntimeContext method) record_step_end() (nirs4all.pipeline.config.context.RuntimeContext method) (nirs4all.pipeline.config.RuntimeContext method) record_step_start() (nirs4all.pipeline.config.context.RuntimeContext method) (nirs4all.pipeline.config.RuntimeContext method) RecursivePLS (class in nirs4all.operators.models) (class in nirs4all.operators.models.sklearn) (class in nirs4all.operators.models.sklearn.recursive_pls) reference (nirs4all.data.synthetic.BenchmarkDatasetInfo attribute), [1] (nirs4all.data.synthetic.benchmarks.BenchmarkDatasetInfo attribute), [1] (nirs4all.data.synthetic.environmental.TemperatureEffectParams attribute), [1] (nirs4all.data.synthetic.TemperatureEffectParams attribute), [1] reference_aw (nirs4all.data.synthetic.environmental.MoistureConfig attribute), [1] (nirs4all.data.synthetic.MoistureConfig attribute), [1] reference_material (nirs4all.data.synthetic.measurement_modes.ReflectanceConfig attribute), [1] (nirs4all.data.synthetic.ReflectanceConfig attribute), [1] reference_reflectance (nirs4all.data.synthetic.measurement_modes.ReflectanceConfig attribute), [1] (nirs4all.data.synthetic.ReflectanceConfig attribute), [1] reference_size_um (nirs4all.data.synthetic.ParticleSizeConfig attribute), [1] (nirs4all.data.synthetic.scattering.ParticleSizeConfig attribute), [1] reference_spectrum (nirs4all.data.synthetic.EMSCConfig attribute), [1] (nirs4all.data.synthetic.scattering.EMSCConfig attribute), [1] reference_temperature (nirs4all.data.synthetic.environmental.TemperatureConfig attribute), [1] (nirs4all.data.synthetic.TemperatureConfig attribute), [1] reference_type (nirs4all.data.synthetic.measurement_modes.TransmittanceConfig attribute), [1] (nirs4all.data.synthetic.TransmittanceConfig attribute), [1] REFLECTANCE (nirs4all.data.schema.config.SignalTypeEnum attribute) (nirs4all.data.schema.SignalTypeEnum attribute) (nirs4all.data.signal_type.SignalType attribute) (nirs4all.data.SignalType attribute) (nirs4all.data.synthetic.fitter.MeasurementModeInference attribute) (nirs4all.data.synthetic.measurement_modes.MeasurementMode attribute) reflectance (nirs4all.data.synthetic.measurement_modes.MeasurementModeConfig attribute), [1] REFLECTANCE (nirs4all.data.synthetic.MeasurementMode attribute) (nirs4all.data.synthetic.MeasurementModeInference attribute) REFLECTANCE_PERCENT (nirs4all.data.schema.config.SignalTypeEnum attribute) (nirs4all.data.schema.SignalTypeEnum attribute) (nirs4all.data.signal_type.SignalType attribute) (nirs4all.data.SignalType attribute) reflectance_to_absorbance() (in module nirs4all.operators.transforms) (in module nirs4all.operators.transforms.nirs) (nirs4all.data.synthetic.measurement_modes.MeasurementModeSimulator method) (nirs4all.data.synthetic.MeasurementModeSimulator method) ReflectanceConfig (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.measurement_modes) ReflectanceToAbsorbance (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.nirs) reflector_reflectance (nirs4all.data.synthetic.measurement_modes.TransflectanceConfig attribute), [1] (nirs4all.data.synthetic.TransflectanceConfig attribute), [1] reflector_type (nirs4all.data.synthetic.measurement_modes.TransflectanceConfig attribute), [1] (nirs4all.data.synthetic.TransflectanceConfig attribute), [1] refresh_rate (nirs4all.core.logging.progress.ProgressConfig attribute), [1] (nirs4all.core.logging.ProgressConfig attribute), [1] regime_method (nirs4all.data.synthetic.builder.BuilderState attribute) (nirs4all.data.synthetic.config.MultiRegimeConfig attribute), [1] (nirs4all.data.synthetic.targets.NonLinearTargetConfig attribute), [1] regime_overlap (nirs4all.data.synthetic.builder.BuilderState attribute) (nirs4all.data.synthetic.config.MultiRegimeConfig attribute), [1] (nirs4all.data.synthetic.targets.NonLinearTargetConfig attribute), [1] region_specific (nirs4all.data.synthetic.environmental.TemperatureConfig attribute), [1] (nirs4all.data.synthetic.TemperatureConfig attribute), [1] register() (nirs4all.data.loaders.base.LoaderRegistry method) (nirs4all.data.loaders.LoaderRegistry method) (nirs4all.operators.models.selection.SelectorFactory class method) (nirs4all.operators.models.SelectorFactory class method) (nirs4all.pipeline.storage.artifacts.artifact_registry.ArtifactRegistry method) (nirs4all.pipeline.storage.artifacts.ArtifactRegistry method) (nirs4all.pipeline.storage.io.SimulationSaver method) (nirs4all.pipeline.storage.SimulationSaver method) register_builtin_presets() (in module nirs4all.pipeline.config.generator) register_controller() (in module nirs4all) (in module nirs4all.controllers) (in module nirs4all.controllers.registry) register_function() (nirs4all.data.aggregation.Aggregator method) (nirs4all.data.aggregation.aggregator.Aggregator method) register_loader() (in module nirs4all.data.loaders) (in module nirs4all.data.loaders.base) register_meta_model() (nirs4all.pipeline.storage.artifacts.artifact_registry.ArtifactRegistry method) (nirs4all.pipeline.storage.artifacts.ArtifactRegistry method) register_preset() (in module nirs4all.pipeline.config.generator) register_samples() (nirs4all.data.indexer.Indexer method) register_samples_dict() (nirs4all.data.indexer.Indexer method) register_strategy() (in module nirs4all.pipeline.config.generator) register_with_chain() (nirs4all.pipeline.storage.artifacts.artifact_registry.ArtifactRegistry method) (nirs4all.pipeline.storage.artifacts.ArtifactRegistry method) register_workspace() (nirs4all.pipeline.storage.io.SimulationSaver method) (nirs4all.pipeline.storage.SimulationSaver method) registry (nirs4all.pipeline.steps.ControllerRouter attribute) (nirs4all.pipeline.steps.router.ControllerRouter attribute) REGRESSION (nirs4all.controllers.models.stacking.classification.StackingTaskType attribute), [1] (nirs4all.controllers.models.stacking.StackingTaskType attribute), [1] (nirs4all.core.task_type.TaskType attribute) (nirs4all.core.TaskType attribute) (nirs4all.data.schema.config.TaskType attribute) (nirs4all.data.schema.TaskType attribute) (nirs4all.data.TaskType attribute) regression() (in module nirs4all.api.generate) (nirs4all.data.synthetic.TargetGenerator method) (nirs4all.data.synthetic.targets.TargetGenerator method) remap_steps() (nirs4all.pipeline.storage.artifacts.operator_chain.OperatorChain method) (nirs4all.pipeline.storage.artifacts.OperatorChain method) REMOVE (nirs4all.data.schema.config.NAPolicy attribute) (nirs4all.data.schema.NAPolicy attribute) remove() (nirs4all.pipeline.storage.artifacts.artifact_loader.LRUCache method) remove_artifact() (nirs4all.pipeline.storage.artifacts.artifact_registry.DependencyGraph method) (nirs4all.pipeline.storage.artifacts.DependencyGraph method) removed (nirs4all.data.serialization.serializer.ConfigDiff attribute), [1] render() (nirs4all.visualization.branch_diagram.BranchDiagram method) (nirs4all.visualization.branch_diagram.PipelineDiagram method) (nirs4all.visualization.BranchDiagram method) (nirs4all.visualization.charts.base.BaseChart method) (nirs4all.visualization.charts.BaseChart method) (nirs4all.visualization.charts.candlestick.CandlestickChart method) (nirs4all.visualization.charts.CandlestickChart method) (nirs4all.visualization.charts.confusion_matrix.ConfusionMatrixChart method) (nirs4all.visualization.charts.ConfusionMatrixChart method) (nirs4all.visualization.charts.heatmap.HeatmapChart method) (nirs4all.visualization.charts.HeatmapChart method) (nirs4all.visualization.charts.histogram.ScoreHistogramChart method) (nirs4all.visualization.charts.ScoreHistogramChart method) (nirs4all.visualization.charts.top_k_comparison.TopKComparisonChart method) (nirs4all.visualization.charts.TopKComparisonChart method) (nirs4all.visualization.pipeline_diagram.PipelineDiagram method) (nirs4all.visualization.PipelineDiagram method) RepetitionConfig (class in nirs4all.operators.data) (class in nirs4all.operators.data.repetition) repetitions (nirs4all.data.synthetic.metadata.MetadataGenerationResult attribute), [1] (nirs4all.data.synthetic.MetadataGenerationResult attribute), [1] replace_features() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.SpectroDataset method)

replace_processing (nirs4all.pipeline.config.context.StepMetadata attribute), [1] (nirs4all.pipeline.config.StepMetadata attribute), [1] replace_processings() (nirs4all.data.indexer.Indexer method) REPORT (nirs4all.core.logging.events.EventType attribute) (nirs4all.core.logging.EventType attribute) report (nirs4all.data.loaders.base.LoaderResult attribute) (nirs4all.data.loaders.LoaderResult attribute) (nirs4all.data.selection.sample_linker.LinkingResult attribute), [1] RepToPPController (class in nirs4all.controllers.data) (class in nirs4all.controllers.data.repetition) RepToSourcesController (class in nirs4all.controllers.data) (class in nirs4all.controllers.data.repetition) require_backend() (in module nirs4all.utils) (in module nirs4all.utils.backend) Resampler (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.resampler) ResamplerController (class in nirs4all.controllers) (class in nirs4all.controllers.data) (class in nirs4all.controllers.data.resampler) ResampleTransformer (class in nirs4all.operators) (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.features) RESERVED_KEYWORDS (nirs4all.pipeline.steps.parser.StepParser attribute) (nirs4all.pipeline.steps.StepParser attribute) reset() (nirs4all.core.logging.handlers.ThrottledHandler method) (nirs4all.core.logging.ThrottledHandler method) reset_chain_to() (nirs4all.pipeline.trace.recorder.TraceRecorder method) (nirs4all.pipeline.trace.TraceRecorder method) (nirs4all.pipeline.TraceRecorder method) reset_ephemeral_flags() (nirs4all.pipeline.config.context.StepMetadata method) (nirs4all.pipeline.config.StepMetadata method) reset_exclusions() (nirs4all.data.indexer.Indexer method) reset_features() (nirs4all.data.FeatureSource method) reset_logging() (in module nirs4all.core.logging) (in module nirs4all.core.logging.config) reset_processing_counter() (nirs4all.pipeline.config.context.RuntimeContext method) (nirs4all.pipeline.config.RuntimeContext method) reset_processings() (nirs4all.data.indexer.Indexer method) reset_registry() (in module nirs4all.controllers.registry) reshape_reps_to_preprocessings() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.SpectroDataset method) reshape_reps_to_sources() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.SpectroDataset method) resolve() (nirs4all.pipeline.PredictionResolver method) (nirs4all.pipeline.resolver.PredictionResolver method) (nirs4all.pipeline.storage.artifacts.artifact_registry.ArtifactRegistry method) (nirs4all.pipeline.storage.artifacts.ArtifactRegistry method) resolve_by_hash() (nirs4all.pipeline.storage.artifacts.artifact_registry.ArtifactRegistry method) (nirs4all.pipeline.storage.artifacts.ArtifactRegistry method) resolve_column() (nirs4all.operators.data.repetition.RepetitionConfig method) (nirs4all.operators.data.RepetitionConfig method) resolve_dependencies() (nirs4all.pipeline.storage.artifacts.artifact_registry.ArtifactRegistry method) (nirs4all.pipeline.storage.artifacts.artifact_registry.DependencyGraph method) (nirs4all.pipeline.storage.artifacts.ArtifactRegistry method) (nirs4all.pipeline.storage.artifacts.DependencyGraph method) resolve_preset() (in module nirs4all.pipeline.config.generator) resolve_presets_recursive() (in module nirs4all.pipeline.config.generator) resolve_target() (nirs4all.pipeline.storage.io_resolver.TargetResolver method) (nirs4all.pipeline.storage.TargetResolver method) (nirs4all.pipeline.TargetResolver method) ResolvedPrediction (class in nirs4all.pipeline) (class in nirs4all.pipeline.resolver) resolver (nirs4all.pipeline.bundle.BundleGenerator attribute) (nirs4all.pipeline.bundle.generator.BundleGenerator attribute) (nirs4all.pipeline.BundleGenerator attribute) (nirs4all.pipeline.Retrainer attribute) (nirs4all.pipeline.retrainer.Retrainer attribute) (nirs4all.pipeline.storage.io.SimulationSaver property) (nirs4all.pipeline.storage.SimulationSaver property) response (nirs4all.data.synthetic.detectors.DetectorSpectralResponse attribute), [1] (nirs4all.data.synthetic.DetectorSpectralResponse attribute), [1] results_dir (nirs4all.pipeline.storage.artifacts.artifact_loader.ArtifactLoader attribute) (nirs4all.pipeline.storage.artifacts.ArtifactLoader attribute) retrain() (in module nirs4all) (in module nirs4all.api) (in module nirs4all.api.retrain) (nirs4all.api.Session method) (nirs4all.api.session.Session method) (nirs4all.pipeline.PipelineRunner method) (nirs4all.pipeline.Retrainer method) (nirs4all.pipeline.retrainer.Retrainer method) (nirs4all.pipeline.runner.PipelineRunner method) (nirs4all.PipelineRunner method) (nirs4all.Session method) retrain_config (nirs4all.pipeline.config.context.RuntimeContext attribute), [1] (nirs4all.pipeline.config.RuntimeContext attribute), [1] (nirs4all.pipeline.RetrainArtifactProvider attribute) (nirs4all.pipeline.retrainer.RetrainArtifactProvider attribute) RetrainArtifactProvider (class in nirs4all.pipeline) (class in nirs4all.pipeline.retrainer) RetrainConfig (class in nirs4all.pipeline) (class in nirs4all.pipeline.retrainer) Retrainer (class in nirs4all.pipeline) (class in nirs4all.pipeline.retrainer) RetrainMode (class in nirs4all.pipeline) (class in nirs4all.pipeline.retrainer) RMSE (nirs4all.operators.data.DisjointSelectionCriterion attribute), [1] (nirs4all.operators.data.merge.DisjointSelectionCriterion attribute), [1] rmsecv_history_ (nirs4all.operators.transforms.CARS attribute) (nirs4all.operators.transforms.feature_selection.CARS attribute) rng (nirs4all.data.synthetic.ComponentLibrary attribute) (nirs4all.data.synthetic.components.ComponentLibrary attribute) (nirs4all.data.synthetic.detectors.DetectorSimulator attribute) (nirs4all.data.synthetic.DetectorSimulator attribute) (nirs4all.data.synthetic.EMSCTransformSimulator attribute) (nirs4all.data.synthetic.environmental.EnvironmentalEffectsSimulator attribute) (nirs4all.data.synthetic.environmental.MoistureEffectSimulator attribute) (nirs4all.data.synthetic.environmental.TemperatureEffectSimulator attribute) (nirs4all.data.synthetic.EnvironmentalEffectsSimulator attribute) (nirs4all.data.synthetic.instruments.InstrumentSimulator attribute) (nirs4all.data.synthetic.InstrumentSimulator attribute) (nirs4all.data.synthetic.measurement_modes.MeasurementModeSimulator attribute) (nirs4all.data.synthetic.MeasurementModeSimulator attribute) (nirs4all.data.synthetic.metadata.MetadataGenerator attribute) (nirs4all.data.synthetic.MetadataGenerator attribute) (nirs4all.data.synthetic.MoistureEffectSimulator attribute) (nirs4all.data.synthetic.MultiSourceGenerator attribute) (nirs4all.data.synthetic.ParticleSizeSimulator attribute) (nirs4all.data.synthetic.procedural.ProceduralComponentGenerator attribute) (nirs4all.data.synthetic.ProceduralComponentGenerator attribute) (nirs4all.data.synthetic.scattering.EMSCTransformSimulator attribute) (nirs4all.data.synthetic.scattering.ParticleSizeSimulator attribute) (nirs4all.data.synthetic.scattering.ScatteringCoefficientGenerator attribute) (nirs4all.data.synthetic.scattering.ScatteringEffectsSimulator attribute) (nirs4all.data.synthetic.ScatteringCoefficientGenerator attribute) (nirs4all.data.synthetic.ScatteringEffectsSimulator attribute) (nirs4all.data.synthetic.sources.MultiSourceGenerator attribute) (nirs4all.data.synthetic.TargetGenerator attribute) (nirs4all.data.synthetic.targets.TargetGenerator attribute) (nirs4all.data.synthetic.TemperatureEffectSimulator attribute) RobustPLS (class in nirs4all.operators.models) (class in nirs4all.operators.models.sklearn) (class in nirs4all.operators.models.sklearn.robust_pls) RobustStandardNormalVariate (class in nirs4all.operators) (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.scalers) RoleAssigner (class in nirs4all.data) (class in nirs4all.data.selection) (class in nirs4all.data.selection.role_assigner) RoleAssignmentError, [1], [2] RoleAssignmentResult (class in nirs4all.data.selection.role_assigner) RollingBall (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.nirs) Rotate_Translate (class in nirs4all.operators) (class in nirs4all.operators.transforms) RotatingRunFileHandler (class in nirs4all.core.logging) (class in nirs4all.core.logging.handlers) route() (nirs4all.pipeline.steps.ControllerRouter method) (nirs4all.pipeline.steps.router.ControllerRouter method) route_from_raw() (nirs4all.pipeline.steps.ControllerRouter method) (nirs4all.pipeline.steps.router.ControllerRouter method) router (nirs4all.pipeline.steps.step_runner.StepRunner attribute) (nirs4all.pipeline.steps.StepRunner attribute) RowSelectionError, [1], [2] RowSelectionResult (class in nirs4all.data.selection.row_selector) RowSelector (class in nirs4all.data) (class in nirs4all.data.selection) (class in nirs4all.data.selection.row_selector) RUN (nirs4all.pipeline.resolver.SourceType attribute), [1] (nirs4all.pipeline.SourceType attribute), [1] run() (in module nirs4all) (in module nirs4all.api) (in module nirs4all.api.run) (nirs4all.api.Session method) (nirs4all.api.session.Session method) (nirs4all.pipeline.PipelineRunner method) (nirs4all.pipeline.runner.PipelineRunner method) (nirs4all.PipelineRunner method) (nirs4all.Session method) run_dir (nirs4all.pipeline.minimal_predictor.MinimalPredictor attribute) (nirs4all.pipeline.MinimalPredictor attribute) (nirs4all.pipeline.ResolvedPrediction attribute), [1] (nirs4all.pipeline.resolver.ResolvedPrediction attribute), [1] run_footer() (nirs4all.core.logging.config.Nirs4allLogger method) (nirs4all.core.logging.Nirs4allLogger method) run_header() (nirs4all.core.logging.config.Nirs4allLogger method) (nirs4all.core.logging.Nirs4allLogger method) run_id (nirs4all.core.logging.context.RunState attribute), [1] (nirs4all.core.logging.events.LogEvent attribute), [1] (nirs4all.core.logging.LogEvent attribute), [1] (nirs4all.core.logging.RunState attribute), [1] run_level() (nirs4all.core.logging.MultiLevelProgress method) (nirs4all.core.logging.progress.MultiLevelProgress method) run_name (nirs4all.core.logging.context.RunState attribute), [1] (nirs4all.core.logging.RunState attribute), [1] runner (nirs4all.api.Session attribute) (nirs4all.api.Session property) (nirs4all.api.session.Session attribute) (nirs4all.api.session.Session property) (nirs4all.pipeline.Explainer attribute) (nirs4all.pipeline.explainer.Explainer attribute) (nirs4all.pipeline.Predictor attribute) (nirs4all.pipeline.predictor.Predictor attribute) (nirs4all.pipeline.Retrainer attribute) (nirs4all.pipeline.retrainer.Retrainer attribute) (nirs4all.Session attribute) (nirs4all.Session property) RunResult (class in nirs4all) (class in nirs4all.api) (class in nirs4all.api.result) runs_dir (nirs4all.pipeline.execution.orchestrator.PipelineOrchestrator attribute) (nirs4all.pipeline.execution.PipelineOrchestrator attribute) (nirs4all.pipeline.PipelineRunner property) (nirs4all.pipeline.PredictionResolver attribute) (nirs4all.pipeline.resolver.PredictionResolver attribute) (nirs4all.pipeline.runner.PipelineRunner property) (nirs4all.PipelineRunner property) RunState (class in nirs4all.core.logging) (class in nirs4all.core.logging.context) RUNTIME (nirs4all.data.schema.validation.error_codes.ErrorCategory attribute) (nirs4all.data.schema.validation.ErrorCategory attribute) RuntimeContext (class in nirs4all.pipeline.config) (class in nirs4all.pipeline.config.context) rv_coefficient (nirs4all.analysis.transfer_metrics.TransferMetrics attribute) (nirs4all.analysis.TransferMetrics attribute)

S

sample() (nirs4all.data.synthetic.ConcentrationPrior method) (nirs4all.data.synthetic.domains.ConcentrationPrior method) (nirs4all.data.synthetic.ParticleSizeDistribution method) (nirs4all.data.synthetic.prior.PriorSampler method) (nirs4all.data.synthetic.PriorSampler method) (nirs4all.data.synthetic.scattering.ParticleSizeDistribution method) sample_batch() (nirs4all.data.synthetic.prior.PriorSampler method) (nirs4all.data.synthetic.PriorSampler method) sample_components() (nirs4all.data.synthetic.DomainConfig method) (nirs4all.data.synthetic.domains.DomainConfig method) (nirs4all.data.synthetic.prior.PriorSampler method) (nirs4all.data.synthetic.PriorSampler method) sample_concentrations() (nirs4all.data.synthetic.DomainConfig method) (nirs4all.data.synthetic.domains.DomainConfig method) sample_count (nirs4all.data.selection.sample_linker.LinkingResult attribute), [1] sample_domain() (nirs4all.data.synthetic.prior.PriorSampler method) (nirs4all.data.synthetic.PriorSampler method) sample_for_domain() (nirs4all.data.synthetic.prior.PriorSampler method) (nirs4all.data.synthetic.PriorSampler method) sample_for_instrument() (nirs4all.data.synthetic.prior.PriorSampler method) (nirs4all.data.synthetic.PriorSampler method) sample_id_prefix (nirs4all.data.synthetic.builder.BuilderState attribute) (nirs4all.data.synthetic.config.MetadataConfig attribute), [1] (nirs4all.data.synthetic.MetadataConfig attribute), [1] sample_ids (nirs4all.controllers.data.merge.DisjointBranchInfo attribute), [1] (nirs4all.data.synthetic.benchmarks.LoadedBenchmarkDataset attribute), [1] (nirs4all.data.synthetic.LoadedBenchmarkDataset attribute), [1] (nirs4all.data.synthetic.metadata.MetadataGenerationResult attribute), [1] (nirs4all.data.synthetic.MetadataGenerationResult attribute), [1] (nirs4all.operators.data.merge.DisjointBranchInfo attribute), [1] sample_indices (nirs4all.api.PredictResult attribute), [1] (nirs4all.api.result.PredictResult attribute), [1] (nirs4all.controllers.models.stacking.branch_validator.BranchInfo attribute) (nirs4all.controllers.models.stacking.BranchInfo attribute) (nirs4all.controllers.models.stacking.BranchPredictionInfo attribute), [1] (nirs4all.controllers.models.stacking.crossbranch.BranchPredictionInfo attribute), [1] (nirs4all.PredictResult attribute), [1] sample_instrument() (nirs4all.data.synthetic.prior.PriorSampler method) (nirs4all.data.synthetic.PriorSampler method) sample_instrument_category() (nirs4all.data.synthetic.prior.PriorSampler method) (nirs4all.data.synthetic.PriorSampler method) sample_matrix_type() (nirs4all.data.synthetic.prior.PriorSampler method) (nirs4all.data.synthetic.PriorSampler method) sample_measurement_mode() (nirs4all.data.synthetic.prior.PriorSampler method) (nirs4all.data.synthetic.PriorSampler method) sample_n_samples() (nirs4all.data.synthetic.prior.PriorSampler method) (nirs4all.data.synthetic.PriorSampler method) sample_noise_level() (nirs4all.data.synthetic.prior.PriorSampler method) (nirs4all.data.synthetic.PriorSampler method) sample_particle_size() (nirs4all.data.synthetic.prior.PriorSampler method) (nirs4all.data.synthetic.PriorSampler method) SAMPLE_PARTITIONER (nirs4all.controllers.models.stacking.branch_validator.BranchType attribute) (nirs4all.controllers.models.stacking.BranchType attribute) (nirs4all.operators.data.BranchType attribute), [1] (nirs4all.operators.data.merge.BranchType attribute), [1] sample_presentation (nirs4all.data.synthetic.measurement_modes.ReflectanceConfig attribute), [1] (nirs4all.data.synthetic.ReflectanceConfig attribute), [1] sample_prior() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.prior) sample_prior_batch() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.prior) sample_refractive_index (nirs4all.data.synthetic.ATRConfig attribute), [1] (nirs4all.data.synthetic.measurement_modes.ATRConfig attribute), [1] sample_target_config() (nirs4all.data.synthetic.prior.PriorSampler method) (nirs4all.data.synthetic.PriorSampler method) sample_temperature (nirs4all.data.synthetic.environmental.TemperatureConfig attribute), [1] (nirs4all.data.synthetic.TemperatureConfig attribute), [1] sample_temperature() (nirs4all.data.synthetic.prior.PriorSampler method) (nirs4all.data.synthetic.PriorSampler method) sample_to_sample_offset_std (nirs4all.data.synthetic.fitter.SpectralProperties attribute), [1] (nirs4all.data.synthetic.SpectralProperties attribute), [1] sample_to_sample_slope_std (nirs4all.data.synthetic.fitter.SpectralProperties attribute), [1] (nirs4all.data.synthetic.SpectralProperties attribute), [1] sample_to_sample_variation (nirs4all.data.synthetic.measurement_modes.ScatteringConfig attribute), [1] (nirs4all.data.synthetic.ScatteringConfig attribute), [1] sample_type (nirs4all.data.synthetic.BenchmarkDatasetInfo attribute), [1] (nirs4all.data.synthetic.benchmarks.BenchmarkDatasetInfo attribute), [1] sample_variation (nirs4all.data.synthetic.scattering.ScatteringCoefficientConfig attribute), [1] (nirs4all.data.synthetic.ScatteringCoefficientConfig attribute), [1] sample_weights_ (nirs4all.operators.models.RobustPLS attribute) (nirs4all.operators.models.sklearn.robust_pls.RobustPLS attribute) (nirs4all.operators.models.sklearn.RobustPLS attribute) sample_with_seed() (in module nirs4all.pipeline.config.generator) SampleAugmentationController (class in nirs4all.controllers) (class in nirs4all.controllers.data) (class in nirs4all.controllers.data.sample_augmentation) SampleFilter (class in nirs4all.operators) (class in nirs4all.operators.filters) (class in nirs4all.operators.filters.base) SampleFilterController (class in nirs4all.controllers) (class in nirs4all.controllers.data) (class in nirs4all.controllers.data.sample_filter) SampleLinker (class in nirs4all.data) (class in nirs4all.data.selection) (class in nirs4all.data.selection.sample_linker) SamplePartitionerController (class in nirs4all.controllers.data) (class in nirs4all.controllers.data.sample_partitioner) SampleStrategy (class in nirs4all.pipeline.config.generator) save() (nirs4all.api.Session method) (nirs4all.api.session.Session method) (nirs4all.data.PredictionResultsList method) (nirs4all.data.predictions.PredictionResultsList method) (nirs4all.data.serialization.ConfigSerializer method) (nirs4all.data.serialization.serializer.ConfigSerializer method) (nirs4all.data.synthetic.FittedParameters method) (nirs4all.data.synthetic.fitter.FittedParameters method) (nirs4all.Session method) save_all_to_csv() (nirs4all.data.Predictions static method) (nirs4all.data.predictions.Predictions static method) save_artifacts (nirs4all.pipeline.execution.orchestrator.PipelineOrchestrator attribute) (nirs4all.pipeline.execution.PipelineOrchestrator attribute) (nirs4all.pipeline.PipelineRunner attribute) (nirs4all.pipeline.runner.PipelineRunner attribute) (nirs4all.PipelineRunner attribute) save_charts (nirs4all.pipeline.execution.orchestrator.PipelineOrchestrator attribute) (nirs4all.pipeline.execution.PipelineOrchestrator attribute) (nirs4all.pipeline.PipelineRunner attribute) (nirs4all.pipeline.runner.PipelineRunner attribute) (nirs4all.PipelineRunner attribute) save_execution_trace() (nirs4all.pipeline.storage.manifest_manager.ManifestManager method) (nirs4all.pipeline.storage.ManifestManager method) save_file() (nirs4all.pipeline.PipelineWriter method) (nirs4all.pipeline.storage.io.SimulationSaver method) (nirs4all.pipeline.storage.io_writer.PipelineWriter method) (nirs4all.pipeline.storage.PipelineWriter method) (nirs4all.pipeline.storage.SimulationSaver method) save_filtered() (nirs4all.workspace.library_manager.LibraryManager method) (nirs4all.workspace.LibraryManager method) save_fullrun() (nirs4all.workspace.library_manager.LibraryManager method) (nirs4all.workspace.LibraryManager method) save_json() (nirs4all.pipeline.PipelineWriter method) (nirs4all.pipeline.storage.io.SimulationSaver method) (nirs4all.pipeline.storage.io_writer.PipelineWriter method) (nirs4all.pipeline.storage.PipelineWriter method) (nirs4all.pipeline.storage.SimulationSaver method) save_manifest() (nirs4all.pipeline.storage.manifest_manager.ManifestManager method) (nirs4all.pipeline.storage.ManifestManager method) save_model() (nirs4all.controllers.models.autogluon_model.AutoGluonModelController method) (nirs4all.controllers.models.AutoGluonModelController method) (nirs4all.controllers.models.base_model.BaseModelController method) (nirs4all.controllers.models.BaseModelController method) save_output() (nirs4all.pipeline.PipelineWriter method) (nirs4all.pipeline.storage.io.SimulationSaver method) (nirs4all.pipeline.storage.io_writer.PipelineWriter method) (nirs4all.pipeline.storage.PipelineWriter method) (nirs4all.pipeline.storage.SimulationSaver method) save_pipeline_full() (nirs4all.workspace.library_manager.LibraryManager method) (nirs4all.workspace.LibraryManager method) save_predictions_to_csv() (nirs4all.data.Predictions static method) (nirs4all.data.predictions.Predictions static method) save_results() (nirs4all.visualization.analysis.shap.ShapAnalyzer method) (nirs4all.visualization.analysis.ShapAnalyzer method) save_template() (nirs4all.pipeline.PipelineLibrary method) (nirs4all.pipeline.storage.library.PipelineLibrary method) (nirs4all.pipeline.storage.PipelineLibrary method) (nirs4all.workspace.library_manager.LibraryManager method) (nirs4all.workspace.LibraryManager method) save_to_csv() (nirs4all.data.PredictionResult method) (nirs4all.data.predictions.PredictionResult method) save_to_file() (nirs4all.data.Predictions method) (nirs4all.data.predictions.Predictions method) save_to_parquet() (nirs4all.data.Predictions method) (nirs4all.data.predictions.Predictions method) saved_at (nirs4all.pipeline.storage.artifacts.artifact_persistence.ArtifactMeta attribute) saver (nirs4all.pipeline.config.context.RuntimeContext attribute), [1] (nirs4all.pipeline.config.RuntimeContext attribute), [1] (nirs4all.pipeline.Explainer attribute) (nirs4all.pipeline.explainer.Explainer attribute) (nirs4all.pipeline.minimal_predictor.MinimalPredictor attribute) (nirs4all.pipeline.MinimalPredictor attribute) (nirs4all.pipeline.Predictor attribute) (nirs4all.pipeline.predictor.Predictor attribute) savgol() (in module nirs4all.operators) (in module nirs4all.operators.transforms) (in module nirs4all.operators.transforms.nirs) savgol_only() (in module nirs4all.operators.transforms) (in module nirs4all.operators.transforms.presets) SavitzkyGolay (class in nirs4all.operators) (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.nirs) scalers_ (nirs4all.operators.transforms.nirs.WaveletPCA attribute) (nirs4all.operators.transforms.WaveletPCA attribute) scan_speed (nirs4all.data.synthetic.InstrumentArchetype attribute), [1] (nirs4all.data.synthetic.instruments.InstrumentArchetype attribute), [1] scan_to_scan_noise (nirs4all.data.synthetic.instruments.MultiScanConfig attribute), [1] (nirs4all.data.synthetic.MultiScanConfig attribute), [1] scatter_alpha_std (nirs4all.data.synthetic.FittedParameters attribute), [1] (nirs4all.data.synthetic.fitter.FittedParameters attribute), [1] scatter_baseline_curvature (nirs4all.data.synthetic.fitter.SpectralProperties attribute), [1] (nirs4all.data.synthetic.SpectralProperties attribute), [1] scatter_baseline_slope (nirs4all.data.synthetic.fitter.SpectralProperties attribute), [1] (nirs4all.data.synthetic.SpectralProperties attribute), [1] scatter_beta_std (nirs4all.data.synthetic.FittedParameters attribute), [1] (nirs4all.data.synthetic.fitter.FittedParameters attribute), [1] scatter_gen (nirs4all.data.synthetic.scattering.ScatteringEffectsSimulator attribute) (nirs4all.data.synthetic.ScatteringEffectsSimulator attribute) scattering (nirs4all.data.synthetic.measurement_modes.MeasurementModeConfig attribute), [1] scattering_coefficient (nirs4all.data.synthetic.scattering.ScatteringEffectsConfig attribute), [1] (nirs4all.data.synthetic.ScatteringEffectsConfig attribute), [1] scattering_effects_simulator (nirs4all.data.synthetic.generator.SyntheticNIRSGenerator attribute) (nirs4all.data.synthetic.SyntheticNIRSGenerator attribute) scattering_inference (nirs4all.data.synthetic.FittedParameters attribute), [1] (nirs4all.data.synthetic.fitter.FittedParameters attribute), [1] ScatteringCoefficientConfig (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.scattering) ScatteringCoefficientGenerator (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.scattering) ScatteringConfig (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.measurement_modes) ScatteringEffectsConfig (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.scattering) ScatteringEffectsSimulator (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.scattering) ScatteringInference (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.fitter) ScatteringModel (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.scattering) ScatterSimulationMSC (class in nirs4all.operators.transforms) SCHEMA (nirs4all.data.schema.validation.error_codes.ErrorCategory attribute) (nirs4all.data.schema.validation.ErrorCategory attribute) score (nirs4all.controllers.models.components.PartitionPrediction attribute) (nirs4all.controllers.models.components.prediction_assembler.PartitionPrediction attribute) score() (nirs4all.sklearn.classifier.NIRSPipelineClassifier method) (nirs4all.sklearn.NIRSPipeline method), [1] (nirs4all.sklearn.NIRSPipelineClassifier method) (nirs4all.sklearn.pipeline.NIRSPipeline method), [1] score_calculator (nirs4all.controllers.models.base_model.BaseModelController attribute) (nirs4all.controllers.models.BaseModelController attribute) ScoreCalculator (class in nirs4all.controllers.models.components) (class in nirs4all.controllers.models.components.score_calculator) ScoreHistogramChart (class in nirs4all.visualization.charts) (class in nirs4all.visualization.charts.histogram) ScoreNormalizer (class in nirs4all.visualization.chart_utils) (class in nirs4all.visualization.chart_utils.normalizer) second_derivative() (in module nirs4all.operators.transforms) (in module nirs4all.operators.transforms.nirs) SecondDerivative (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.nirs) SELECT (nirs4all.data.schema.config.VariationMode attribute) (nirs4all.data.schema.VariationMode attribute) select (nirs4all.operators.data.BranchPredictionConfig attribute), [1] (nirs4all.operators.data.merge.BranchPredictionConfig attribute), [1] select() (nirs4all.data.ColumnSelector method) (nirs4all.data.RowSelector method) (nirs4all.data.selection.column_selector.ColumnSelector method) (nirs4all.data.selection.ColumnSelector method) (nirs4all.data.selection.row_selector.RowSelector method) (nirs4all.data.selection.RowSelector method) (nirs4all.operators.models.AllPreviousModelsSelector method) (nirs4all.operators.models.DiversitySelector method) (nirs4all.operators.models.ExplicitModelSelector method) (nirs4all.operators.models.selection.AllPreviousModelsSelector method) (nirs4all.operators.models.selection.DiversitySelector method) (nirs4all.operators.models.selection.ExplicitModelSelector method) (nirs4all.operators.models.selection.SourceModelSelector method) (nirs4all.operators.models.selection.TopKByMetricSelector method) (nirs4all.operators.models.SourceModelSelector method) (nirs4all.operators.models.TopKByMetricSelector method) select_by (nirs4all.controllers.data.merge.DisjointMergeMetadata attribute), [1] (nirs4all.controllers.data.merge.DisjointMergeResult attribute), [1] (nirs4all.operators.data.merge.DisjointMergeMetadata attribute), [1] (nirs4all.operators.data.merge.MergeConfig attribute) (nirs4all.operators.data.MergeConfig attribute) select_models() (nirs4all.controllers.data.merge.ModelSelector method) (nirs4all.controllers.shared.model_selector.ModelSelector method) (nirs4all.controllers.shared.ModelSelector method) select_models_global() (nirs4all.controllers.data.merge.ModelSelector method) (nirs4all.controllers.shared.model_selector.ModelSelector method) (nirs4all.controllers.shared.ModelSelector method) selected_indices_ (nirs4all.operators.transforms.CARS attribute) (nirs4all.operators.transforms.feature_selection.CARS attribute) (nirs4all.operators.transforms.feature_selection.MCUVE attribute) (nirs4all.operators.transforms.MCUVE attribute) selected_models (nirs4all.controllers.data.merge.DisjointBranchInfo attribute), [1] (nirs4all.operators.data.merge.DisjointBranchInfo attribute), [1] selection_mask_ (nirs4all.operators.transforms.CARS attribute) (nirs4all.operators.transforms.feature_selection.CARS attribute) (nirs4all.operators.transforms.feature_selection.MCUVE attribute) (nirs4all.operators.transforms.MCUVE attribute) SelectionResult (class in nirs4all.data.selection.column_selector) SelectionStrategy (class in nirs4all.operators.data) (class in nirs4all.operators.data.merge) selector (nirs4all.operators.models.meta.MetaModel attribute) (nirs4all.operators.models.MetaModel attribute) (nirs4all.pipeline.config.context.ExecutionContext attribute) (nirs4all.pipeline.config.ExecutionContext attribute) selector_config (nirs4all.controllers.models.stacking.MetaModelArtifact attribute), [1] (nirs4all.controllers.models.stacking.serialization.MetaModelArtifact attribute), [1] SelectorFactory (class in nirs4all.operators.models) (class in nirs4all.operators.models.selection) senseen_set() (in module nirs4all.operators.transforms) (in module nirs4all.operators.transforms.presets) SensorConfig (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.instruments) sensors (nirs4all.data.synthetic.instruments.MultiSensorConfig attribute), [1] (nirs4all.data.synthetic.MultiSensorConfig attribute), [1] SEPARATE (nirs4all.data.schema.config.VariationMode attribute) (nirs4all.data.schema.VariationMode attribute) (nirs4all.operators.data.AggregationStrategy attribute), [1] (nirs4all.operators.data.merge.AggregationStrategy attribute), [1] separation (nirs4all.data.synthetic.ClassSeparationConfig attribute), [1] (nirs4all.data.synthetic.targets.ClassSeparationConfig attribute), [1] separator (nirs4all.data.synthetic.ExportConfig attribute), [1] (nirs4all.data.synthetic.exporter.ExportConfig attribute), [1] separator_heavy (nirs4all.core.logging.formatters.Symbols property) (nirs4all.core.logging.Symbols property) separator_light (nirs4all.core.logging.formatters.Symbols property) (nirs4all.core.logging.Symbols property) SERIALIZATION_OPERATORS (nirs4all.pipeline.steps.parser.StepParser attribute) (nirs4all.pipeline.steps.StepParser attribute) SerializationFormat (class in nirs4all.data.serialization.serializer) serialize_component() (in module nirs4all.pipeline.config) (in module nirs4all.pipeline.config.component_serialization) serialize_config() (in module nirs4all.data.serialization) (in module nirs4all.data.serialization.serializer) SERIALIZED (nirs4all.pipeline.steps.parser.StepType attribute) Session (class in nirs4all) (class in nirs4all.api) (class in nirs4all.api.session) session() (in module nirs4all) (in module nirs4all.api) (in module nirs4all.api.session) set() (nirs4all.data.performance.cache.DataCache method) (nirs4all.data.performance.DataCache method) set_aggregate() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.SpectroDataset method) set_aggregate_exclude_outliers() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.SpectroDataset method) set_aggregate_method() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.SpectroDataset method) set_cache_size() (nirs4all.pipeline.storage.artifacts.artifact_loader.ArtifactLoader method) (nirs4all.pipeline.storage.artifacts.ArtifactLoader method) set_description() (nirs4all.core.logging.progress.ProgressBar method) (nirs4all.core.logging.ProgressBar method) set_fit_request() (nirs4all.operators.transforms.CARS method) (nirs4all.operators.transforms.feature_selection.CARS method) (nirs4all.operators.transforms.feature_selection.MCUVE method) (nirs4all.operators.transforms.MCUVE method) (nirs4all.operators.transforms.Resampler method) (nirs4all.operators.transforms.resampler.Resampler method) set_folds() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.SpectroDataset method) set_headers() (nirs4all.data.FeatureSource method) set_model() (nirs4all.pipeline.ExtractedPipeline method) (nirs4all.pipeline.retrainer.ExtractedPipeline method) set_model_step() (nirs4all.pipeline.ExecutionTrace method) (nirs4all.pipeline.trace.execution_trace.ExecutionTrace method) (nirs4all.pipeline.trace.ExecutionTrace method) set_params() (nirs4all.operators.models.base.BaseModelOperator method) (nirs4all.operators.models.BaseModelOperator method) (nirs4all.operators.models.DiPLS method) (nirs4all.operators.models.FCKPLS method) (nirs4all.operators.models.IKPLS method) (nirs4all.operators.models.IntervalPLS method) (nirs4all.operators.models.KernelPLS method) (nirs4all.operators.models.KOPLS method) (nirs4all.operators.models.LWPLS method) (nirs4all.operators.models.MBPLS method) (nirs4all.operators.models.meta.MetaModel method) (nirs4all.operators.models.MetaModel method) (nirs4all.operators.models.OKLMPLS method) (nirs4all.operators.models.OPLS method) (nirs4all.operators.models.OPLSDA method) (nirs4all.operators.models.PLSDA method) (nirs4all.operators.models.RecursivePLS method) (nirs4all.operators.models.RobustPLS method) (nirs4all.operators.models.SIMPLS method) (nirs4all.operators.models.sklearn.DiPLS method) (nirs4all.operators.models.sklearn.dipls.DiPLS method) (nirs4all.operators.models.sklearn.FCKPLS method) (nirs4all.operators.models.sklearn.fckpls.FCKPLS method) (nirs4all.operators.models.sklearn.IKPLS method) (nirs4all.operators.models.sklearn.ikpls.IKPLS method) (nirs4all.operators.models.sklearn.IntervalPLS method) (nirs4all.operators.models.sklearn.ipls.IntervalPLS method) (nirs4all.operators.models.sklearn.KernelPLS method) (nirs4all.operators.models.sklearn.KOPLS method) (nirs4all.operators.models.sklearn.kopls.KOPLS method) (nirs4all.operators.models.sklearn.LWPLS method) (nirs4all.operators.models.sklearn.lwpls.LWPLS method) (nirs4all.operators.models.sklearn.MBPLS method) (nirs4all.operators.models.sklearn.mbpls.MBPLS method) (nirs4all.operators.models.sklearn.nlpls.KernelPLS method) (nirs4all.operators.models.sklearn.OKLMPLS method) (nirs4all.operators.models.sklearn.oklmpls.OKLMPLS method) (nirs4all.operators.models.sklearn.OPLS method) (nirs4all.operators.models.sklearn.opls.OPLS method) (nirs4all.operators.models.sklearn.OPLSDA method) (nirs4all.operators.models.sklearn.oplsda.OPLSDA method) (nirs4all.operators.models.sklearn.PLSDA method) (nirs4all.operators.models.sklearn.plsda.PLSDA method) (nirs4all.operators.models.sklearn.recursive_pls.RecursivePLS method) (nirs4all.operators.models.sklearn.RecursivePLS method) (nirs4all.operators.models.sklearn.robust_pls.RobustPLS method) (nirs4all.operators.models.sklearn.RobustPLS method) (nirs4all.operators.models.sklearn.SIMPLS method) (nirs4all.operators.models.sklearn.simpls.SIMPLS method) (nirs4all.operators.models.sklearn.SparsePLS method) (nirs4all.operators.models.sklearn.sparsepls.SparsePLS method) (nirs4all.operators.models.SparsePLS method) (nirs4all.operators.transforms.nirs.PyBaselineCorrection method) (nirs4all.operators.transforms.PyBaselineCorrection method) (nirs4all.operators.transforms.RangeDiscretizer method) (nirs4all.operators.transforms.targets.RangeDiscretizer method) (nirs4all.sklearn.NIRSPipeline method) (nirs4all.sklearn.pipeline.NIRSPipeline method) set_postfix() (nirs4all.core.logging.progress.ProgressBar method) (nirs4all.core.logging.ProgressBar method) set_predict_request() (nirs4all.operators.models.IKPLS method) (nirs4all.operators.models.KernelPLS method) (nirs4all.operators.models.LWPLS method) (nirs4all.operators.models.RobustPLS method) (nirs4all.operators.models.SIMPLS method) (nirs4all.operators.models.sklearn.IKPLS method) (nirs4all.operators.models.sklearn.ikpls.IKPLS method) (nirs4all.operators.models.sklearn.KernelPLS method) (nirs4all.operators.models.sklearn.LWPLS method) (nirs4all.operators.models.sklearn.lwpls.LWPLS method) (nirs4all.operators.models.sklearn.nlpls.KernelPLS method) (nirs4all.operators.models.sklearn.robust_pls.RobustPLS method) (nirs4all.operators.models.sklearn.RobustPLS method) (nirs4all.operators.models.sklearn.SIMPLS method) (nirs4all.operators.models.sklearn.simpls.SIMPLS method) set_run_id() (nirs4all.core.logging.formatters.JsonFormatter method) (nirs4all.core.logging.JsonFormatter method) set_run_start() (nirs4all.core.logging.ConsoleFormatter method) (nirs4all.core.logging.formatters.ConsoleFormatter method) set_score_request() (nirs4all.operators.models.DiPLS method) (nirs4all.operators.models.FCKPLS method) (nirs4all.operators.models.IKPLS method) (nirs4all.operators.models.IntervalPLS method) (nirs4all.operators.models.KernelPLS method) (nirs4all.operators.models.KOPLS method) (nirs4all.operators.models.LWPLS method) (nirs4all.operators.models.MBPLS method) (nirs4all.operators.models.OKLMPLS method) (nirs4all.operators.models.OPLS method) (nirs4all.operators.models.OPLSDA method) (nirs4all.operators.models.PLSDA method) (nirs4all.operators.models.RecursivePLS method) (nirs4all.operators.models.RobustPLS method) (nirs4all.operators.models.SIMPLS method) (nirs4all.operators.models.sklearn.DiPLS method) (nirs4all.operators.models.sklearn.dipls.DiPLS method) (nirs4all.operators.models.sklearn.FCKPLS method) (nirs4all.operators.models.sklearn.fckpls.FCKPLS method) (nirs4all.operators.models.sklearn.IKPLS method) (nirs4all.operators.models.sklearn.ikpls.IKPLS method) (nirs4all.operators.models.sklearn.IntervalPLS method) (nirs4all.operators.models.sklearn.ipls.IntervalPLS method) (nirs4all.operators.models.sklearn.KernelPLS method) (nirs4all.operators.models.sklearn.KOPLS method) (nirs4all.operators.models.sklearn.kopls.KOPLS method) (nirs4all.operators.models.sklearn.LWPLS method) (nirs4all.operators.models.sklearn.lwpls.LWPLS method) (nirs4all.operators.models.sklearn.MBPLS method) (nirs4all.operators.models.sklearn.mbpls.MBPLS method) (nirs4all.operators.models.sklearn.nlpls.KernelPLS method) (nirs4all.operators.models.sklearn.OKLMPLS method) (nirs4all.operators.models.sklearn.oklmpls.OKLMPLS method) (nirs4all.operators.models.sklearn.OPLS method) (nirs4all.operators.models.sklearn.opls.OPLS method) (nirs4all.operators.models.sklearn.OPLSDA method) (nirs4all.operators.models.sklearn.oplsda.OPLSDA method) (nirs4all.operators.models.sklearn.PLSDA method) (nirs4all.operators.models.sklearn.plsda.PLSDA method) (nirs4all.operators.models.sklearn.recursive_pls.RecursivePLS method) (nirs4all.operators.models.sklearn.RecursivePLS method) (nirs4all.operators.models.sklearn.robust_pls.RobustPLS method) (nirs4all.operators.models.sklearn.RobustPLS method) (nirs4all.operators.models.sklearn.SIMPLS method) (nirs4all.operators.models.sklearn.simpls.SIMPLS method) (nirs4all.operators.models.sklearn.SparsePLS method) (nirs4all.operators.models.sklearn.sparsepls.SparsePLS method) (nirs4all.operators.models.SparsePLS method) set_signal_type() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.SpectroDataset method) set_step() (nirs4all.pipeline.ExtractedPipeline method) (nirs4all.pipeline.retrainer.ExtractedPipeline method) set_task_type() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.SpectroDataset method) (nirs4all.data.targets.Targets method) set_transform_request() (nirs4all.operators.Derivate method) (nirs4all.operators.Detrend method) (nirs4all.operators.Gaussian method) (nirs4all.operators.Haar method) (nirs4all.operators.SavitzkyGolay method) (nirs4all.operators.transforms.AirPLS method) (nirs4all.operators.transforms.ArPLS method) (nirs4all.operators.transforms.ASLSBaseline method) (nirs4all.operators.transforms.BEADS method) (nirs4all.operators.transforms.Derivate method) (nirs4all.operators.transforms.Detrend method) (nirs4all.operators.transforms.FirstDerivative method) (nirs4all.operators.transforms.Gaussian method) (nirs4all.operators.transforms.Haar method) (nirs4all.operators.transforms.IASLS method) (nirs4all.operators.transforms.IModPoly method) (nirs4all.operators.transforms.LogTransform method) (nirs4all.operators.transforms.ModPoly method) (nirs4all.operators.transforms.nirs.AirPLS method) (nirs4all.operators.transforms.nirs.AreaNormalization method) (nirs4all.operators.transforms.nirs.ArPLS method) (nirs4all.operators.transforms.nirs.ASLSBaseline method) (nirs4all.operators.transforms.nirs.BEADS method) (nirs4all.operators.transforms.nirs.FirstDerivative method) (nirs4all.operators.transforms.nirs.Haar method) (nirs4all.operators.transforms.nirs.IASLS method) (nirs4all.operators.transforms.nirs.IModPoly method) (nirs4all.operators.transforms.nirs.LogTransform method) (nirs4all.operators.transforms.nirs.ModPoly method) (nirs4all.operators.transforms.nirs.PyBaselineCorrection method) (nirs4all.operators.transforms.nirs.ReflectanceToAbsorbance method) (nirs4all.operators.transforms.nirs.RollingBall method) (nirs4all.operators.transforms.nirs.SavitzkyGolay method) (nirs4all.operators.transforms.nirs.SecondDerivative method) (nirs4all.operators.transforms.nirs.SNIP method) (nirs4all.operators.transforms.nirs.Wavelet method) (nirs4all.operators.transforms.nirs.WaveletFeatures method) (nirs4all.operators.transforms.nirs.WaveletPCA method) (nirs4all.operators.transforms.nirs.WaveletSVD method) (nirs4all.operators.transforms.PyBaselineCorrection method) (nirs4all.operators.transforms.ReflectanceToAbsorbance method) (nirs4all.operators.transforms.RollingBall method) (nirs4all.operators.transforms.SavitzkyGolay method) (nirs4all.operators.transforms.scalers.Derivate method) (nirs4all.operators.transforms.SecondDerivative method) (nirs4all.operators.transforms.signal.Detrend method) (nirs4all.operators.transforms.signal.Gaussian method) (nirs4all.operators.transforms.SNIP method) (nirs4all.operators.transforms.Wavelet method) (nirs4all.operators.transforms.WaveletFeatures method) (nirs4all.operators.transforms.WaveletPCA method) (nirs4all.operators.transforms.WaveletSVD method) (nirs4all.operators.Wavelet method) severity (nirs4all.data.schema.validation.DiagnosticMessage property) (nirs4all.data.schema.validation.error_codes.DiagnosticMessage property) (nirs4all.data.schema.validation.error_codes.ErrorCode attribute), [1] (nirs4all.data.schema.validation.ErrorCode attribute), [1] (nirs4all.pipeline.config.generator.ValidationError attribute), [1] shap_model (nirs4all.sklearn.NIRSPipeline property) (nirs4all.sklearn.pipeline.NIRSPipeline property) shap_values (nirs4all.api.ExplainResult attribute), [1] (nirs4all.api.result.ExplainResult attribute), [1] (nirs4all.ExplainResult attribute), [1] ShapAnalyzer (class in nirs4all.visualization.analysis) (class in nirs4all.visualization.analysis.shap) shape (nirs4all.api.ExplainResult property) (nirs4all.api.PredictResult property) (nirs4all.api.result.ExplainResult property) (nirs4all.api.result.PredictResult property) (nirs4all.data.performance.lazy_loader.LazyArray property) (nirs4all.data.performance.LazyArray property) (nirs4all.ExplainResult property) (nirs4all.PredictResult property) shape_after (nirs4all.visualization.pipeline_diagram.PipelineNode attribute), [1] shape_before (nirs4all.visualization.pipeline_diagram.PipelineNode attribute), [1] ShapeMismatchStrategy (class in nirs4all.operators.data) (class in nirs4all.operators.data.merge) shared_metadata (nirs4all.data.DatasetConfigSchema attribute) (nirs4all.data.schema.config.DatasetConfigSchema attribute) (nirs4all.data.schema.DatasetConfigSchema attribute) shared_targets (nirs4all.data.DatasetConfigSchema attribute) (nirs4all.data.schema.config.DatasetConfigSchema attribute) (nirs4all.data.schema.DatasetConfigSchema attribute) SharedMetadataConfig (class in nirs4all.data.schema) (class in nirs4all.data.schema.config) SharedTargetsConfig (class in nirs4all.data.schema) (class in nirs4all.data.schema.config) shift_per_degree (nirs4all.data.synthetic.environmental.TemperatureEffectParams attribute), [1] (nirs4all.data.synthetic.TemperatureEffectParams attribute), [1] short_cutoff (nirs4all.data.synthetic.detectors.DetectorSpectralResponse attribute), [1] (nirs4all.data.synthetic.DetectorSpectralResponse attribute), [1] short_hash (nirs4all.pipeline.storage.artifacts.ArtifactRecord property) (nirs4all.pipeline.storage.artifacts.types.ArtifactRecord property) short_preprocessings_str() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.SpectroDataset method) shot_noise_enabled (nirs4all.data.synthetic.detectors.NoiseModelConfig attribute), [1] (nirs4all.data.synthetic.NoiseModelConfig attribute), [1] shot_noise_factor (nirs4all.data.synthetic.detectors.NoiseModelConfig attribute), [1] (nirs4all.data.synthetic.NoiseModelConfig attribute), [1] should_invert_x_axis() (in module nirs4all.utils) (in module nirs4all.utils.header_units) should_train_step() (nirs4all.pipeline.config.context.RuntimeContext method) (nirs4all.pipeline.config.RuntimeContext method) (nirs4all.pipeline.RetrainConfig method) (nirs4all.pipeline.retrainer.RetrainConfig method) show_count (nirs4all.core.logging.progress.ProgressConfig attribute), [1] (nirs4all.core.logging.ProgressConfig attribute), [1] show_elapsed (nirs4all.core.logging.progress.ProgressConfig attribute), [1] (nirs4all.core.logging.ProgressConfig attribute), [1] show_eta (nirs4all.core.logging.progress.ProgressConfig attribute), [1] (nirs4all.core.logging.ProgressConfig attribute), [1] show_percentage (nirs4all.core.logging.progress.ProgressConfig attribute), [1] (nirs4all.core.logging.ProgressConfig attribute), [1] show_rate (nirs4all.core.logging.progress.ProgressConfig attribute), [1] (nirs4all.core.logging.ProgressConfig attribute), [1] show_spinner (nirs4all.pipeline.PipelineRunner attribute) (nirs4all.pipeline.runner.PipelineRunner attribute) (nirs4all.PipelineRunner attribute) shuffle (nirs4all.data.PartitionConfig attribute) (nirs4all.data.schema.config.PartitionConfig attribute) (nirs4all.data.schema.PartitionConfig attribute) (nirs4all.data.synthetic.builder.BuilderState attribute) (nirs4all.data.synthetic.config.PartitionConfig attribute), [1] (nirs4all.data.synthetic.PartitionConfig attribute), [1] SI (nirs4all.data.synthetic.DetectorType attribute) (nirs4all.data.synthetic.instruments.DetectorType attribute) sigma (nirs4all.data.synthetic.components.NIRBand attribute), [1] (nirs4all.data.synthetic.NIRBand attribute), [1] signal_score (nirs4all.analysis.results.TransferResult attribute), [1] (nirs4all.analysis.TransferResult attribute), [1] signal_to_confound_ratio (nirs4all.data.synthetic.builder.BuilderState attribute) (nirs4all.data.synthetic.config.ConfounderConfig attribute), [1] (nirs4all.data.synthetic.targets.NonLinearTargetConfig attribute), [1] signal_type (nirs4all.data.detection.DetectionResult attribute), [1] (nirs4all.data.detection.detector.DetectionResult attribute), [1] (nirs4all.data.LoadingParams attribute) (nirs4all.data.schema.config.LoadingParams attribute) (nirs4all.data.schema.LoadingParams attribute) signal_type() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.SpectroDataset method) SIGNAL_TYPE_PATTERNS (nirs4all.data.detection.AutoDetector attribute) (nirs4all.data.detection.detector.AutoDetector attribute) signal_types (nirs4all.data.dataset.SpectroDataset property) (nirs4all.data.SpectroDataset property) SignalType (class in nirs4all.data) (class in nirs4all.data.signal_type) SignalTypeConverter (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.signal_conversion) SignalTypeDetector (class in nirs4all.data) (class in nirs4all.data.signal_type) SignalTypeEnum (class in nirs4all.data.schema) (class in nirs4all.data.schema.config) SimpleScale (class in nirs4all.operators) (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.scalers) SIMPLS (class in nirs4all.operators.models) (class in nirs4all.operators.models.sklearn) (class in nirs4all.operators.models.sklearn.simpls) simulate_detector_effects() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.detectors)

simulate_msc_correctable_scatter() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.scattering) simulate_snv_correctable_scatter() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.scattering) simulate_temperature_series() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.environmental) SimulationSaver (class in nirs4all.pipeline.storage) (class in nirs4all.pipeline.storage.io) sin (nirs4all.data.synthetic.accelerated.AcceleratedArrays attribute) (nirs4all.data.synthetic.AcceleratedArrays attribute) SINGLE (nirs4all.pipeline.FoldStrategy attribute), [1] (nirs4all.pipeline.resolver.FoldStrategy attribute), [1] size (nirs4all.pipeline.storage.artifacts.artifact_loader.LRUCache property) (nirs4all.pipeline.storage.artifacts.artifact_persistence.ArtifactMeta attribute) size_bytes (nirs4all.data.performance.cache.CacheEntry attribute), [1] (nirs4all.data.performance.CacheEntry attribute), [1] (nirs4all.pipeline.storage.artifacts.ArtifactRecord attribute), [1] (nirs4all.pipeline.storage.artifacts.types.ArtifactRecord attribute), [1] size_effect_strength (nirs4all.data.synthetic.ParticleSizeConfig attribute), [1] (nirs4all.data.synthetic.scattering.ParticleSizeConfig attribute), [1] skewness (nirs4all.data.synthetic.fitter.SpectralProperties attribute), [1] (nirs4all.data.synthetic.SpectralProperties attribute), [1] SKIP (nirs4all.core.logging.events.EventType attribute) (nirs4all.core.logging.EventType attribute) (nirs4all.pipeline.trace.execution_trace.StepExecutionMode attribute), [1] (nirs4all.pipeline.trace.StepExecutionMode attribute), [1] SKIPPED (nirs4all.core.logging.events.Status attribute) skipped (nirs4all.core.logging.formatters.Symbols property) SKIPPED (nirs4all.core.logging.Status attribute) skipped (nirs4all.core.logging.Symbols property) SKLEARN_SCORING (nirs4all.controllers.models.utilities.ModelControllerUtils attribute) SklearnModelController (class in nirs4all.controllers) (class in nirs4all.controllers.models) (class in nirs4all.controllers.models.sklearn_model) slope_std (nirs4all.data.synthetic.fitter.SpectralProperties attribute), [1] (nirs4all.data.synthetic.SpectralProperties attribute), [1] slopes (nirs4all.data.synthetic.fitter.SpectralProperties attribute) (nirs4all.data.synthetic.SpectralProperties attribute) SLURRY (nirs4all.data.synthetic.MatrixType attribute) (nirs4all.data.synthetic.prior.MatrixType attribute) small_set() (in module nirs4all.operators.transforms) (in module nirs4all.operators.transforms.presets) SmoothMagnitudeWarp (class in nirs4all.operators.transforms) SNIP (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.nirs) snr (nirs4all.data.synthetic.InstrumentArchetype attribute), [1] (nirs4all.data.synthetic.instruments.InstrumentArchetype attribute), [1] SNR_DISTRIBUTION (nirs4all.data.synthetic.RealismMetric attribute) (nirs4all.data.synthetic.validation.RealismMetric attribute) snr_estimate (nirs4all.data.synthetic.fitter.SpectralProperties attribute), [1] (nirs4all.data.synthetic.SpectralProperties attribute), [1] snr_magnitude_match (nirs4all.data.synthetic.SpectralRealismScore attribute), [1] (nirs4all.data.synthetic.validation.SpectralRealismScore attribute), [1] snv_correctable (nirs4all.data.synthetic.fitter.ScatteringInference attribute), [1] (nirs4all.data.synthetic.ScatteringInference attribute), [1] software (nirs4all.data.schema.config.PreprocessingApplied attribute) (nirs4all.data.schema.PreprocessingApplied attribute) SOLID (nirs4all.data.synthetic.MatrixType attribute) (nirs4all.data.synthetic.prior.MatrixType attribute) SOURCE (nirs4all.core.logging.events.Phase attribute) (nirs4all.core.logging.Phase attribute) source() (nirs4all.core.logging.context.LogContext static method) (nirs4all.core.logging.LogContext static method) SOURCE_CONCAT (nirs4all.core.logging.events.EventType attribute) (nirs4all.core.logging.EventType attribute) source_configs (nirs4all.data.synthetic.MultiSourceResult attribute), [1] (nirs4all.data.synthetic.sources.MultiSourceResult attribute), [1] source_context (nirs4all.core.logging.context.RunState attribute), [1] (nirs4all.core.logging.RunState attribute), [1] source_count (nirs4all.pipeline.ExecutionStep attribute), [1] (nirs4all.pipeline.trace.execution_trace.ExecutionStep attribute), [1] (nirs4all.pipeline.trace.ExecutionStep attribute), [1] source_filter_hint (nirs4all.controllers.models.stacking.branch_validator.BranchValidationResult attribute) (nirs4all.controllers.models.stacking.BranchValidationResult attribute) source_index (nirs4all.core.logging.events.LogEvent attribute), [1] (nirs4all.core.logging.LogEvent attribute), [1] (nirs4all.pipeline.storage.artifacts.ArtifactRecord attribute), [1] (nirs4all.pipeline.storage.artifacts.ExecutionPath attribute), [1] (nirs4all.pipeline.storage.artifacts.operator_chain.OperatorNode attribute), [1] (nirs4all.pipeline.storage.artifacts.OperatorNode attribute), [1] (nirs4all.pipeline.storage.artifacts.types.ArtifactRecord attribute), [1] (nirs4all.pipeline.storage.artifacts.utils.ExecutionPath attribute), [1] source_levels (nirs4all.controllers.models.stacking.LevelValidationResult attribute), [1] (nirs4all.controllers.models.stacking.multilevel.LevelValidationResult attribute), [1] source_model (nirs4all.controllers.models.stacking.CircularDependencyError attribute) (nirs4all.controllers.models.stacking.DisjointSampleSetsError attribute) (nirs4all.controllers.models.stacking.exceptions.CircularDependencyError attribute) (nirs4all.controllers.models.stacking.exceptions.DisjointSampleSetsError attribute) source_model_id (nirs4all.controllers.models.stacking.exceptions.MissingSourceModelError attribute) (nirs4all.controllers.models.stacking.exceptions.SourcePredictionError attribute) (nirs4all.controllers.models.stacking.MissingSourceModelError attribute) (nirs4all.controllers.models.stacking.SourcePredictionError attribute) source_model_name (nirs4all.controllers.models.stacking.exceptions.SourcePredictionError attribute) (nirs4all.controllers.models.stacking.SourcePredictionError attribute) source_model_names (nirs4all.controllers.models.stacking.reconstructor.TrainingSetReconstructor attribute) (nirs4all.controllers.models.stacking.TrainingSetReconstructor attribute) (nirs4all.controllers.models.TrainingSetReconstructor attribute) source_models (nirs4all.controllers.models.ReconstructionResult attribute), [1] (nirs4all.controllers.models.stacking.classification.MetaFeatureInfo attribute), [1] (nirs4all.controllers.models.stacking.exceptions.MaxStackingLevelExceededError attribute) (nirs4all.controllers.models.stacking.MaxStackingLevelExceededError attribute) (nirs4all.controllers.models.stacking.MetaFeatureInfo attribute), [1] (nirs4all.controllers.models.stacking.MetaModelArtifact attribute), [1] (nirs4all.controllers.models.stacking.ModelLevelInfo attribute), [1] (nirs4all.controllers.models.stacking.multilevel.ModelLevelInfo attribute), [1] (nirs4all.controllers.models.stacking.ReconstructionResult attribute), [1] (nirs4all.controllers.models.stacking.reconstructor.ReconstructionResult attribute), [1] (nirs4all.controllers.models.stacking.serialization.MetaModelArtifact attribute), [1] (nirs4all.operators.models.meta.MetaModel attribute) (nirs4all.operators.models.MetaModel attribute) (nirs4all.pipeline.storage.artifacts.MetaModelConfig attribute), [1] (nirs4all.pipeline.storage.artifacts.types.MetaModelConfig attribute), [1] source_mtime (nirs4all.data.performance.cache.CacheEntry attribute), [1] (nirs4all.data.performance.CacheEntry attribute), [1] source_name (nirs4all.core.logging.events.LogEvent attribute), [1] (nirs4all.core.logging.LogEvent attribute), [1] (nirs4all.data.synthetic.FittedParameters attribute), [1] (nirs4all.data.synthetic.fitter.FittedParameters attribute), [1] source_names (nirs4all.data.synthetic.MultiSourceResult property) (nirs4all.data.synthetic.sources.MultiSourceResult property) (nirs4all.operators.data.merge.MergeConfig attribute), [1] (nirs4all.operators.data.MergeConfig attribute), [1] (nirs4all.operators.data.repetition.RepetitionConfig attribute), [1] (nirs4all.operators.data.RepetitionConfig attribute), [1] source_path (nirs4all.data.performance.cache.CacheEntry attribute), [1] (nirs4all.data.performance.CacheEntry attribute), [1] source_pipeline_uid (nirs4all.pipeline.ExtractedPipeline attribute), [1] (nirs4all.pipeline.retrainer.ExtractedPipeline attribute), [1] source_pipelines (nirs4all.operators.data.merge.SourceBranchConfig attribute), [1] SOURCE_PROCESS (nirs4all.core.logging.events.EventType attribute) (nirs4all.core.logging.EventType attribute) source_properties (nirs4all.data.synthetic.FittedParameters attribute), [1] (nirs4all.data.synthetic.fitter.FittedParameters attribute), [1] (nirs4all.data.synthetic.fitter.RealDataFitter attribute) (nirs4all.data.synthetic.RealDataFitter attribute) source_type (nirs4all.data.parsers.base.ParserResult attribute), [1] (nirs4all.data.parsers.ParserResult attribute), [1] (nirs4all.data.synthetic.SourceConfig attribute), [1] (nirs4all.data.synthetic.sources.SourceConfig attribute), [1] (nirs4all.pipeline.bundle.BundleMetadata attribute), [1] (nirs4all.pipeline.bundle.loader.BundleMetadata attribute), [1] (nirs4all.pipeline.BundleMetadata attribute), [1] (nirs4all.pipeline.ResolvedPrediction attribute), [1] (nirs4all.pipeline.resolver.ResolvedPrediction attribute), [1] source_type_ (nirs4all.operators.transforms.signal_conversion.ToAbsorbance attribute) (nirs4all.operators.transforms.ToAbsorbance attribute) source_url (nirs4all.data.synthetic.BenchmarkDatasetInfo attribute), [1] (nirs4all.data.synthetic.benchmarks.BenchmarkDatasetInfo attribute), [1] SourceBranchConfig (class in nirs4all.operators.data.merge) SourceBranchConfigParser (class in nirs4all.controllers.data) (class in nirs4all.controllers.data.source_branch) SourceBranchController (class in nirs4all.controllers.data) (class in nirs4all.controllers.data.source_branch) SourceConfig (class in nirs4all.data.schema) (class in nirs4all.data.schema.config) (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.sources) SourceContext (class in nirs4all.core.logging) (class in nirs4all.core.logging.context) SourceFileConfig (class in nirs4all.data.schema) (class in nirs4all.data.schema.config) SourceIncompatibleStrategy (class in nirs4all.operators.data) (class in nirs4all.operators.data.merge) SourceMergeConfig (class in nirs4all.controllers.data.merge) (class in nirs4all.operators.data) (class in nirs4all.operators.data.merge) SourceMergeStrategy (class in nirs4all.operators.data) (class in nirs4all.operators.data.merge) SourceModelReference (class in nirs4all.controllers.models.stacking) (class in nirs4all.controllers.models.stacking.serialization) SourceModelSelector (class in nirs4all.operators.models) (class in nirs4all.operators.models.selection) SourcePredictionError, [1] sources (nirs4all.controllers.data.merge.SourceMergeConfig attribute), [1] (nirs4all.data.DatasetConfigSchema attribute) (nirs4all.data.features.Features attribute) (nirs4all.data.schema.config.DatasetConfigSchema attribute) (nirs4all.data.schema.DatasetConfigSchema attribute) (nirs4all.data.synthetic.builder.BuilderState attribute) (nirs4all.data.synthetic.MultiSourceResult attribute), [1] (nirs4all.data.synthetic.sources.MultiSourceResult attribute), [1] (nirs4all.operators.data.BranchPredictionConfig attribute), [1] (nirs4all.operators.data.merge.BranchPredictionConfig attribute), [1] (nirs4all.operators.data.merge.SourceMergeConfig attribute), [1] (nirs4all.operators.data.SourceMergeConfig attribute), [1] SourcesParser (class in nirs4all.data.parsers) (class in nirs4all.data.parsers.files_parser) SourceType (class in nirs4all.pipeline) (class in nirs4all.pipeline.resolver) spacer_thickness_mm (nirs4all.data.synthetic.measurement_modes.TransflectanceConfig attribute), [1] (nirs4all.data.synthetic.TransflectanceConfig attribute), [1] SparsePLS (class in nirs4all.operators.models) (class in nirs4all.operators.models.sklearn) (class in nirs4all.operators.models.sklearn.sparsepls) special_set() (in module nirs4all.operators.transforms) (in module nirs4all.operators.transforms.presets) SPECIFIED (nirs4all.operators.models.BranchScope attribute), [1] (nirs4all.operators.models.meta.BranchScope attribute), [1] SpectraChartController (class in nirs4all.controllers) (class in nirs4all.controllers.charts.spectra) spectral_masking (nirs4all.data.synthetic.builder.BuilderState attribute) (nirs4all.data.synthetic.config.ConfounderConfig attribute), [1] (nirs4all.data.synthetic.targets.NonLinearTargetConfig attribute), [1] spectral_resolution (nirs4all.data.synthetic.InstrumentArchetype attribute), [1] (nirs4all.data.synthetic.instruments.InstrumentArchetype attribute), [1] (nirs4all.data.synthetic.instruments.SensorConfig attribute), [1] (nirs4all.data.synthetic.SensorConfig attribute), [1] SpectralComponent (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.components) SpectralDistributionController (class in nirs4all.controllers) (class in nirs4all.controllers.charts.spectral_distribution) SpectralProperties (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.fitter) SpectralQualityFilter (class in nirs4all.operators.filters) (class in nirs4all.operators.filters.spectral_quality) SpectralRealismScore (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.validation) SpectralRegion (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.environmental) SpectroDataset (class in nirs4all.data) (class in nirs4all.data.dataset) specular_fraction (nirs4all.data.synthetic.measurement_modes.MeasurementModeConfig attribute), [1] SpikeNoise (class in nirs4all.operators.transforms) Spinner (class in nirs4all.utils.spinner) spinner() (in module nirs4all.core.logging) (in module nirs4all.core.logging.progress) spinner_context() (in module nirs4all.utils.spinner) SpinnerProgress (class in nirs4all.core.logging) (class in nirs4all.core.logging.progress) spl_norml() (in module nirs4all.operators) (in module nirs4all.operators.transforms) (in module nirs4all.operators.transforms.scalers) Spline_Curve_Simplification (class in nirs4all.operators) (class in nirs4all.operators.transforms) Spline_Smoothing (class in nirs4all.operators) (class in nirs4all.operators.transforms) Spline_X_Perturbations (class in nirs4all.operators) (class in nirs4all.operators.transforms) Spline_X_Simplification (class in nirs4all.operators) (class in nirs4all.operators.transforms) Spline_Y_Perturbations (class in nirs4all.operators) (class in nirs4all.operators.transforms) SPLIT (nirs4all.core.logging.events.Phase attribute) (nirs4all.core.logging.Phase attribute) split() (nirs4all.operators.splitters.BinnedStratifiedGroupKFold method) (nirs4all.operators.splitters.grouped_wrapper.GroupedSplitterWrapper method) (nirs4all.operators.splitters.GroupedSplitterWrapper method) (nirs4all.operators.splitters.KBinsStratifiedSplitter method) (nirs4all.operators.splitters.KennardStoneSplitter method) (nirs4all.operators.splitters.KMeansSplitter method) (nirs4all.operators.splitters.SPlitSplitter method) (nirs4all.operators.splitters.splitters.BinnedStratifiedGroupKFold method) (nirs4all.operators.splitters.splitters.CustomSplitter method) (nirs4all.operators.splitters.splitters.KBinsStratifiedSplitter method) (nirs4all.operators.splitters.splitters.KennardStoneSplitter method) (nirs4all.operators.splitters.splitters.KMeansSplitter method) (nirs4all.operators.splitters.splitters.SPlitSplitter method) (nirs4all.operators.splitters.splitters.SPXYGFold method) (nirs4all.operators.splitters.splitters.SPXYSplitter method) (nirs4all.operators.splitters.splitters.SystematicCircularSplitter method) (nirs4all.operators.splitters.SPXYGFold method) (nirs4all.operators.splitters.SPXYSplitter method) (nirs4all.operators.splitters.SystematicCircularSplitter method) SPlitSplitter (class in nirs4all.operators.splitters) (class in nirs4all.operators.splitters.splitters) SPLITTER (nirs4all.pipeline.storage.artifacts.ArtifactType attribute) (nirs4all.pipeline.storage.artifacts.types.ArtifactType attribute) spread_distance (nirs4all.analysis.transfer_metrics.TransferMetrics attribute) (nirs4all.analysis.TransferMetrics attribute) SPXYGFold (class in nirs4all.operators.splitters) (class in nirs4all.operators.splitters.splitters) SPXYSplitter (class in nirs4all.operators.splitters) (class in nirs4all.operators.splitters.splitters) sqrt (nirs4all.data.synthetic.accelerated.AcceleratedArrays attribute) (nirs4all.data.synthetic.AcceleratedArrays attribute) stability_ (nirs4all.operators.transforms.feature_selection.MCUVE attribute) (nirs4all.operators.transforms.MCUVE attribute) STACK (nirs4all.core.logging.events.Phase attribute) (nirs4all.core.logging.Phase attribute) (nirs4all.operators.data.merge.SourceMergeStrategy attribute), [1] (nirs4all.operators.data.SourceMergeStrategy attribute), [1] stack() (nirs4all.core.logging.context.LogContext static method) (nirs4all.core.logging.LogContext static method) stack_context (nirs4all.core.logging.context.RunState attribute), [1] (nirs4all.core.logging.RunState attribute), [1] StackContext (class in nirs4all.core.logging) (class in nirs4all.core.logging.context) stacking_config (nirs4all.controllers.models.stacking.MetaModelArtifact attribute), [1] (nirs4all.controllers.models.stacking.reconstructor.TrainingSetReconstructor attribute) (nirs4all.controllers.models.stacking.serialization.MetaModelArtifact attribute), [1] (nirs4all.controllers.models.stacking.TrainingSetReconstructor attribute) (nirs4all.controllers.models.TrainingSetReconstructor attribute) (nirs4all.operators.models.meta.MetaModel attribute) (nirs4all.operators.models.MetaModel attribute) stacking_config_from_dict() (in module nirs4all.controllers.models.stacking) (in module nirs4all.controllers.models.stacking.serialization) stacking_config_to_dict() (in module nirs4all.controllers.models.stacking) (in module nirs4all.controllers.models.stacking.serialization) StackingCompatibility (class in nirs4all.controllers.models.stacking) (class in nirs4all.controllers.models.stacking.branch_validator) StackingConfig (class in nirs4all.operators.models) (class in nirs4all.operators.models.meta) StackingLevel (class in nirs4all.operators.models) (class in nirs4all.operators.models.meta) StackingTaskType (class in nirs4all.controllers.models.stacking) (class in nirs4all.controllers.models.stacking.classification) StandardNormalVariate (class in nirs4all.operators) (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.scalers) START (nirs4all.core.logging.events.EventType attribute) (nirs4all.core.logging.EventType attribute) start() (nirs4all.core.logging.progress.ProgressBar method) (nirs4all.core.logging.progress.SpinnerProgress method) (nirs4all.core.logging.ProgressBar method) (nirs4all.core.logging.SpinnerProgress method) (nirs4all.utils.spinner.Spinner method) start_branch_step() (nirs4all.pipeline.trace.recorder.TraceRecorder method) (nirs4all.pipeline.trace.TraceRecorder method) (nirs4all.pipeline.TraceRecorder method) start_branch_substep() (nirs4all.pipeline.trace.recorder.TraceRecorder method) (nirs4all.pipeline.trace.TraceRecorder method) (nirs4all.pipeline.TraceRecorder method) start_run() (nirs4all.pipeline.storage.artifacts.artifact_registry.ArtifactRegistry method) (nirs4all.pipeline.storage.artifacts.ArtifactRegistry method) start_step() (nirs4all.pipeline.trace.recorder.TraceRecorder method) (nirs4all.pipeline.trace.TraceRecorder method) (nirs4all.pipeline.TraceRecorder method) start_time (nirs4all.core.logging.context.RunState attribute), [1] (nirs4all.core.logging.RunState attribute), [1] STARTING (nirs4all.core.logging.events.Status attribute) starting (nirs4all.core.logging.formatters.Symbols property) STARTING (nirs4all.core.logging.Status attribute) starting (nirs4all.core.logging.Symbols property) starting() (nirs4all.core.logging.config.Nirs4allLogger method) (nirs4all.core.logging.Nirs4allLogger method) state (nirs4all.data.synthetic.builder.SyntheticDatasetBuilder attribute) (nirs4all.data.synthetic.SyntheticDatasetBuilder attribute) (nirs4all.pipeline.config.context.ExecutionContext attribute) (nirs4all.pipeline.config.ExecutionContext attribute) stats (nirs4all.operators.filters.FilterResult attribute), [1] (nirs4all.operators.filters.report.FilterResult attribute), [1] (nirs4all.pipeline.storage.artifacts.artifact_loader.LRUCache property) stats() (nirs4all.data.performance.cache.DataCache method) (nirs4all.data.performance.DataCache method) Status (class in nirs4all.core.logging) (class in nirs4all.core.logging.events) status (nirs4all.api.Session attribute) (nirs4all.api.Session property) (nirs4all.api.session.Session attribute) (nirs4all.api.session.Session property) (nirs4all.core.logging.events.LogEvent attribute), [1] (nirs4all.core.logging.LogEvent attribute), [1] (nirs4all.Session attribute) (nirs4all.Session property) STD (nirs4all.data.aggregation.AggregationMethod attribute) (nirs4all.data.aggregation.aggregator.AggregationMethod attribute) std_coefs_ (nirs4all.operators.transforms.feature_selection.MCUVE attribute) (nirs4all.operators.transforms.MCUVE attribute) std_size_um (nirs4all.data.synthetic.ParticleSizeDistribution attribute), [1] (nirs4all.data.synthetic.scattering.ParticleSizeDistribution attribute), [1] std_spectrum (nirs4all.data.synthetic.fitter.SpectralProperties attribute), [1] (nirs4all.data.synthetic.SpectralProperties attribute), [1] STEP (nirs4all.core.logging.events.EventType attribute) (nirs4all.core.logging.EventType attribute) step (nirs4all.pipeline.storage.artifacts.artifact_persistence.ArtifactMeta attribute) step_config (nirs4all.pipeline.MinimalPipelineStep attribute), [1] (nirs4all.pipeline.trace.extractor.MinimalPipelineStep attribute), [1] (nirs4all.pipeline.trace.MinimalPipelineStep attribute), [1] step_id (nirs4all.controllers.models.components.identifier_generator.ModelIdentifiers attribute) (nirs4all.controllers.models.components.ModelIdentifiers attribute) (nirs4all.pipeline.config.context.StepMetadata attribute), [1] (nirs4all.pipeline.config.StepMetadata attribute), [1] step_idx (nirs4all.controllers.models.stacking.ModelLevelInfo attribute), [1] (nirs4all.controllers.models.stacking.multilevel.ModelLevelInfo attribute), [1] (nirs4all.controllers.models.stacking.serialization.SourceModelReference attribute), [1] (nirs4all.controllers.models.stacking.SourceModelReference attribute), [1] (nirs4all.data.PredictionResult property) (nirs4all.data.predictions.PredictionResult property) (nirs4all.operators.models.ModelCandidate attribute), [1] (nirs4all.operators.models.selection.ModelCandidate attribute), [1] step_index (nirs4all.pipeline.ExecutionStep attribute), [1] (nirs4all.pipeline.MinimalPipelineStep attribute), [1] (nirs4all.pipeline.retrainer.StepMode attribute), [1] (nirs4all.pipeline.StepMode attribute), [1] (nirs4all.pipeline.storage.artifacts.ArtifactRecord attribute), [1] (nirs4all.pipeline.storage.artifacts.ExecutionPath attribute), [1] (nirs4all.pipeline.storage.artifacts.operator_chain.OperatorNode attribute), [1] (nirs4all.pipeline.storage.artifacts.OperatorNode attribute), [1] (nirs4all.pipeline.storage.artifacts.types.ArtifactRecord attribute), [1] (nirs4all.pipeline.storage.artifacts.utils.ExecutionPath attribute), [1] (nirs4all.pipeline.trace.execution_trace.ExecutionStep attribute), [1] (nirs4all.pipeline.trace.ExecutionStep attribute), [1] (nirs4all.pipeline.trace.extractor.MinimalPipelineStep attribute), [1] (nirs4all.pipeline.trace.MinimalPipelineStep attribute), [1] (nirs4all.visualization.pipeline_diagram.PipelineNode attribute), [1] step_info (nirs4all.pipeline.bundle.loader.BundleArtifactProvider attribute) step_modes (nirs4all.pipeline.RetrainConfig attribute), [1] (nirs4all.pipeline.retrainer.RetrainConfig attribute), [1] step_number (nirs4all.pipeline.config.context.PipelineState attribute), [1] (nirs4all.pipeline.config.context.RuntimeContext attribute) (nirs4all.pipeline.config.PipelineState attribute), [1] (nirs4all.pipeline.config.RuntimeContext attribute) step_runner (nirs4all.pipeline.config.context.RuntimeContext attribute), [1] (nirs4all.pipeline.config.RuntimeContext attribute), [1] (nirs4all.pipeline.execution.executor.PipelineExecutor attribute) (nirs4all.pipeline.execution.PipelineExecutor attribute) step_start_time (nirs4all.pipeline.trace.recorder.TraceRecorder attribute) (nirs4all.pipeline.trace.TraceRecorder attribute) (nirs4all.pipeline.TraceRecorder attribute) step_type (nirs4all.pipeline.steps.ParsedStep attribute), [1] (nirs4all.pipeline.steps.parser.ParsedStep attribute), [1] StepArtifacts (class in nirs4all.pipeline) (class in nirs4all.pipeline.trace) (class in nirs4all.pipeline.trace.execution_trace) StepExecutionMode (class in nirs4all.pipeline.trace) (class in nirs4all.pipeline.trace.execution_trace) StepMetadata (class in nirs4all.pipeline.config) (class in nirs4all.pipeline.config.context) StepMode (class in nirs4all.pipeline) (class in nirs4all.pipeline.retrainer) StepOutput (class in nirs4all.pipeline.execution.result) StepParser (class in nirs4all.pipeline.steps) (class in nirs4all.pipeline.steps.parser) StepResult (class in nirs4all.pipeline.execution) (class in nirs4all.pipeline.execution.result) StepRunner (class in nirs4all.pipeline.steps) (class in nirs4all.pipeline.steps.step_runner) steps (nirs4all.pipeline.ExecutionTrace attribute), [1] (nirs4all.pipeline.ExtractedPipeline attribute), [1] (nirs4all.pipeline.MinimalPipeline attribute), [1] (nirs4all.pipeline.retrainer.ExtractedPipeline attribute), [1] (nirs4all.pipeline.trace.execution_trace.ExecutionTrace attribute), [1] (nirs4all.pipeline.trace.ExecutionTrace attribute), [1] (nirs4all.pipeline.trace.extractor.MinimalPipeline attribute), [1] (nirs4all.pipeline.trace.MinimalPipeline attribute), [1] StepType (class in nirs4all.pipeline.steps.parser) stitch_method (nirs4all.data.synthetic.instruments.MultiSensorConfig attribute), [1] (nirs4all.data.synthetic.MultiSensorConfig attribute), [1] stitch_smoothing (nirs4all.data.synthetic.instruments.MultiSensorConfig attribute), [1] (nirs4all.data.synthetic.MultiSensorConfig attribute), [1] stop() (nirs4all.core.logging.progress.SpinnerProgress method) (nirs4all.core.logging.SpinnerProgress method) (nirs4all.utils.spinner.Spinner method) strategy (nirs4all.controllers.data.merge.SourceMergeConfig attribute), [1] (nirs4all.operators.data.merge.SourceMergeConfig attribute), [1] (nirs4all.operators.data.SourceMergeConfig attribute), [1] strategy_name (nirs4all.controllers.data.outlier_excluder.OutlierExclusionResult attribute) stratify (nirs4all.data.PartitionConfig attribute) (nirs4all.data.schema.config.PartitionConfig attribute) (nirs4all.data.schema.PartitionConfig attribute) (nirs4all.data.synthetic.builder.BuilderState attribute) (nirs4all.data.synthetic.config.PartitionConfig attribute), [1] (nirs4all.data.synthetic.PartitionConfig attribute), [1] stray_light (nirs4all.data.synthetic.InstrumentArchetype attribute), [1] (nirs4all.data.synthetic.instruments.InstrumentArchetype attribute), [1] STRICT (nirs4all.operators.models.CoverageStrategy attribute), [1] strict (nirs4all.operators.models.ExplicitModelSelector attribute) STRICT (nirs4all.operators.models.meta.CoverageStrategy attribute), [1] strict (nirs4all.operators.models.selection.ExplicitModelSelector attribute) sub_item (nirs4all.core.logging.formatters.Symbols property) (nirs4all.core.logging.Symbols property) SUBPIPELINE (nirs4all.pipeline.steps.parser.StepType attribute) substep_index (nirs4all.pipeline.ExecutionStep attribute), [1] (nirs4all.pipeline.MinimalPipelineStep attribute) (nirs4all.pipeline.storage.artifacts.ArtifactRecord attribute), [1] (nirs4all.pipeline.storage.artifacts.ExecutionPath attribute), [1] (nirs4all.pipeline.storage.artifacts.operator_chain.OperatorNode attribute), [1] (nirs4all.pipeline.storage.artifacts.OperatorNode attribute), [1] (nirs4all.pipeline.storage.artifacts.types.ArtifactRecord attribute), [1] (nirs4all.pipeline.storage.artifacts.utils.ExecutionPath attribute), [1] (nirs4all.pipeline.trace.execution_trace.ExecutionStep attribute), [1] (nirs4all.pipeline.trace.ExecutionStep attribute), [1] (nirs4all.pipeline.trace.extractor.MinimalPipelineStep attribute) (nirs4all.pipeline.trace.MinimalPipelineStep attribute) (nirs4all.visualization.pipeline_diagram.PipelineNode attribute), [1] substep_number (nirs4all.pipeline.config.context.RuntimeContext attribute), [1] (nirs4all.pipeline.config.RuntimeContext attribute), [1] SUCCESS (nirs4all.core.logging.events.Status attribute) success (nirs4all.core.logging.formatters.Symbols property) SUCCESS (nirs4all.core.logging.Status attribute) success (nirs4all.core.logging.Symbols property) (nirs4all.data.loaders.base.LoaderResult property) (nirs4all.data.loaders.LoaderResult property) (nirs4all.data.parsers.base.ParserResult attribute), [1] (nirs4all.data.parsers.ParserResult attribute), [1] success() (nirs4all.core.logging.config.Nirs4allLogger method) (nirs4all.core.logging.Nirs4allLogger method) suggest_mixed_merge() (nirs4all.controllers.data.merge.AsymmetricBranchAnalyzer method) suggested_n_components (nirs4all.data.synthetic.FittedParameters attribute), [1] (nirs4all.data.synthetic.fitter.FittedParameters attribute), [1] suggestion (nirs4all.data.schema.validation.DiagnosticMessage attribute), [1] (nirs4all.data.schema.validation.error_codes.DiagnosticMessage attribute), [1] (nirs4all.data.schema.validation.ValidationError attribute), [1] (nirs4all.data.schema.validation.validators.ValidationError attribute), [1] (nirs4all.data.schema.ValidationError attribute), [1] (nirs4all.data.ValidationError attribute), [1] (nirs4all.pipeline.config.generator.ValidationError attribute), [1] suggestion_template (nirs4all.data.schema.validation.error_codes.ErrorCode attribute), [1] (nirs4all.data.schema.validation.ErrorCode attribute), [1] suggestions (nirs4all.controllers.models.stacking.exceptions.IncompatibleBranchTypeError attribute) (nirs4all.controllers.models.stacking.IncompatibleBranchTypeError attribute) SUM (nirs4all.data.aggregation.AggregationMethod attribute) (nirs4all.data.aggregation.aggregator.AggregationMethod attribute) sum (nirs4all.data.synthetic.accelerated.AcceleratedArrays attribute) (nirs4all.data.synthetic.AcceleratedArrays attribute) summarize_configs() (in module nirs4all.pipeline.config.generator) summary (nirs4all.controllers.data.merge.AsymmetryReport attribute), [1] summary() (nirs4all.analysis.results.TransferSelectionResults method) (nirs4all.analysis.TransferSelectionResults method) (nirs4all.api.result.RunResult method) (nirs4all.api.RunResult method) (nirs4all.data.PredictionResult method) (nirs4all.data.predictions.PredictionResult method) (nirs4all.data.serialization.serializer.ConfigDiff method) (nirs4all.data.synthetic.BenchmarkDatasetInfo method) (nirs4all.data.synthetic.benchmarks.BenchmarkDatasetInfo method) (nirs4all.data.synthetic.DatasetComparisonResult method) (nirs4all.data.synthetic.FittedParameters method) (nirs4all.data.synthetic.fitter.FittedParameters method) (nirs4all.data.synthetic.SpectralRealismScore method) (nirs4all.data.synthetic.validation.DatasetComparisonResult method) (nirs4all.data.synthetic.validation.SpectralRealismScore method) (nirs4all.operators.filters.FilteringReport method) (nirs4all.operators.filters.report.FilteringReport method) (nirs4all.RunResult method) (nirs4all.visualization.analysis.branch.BranchAnalyzer method) (nirs4all.visualization.analysis.BranchAnalyzer method) (nirs4all.visualization.BranchAnalyzer method) SUPPORTED_DISTRIBUTIONS (nirs4all.pipeline.config.generator.SampleStrategy attribute) SUPPORTED_EXTENSIONS (nirs4all.controllers.splitters.fold_file_loader.FoldFileParser attribute) (nirs4all.controllers.splitters.FoldFileParser attribute) supported_extensions (nirs4all.data.loaders.archive_loader.EnhancedZipLoader attribute) (nirs4all.data.loaders.archive_loader.TarLoader attribute) (nirs4all.data.loaders.base.FileLoader attribute) (nirs4all.data.loaders.csv_loader_new.CSVLoader attribute) (nirs4all.data.loaders.CSVLoader attribute) (nirs4all.data.loaders.EnhancedZipLoader attribute) (nirs4all.data.loaders.excel_loader.ExcelLoader attribute) (nirs4all.data.loaders.ExcelLoader attribute) (nirs4all.data.loaders.FileLoader attribute) (nirs4all.data.loaders.matlab_loader.MatlabLoader attribute) (nirs4all.data.loaders.MatlabLoader attribute) (nirs4all.data.loaders.numpy_loader.NumpyLoader attribute) (nirs4all.data.loaders.NumpyLoader attribute) (nirs4all.data.loaders.parquet_loader.ParquetLoader attribute) (nirs4all.data.loaders.ParquetLoader attribute) (nirs4all.data.loaders.TarLoader attribute) SUPPORTED_EXTENSIONS (nirs4all.data.parsers.folder_parser.FolderParser attribute) (nirs4all.data.parsers.FolderParser attribute) SUPPORTED_KEYWORDS (nirs4all.controllers.data.merge.MergeController attribute), [1] (nirs4all.controllers.data.MergeController attribute), [1] supports() (nirs4all.data.loaders.archive_loader.EnhancedZipLoader class method) (nirs4all.data.loaders.archive_loader.TarLoader class method) (nirs4all.data.loaders.base.FileLoader class method) (nirs4all.data.loaders.csv_loader_new.CSVLoader class method) (nirs4all.data.loaders.CSVLoader class method) (nirs4all.data.loaders.EnhancedZipLoader class method) (nirs4all.data.loaders.excel_loader.ExcelLoader class method) (nirs4all.data.loaders.ExcelLoader class method) (nirs4all.data.loaders.FileLoader class method) (nirs4all.data.loaders.matlab_loader.MatlabLoader class method) (nirs4all.data.loaders.MatlabLoader class method) (nirs4all.data.loaders.numpy_loader.NumpyLoader class method) (nirs4all.data.loaders.NumpyLoader class method) (nirs4all.data.loaders.parquet_loader.ParquetLoader class method) (nirs4all.data.loaders.ParquetLoader class method) (nirs4all.data.loaders.TarLoader class method) supports_prediction_mode() (nirs4all.controllers.AugmentationChartController class method) (nirs4all.controllers.AutoTransferPreprocessingController class method) (nirs4all.controllers.BranchController class method) (nirs4all.controllers.charts.augmentation.AugmentationChartController class method) (nirs4all.controllers.charts.exclusion.ExclusionChartController class method) (nirs4all.controllers.charts.ExclusionChartController class method) (nirs4all.controllers.charts.folds.FoldChartController class method) (nirs4all.controllers.charts.spectra.SpectraChartController class method) (nirs4all.controllers.charts.spectral_distribution.SpectralDistributionController class method) (nirs4all.controllers.charts.targets.YChartController class method) (nirs4all.controllers.ConcatAugmentationController class method) (nirs4all.controllers.controller.OperatorController class method) (nirs4all.controllers.CrossValidatorController class method) (nirs4all.controllers.data.auto_transfer_preproc.AutoTransferPreprocessingController class method) (nirs4all.controllers.data.AutoTransferPreprocessingController class method) (nirs4all.controllers.data.branch.BranchController class method) (nirs4all.controllers.data.concat_transform.ConcatAugmentationController class method) (nirs4all.controllers.data.ConcatAugmentationController class method) (nirs4all.controllers.data.feature_augmentation.FeatureAugmentationController class method) (nirs4all.controllers.data.feature_selection.FeatureSelectionController class method) (nirs4all.controllers.data.FeatureAugmentationController class method) (nirs4all.controllers.data.FeatureSelectionController class method) (nirs4all.controllers.data.merge.MergeController class method) (nirs4all.controllers.data.MergeController class method) (nirs4all.controllers.data.metadata_partitioner.MetadataPartitionerController class method) (nirs4all.controllers.data.MetadataPartitionerController class method) (nirs4all.controllers.data.outlier_excluder.OutlierExcluderController class method) (nirs4all.controllers.data.OutlierExcluderController class method) (nirs4all.controllers.data.repetition.RepToPPController class method) (nirs4all.controllers.data.repetition.RepToSourcesController class method) (nirs4all.controllers.data.RepToPPController class method) (nirs4all.controllers.data.RepToSourcesController class method) (nirs4all.controllers.data.resampler.ResamplerController class method) (nirs4all.controllers.data.ResamplerController class method) (nirs4all.controllers.data.sample_augmentation.SampleAugmentationController class method) (nirs4all.controllers.data.sample_filter.SampleFilterController class method) (nirs4all.controllers.data.sample_partitioner.SamplePartitionerController class method) (nirs4all.controllers.data.SampleAugmentationController class method) (nirs4all.controllers.data.SampleFilterController class method) (nirs4all.controllers.data.SamplePartitionerController class method) (nirs4all.controllers.data.source_branch.SourceBranchController class method) (nirs4all.controllers.data.SourceBranchController class method) (nirs4all.controllers.DummyController class method) (nirs4all.controllers.FeatureAugmentationController class method) (nirs4all.controllers.flow.dummy.DummyController class method) (nirs4all.controllers.flow.DummyController class method) (nirs4all.controllers.FoldChartController class method) (nirs4all.controllers.models.base_model.BaseModelController class method) (nirs4all.controllers.models.BaseModelController class method) (nirs4all.controllers.OperatorController class method) (nirs4all.controllers.ResamplerController class method) (nirs4all.controllers.SampleAugmentationController class method) (nirs4all.controllers.SampleFilterController class method) (nirs4all.controllers.SpectraChartController class method) (nirs4all.controllers.SpectralDistributionController class method) (nirs4all.controllers.splitters.fold_file_loader.FoldFileLoaderController class method) (nirs4all.controllers.splitters.FoldFileLoaderController class method) (nirs4all.controllers.splitters.split.CrossValidatorController class method) (nirs4all.controllers.TransformerMixinController class method) (nirs4all.controllers.transforms.transformer.TransformerMixinController class method) (nirs4all.controllers.transforms.y_transformer.YTransformerMixinController class method) (nirs4all.controllers.YChartController class method) (nirs4all.controllers.YTransformerMixinController class method) svds_ (nirs4all.operators.transforms.nirs.WaveletSVD attribute) (nirs4all.operators.transforms.WaveletSVD attribute) Symbols (class in nirs4all.core.logging) (class in nirs4all.core.logging.formatters) SyntheticDatasetBuilder (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.builder) SyntheticDatasetConfig (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.config) SyntheticNIRSGenerator (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.generator) SystematicCircularSplitter (class in nirs4all.operators.splitters) (class in nirs4all.operators.splitters.splitters)

T

TabReportManager (class in nirs4all.visualization.reports) target_component (nirs4all.data.synthetic.builder.BuilderState attribute) target_features (nirs4all.pipeline.config.context.StepMetadata attribute), [1] (nirs4all.pipeline.config.StepMetadata attribute), [1] target_indices (nirs4all.data.selection.role_assigner.RoleAssignmentResult attribute), [1] target_method (nirs4all.data.aggregation.AggregationConfig attribute), [1] (nirs4all.data.aggregation.aggregator.AggregationConfig attribute), [1] target_model (nirs4all.pipeline.config.context.RuntimeContext attribute) (nirs4all.pipeline.config.RuntimeContext attribute) (nirs4all.pipeline.Explainer attribute) (nirs4all.pipeline.explainer.Explainer attribute) (nirs4all.pipeline.Predictor attribute) (nirs4all.pipeline.predictor.Predictor attribute) (nirs4all.pipeline.ResolvedPrediction attribute), [1] (nirs4all.pipeline.resolver.ResolvedPrediction attribute), [1] target_model_name (nirs4all.pipeline.minimal_predictor.MinimalArtifactProvider attribute) (nirs4all.pipeline.MinimalArtifactProvider attribute) target_range (nirs4all.data.synthetic.builder.BuilderState attribute) target_samples (nirs4all.pipeline.config.context.StepMetadata attribute), [1] (nirs4all.pipeline.config.StepMetadata attribute), [1] target_sub_index (nirs4all.pipeline.minimal_predictor.MinimalArtifactProvider attribute) (nirs4all.pipeline.MinimalArtifactProvider attribute) target_transform (nirs4all.data.synthetic.builder.BuilderState attribute) target_type_weights (nirs4all.data.synthetic.NIRSPriorConfig attribute) (nirs4all.data.synthetic.prior.NIRSPriorConfig attribute) TargetConfig (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.config) TargetGenerator (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.targets) TargetResolver (class in nirs4all.pipeline) (class in nirs4all.pipeline.storage) (class in nirs4all.pipeline.storage.io_resolver) Targets (class in nirs4all.data.targets) targets (nirs4all.data.ColumnConfig attribute) (nirs4all.data.dataset.SpectroDataset attribute) (nirs4all.data.schema.ColumnConfig attribute) (nirs4all.data.schema.config.ColumnConfig attribute) (nirs4all.data.selection.role_assigner.RoleAssignmentResult attribute), [1] (nirs4all.data.SpectroDataset attribute) (nirs4all.data.synthetic.BenchmarkDatasetInfo attribute), [1] (nirs4all.data.synthetic.benchmarks.BenchmarkDatasetInfo attribute), [1] (nirs4all.data.synthetic.config.SyntheticDatasetConfig attribute), [1] (nirs4all.data.synthetic.MultiSourceResult attribute), [1] (nirs4all.data.synthetic.sources.MultiSourceResult attribute), [1] (nirs4all.data.synthetic.SyntheticDatasetConfig attribute), [1] TarLoader (class in nirs4all.data.loaders) (class in nirs4all.data.loaders.archive_loader) task_type (nirs4all.controllers.models.stacking.classification.ClassificationInfo attribute), [1] (nirs4all.controllers.models.stacking.ClassificationInfo attribute), [1] (nirs4all.controllers.models.stacking.MetaModelArtifact attribute) (nirs4all.controllers.models.stacking.serialization.MetaModelArtifact attribute) (nirs4all.data.dataset.SpectroDataset property) (nirs4all.data.DatasetConfigSchema attribute) (nirs4all.data.schema.config.DatasetConfigSchema attribute) (nirs4all.data.schema.DatasetConfigSchema attribute) (nirs4all.data.SpectroDataset property) (nirs4all.data.targets.Targets property) task_type_forced (nirs4all.data.targets.Targets property) TaskType (class in nirs4all.core) (class in nirs4all.core.task_type) (class in nirs4all.data) (class in nirs4all.data.schema) (class in nirs4all.data.schema.config) TaskTypeDetector (class in nirs4all.controllers.models.stacking) (class in nirs4all.controllers.models.stacking.classification) temperature (nirs4all.data.synthetic.environmental.EnvironmentalEffectsConfig attribute), [1] (nirs4all.data.synthetic.EnvironmentalEffectsConfig attribute), [1] temperature_config (nirs4all.data.synthetic.FittedParameters attribute), [1] (nirs4all.data.synthetic.fitter.FittedParameters attribute), [1] temperature_interaction (nirs4all.data.synthetic.environmental.MoistureConfig attribute), [1] (nirs4all.data.synthetic.MoistureConfig attribute), [1] temperature_k (nirs4all.data.synthetic.DetectorConfig attribute), [1] (nirs4all.data.synthetic.detectors.DetectorConfig attribute), [1] temperature_range (nirs4all.data.synthetic.NIRSPriorConfig attribute), [1] (nirs4all.data.synthetic.prior.NIRSPriorConfig attribute), [1] temperature_sensitivity (nirs4all.data.synthetic.InstrumentArchetype attribute), [1] (nirs4all.data.synthetic.instruments.InstrumentArchetype attribute), [1] temperature_sensitivity_score (nirs4all.data.synthetic.fitter.SpectralProperties attribute), [1] (nirs4all.data.synthetic.SpectralProperties attribute), [1] temperature_sim (nirs4all.data.synthetic.environmental.EnvironmentalEffectsSimulator attribute) (nirs4all.data.synthetic.EnvironmentalEffectsSimulator attribute) temperature_variation (nirs4all.data.synthetic.environmental.TemperatureConfig attribute), [1] (nirs4all.data.synthetic.TemperatureConfig attribute), [1] TemperatureConfig (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.environmental) TemperatureEffectParams (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.environmental) TemperatureEffectSimulator (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.environmental) temporal_drift (nirs4all.data.synthetic.builder.BuilderState attribute) (nirs4all.data.synthetic.config.ConfounderConfig attribute), [1] (nirs4all.data.synthetic.targets.NonLinearTargetConfig attribute), [1] TensorFlowCallbackFactory (class in nirs4all.controllers.models.tensorflow) (class in nirs4all.controllers.models.tensorflow.config) TensorFlowCompilationConfig (class in nirs4all.controllers.models.tensorflow) (class in nirs4all.controllers.models.tensorflow.config) TensorFlowDataPreparation (class in nirs4all.controllers.models.tensorflow) (class in nirs4all.controllers.models.tensorflow.data_prep) TensorFlowFitConfig (class in nirs4all.controllers.models.tensorflow) (class in nirs4all.controllers.models.tensorflow.config) TensorFlowModelController (class in nirs4all.controllers) (class in nirs4all.controllers.models) (class in nirs4all.controllers.models.tensorflow_model) test (nirs4all.controllers.models.components.PartitionScores attribute) (nirs4all.controllers.models.components.score_calculator.PartitionScores attribute) (nirs4all.data.PartitionConfig attribute) (nirs4all.data.schema.config.PartitionConfig attribute) TEST (nirs4all.data.schema.config.PartitionType attribute) test (nirs4all.data.schema.PartitionConfig attribute) TEST (nirs4all.data.schema.PartitionType attribute) test_aggregation (nirs4all.operators.models.meta.StackingConfig attribute), [1] (nirs4all.operators.models.StackingConfig attribute), [1] test_data (nirs4all.data.partition.partition_assigner.PartitionResult attribute), [1] (nirs4all.data.partition.PartitionResult attribute), [1] (nirs4all.data.PartitionResult attribute), [1] test_file (nirs4all.data.PartitionConfig attribute) (nirs4all.data.schema.config.PartitionConfig attribute) (nirs4all.data.schema.PartitionConfig attribute) test_group (nirs4all.data.DatasetConfigSchema attribute) (nirs4all.data.schema.config.DatasetConfigSchema attribute) (nirs4all.data.schema.DatasetConfigSchema attribute) test_group_filter (nirs4all.data.DatasetConfigSchema attribute) (nirs4all.data.schema.config.DatasetConfigSchema attribute) (nirs4all.data.schema.DatasetConfigSchema attribute) test_group_params (nirs4all.data.DatasetConfigSchema attribute) (nirs4all.data.schema.config.DatasetConfigSchema attribute) (nirs4all.data.schema.DatasetConfigSchema attribute) test_indices (nirs4all.data.partition.partition_assigner.PartitionResult attribute), [1] (nirs4all.data.partition.PartitionResult attribute), [1] (nirs4all.data.PartitionResult attribute), [1] test_installation() (in module nirs4all.cli.installation_test) test_integration() (in module nirs4all.cli.installation_test) test_params (nirs4all.data.DatasetConfigSchema attribute) (nirs4all.data.schema.config.DatasetConfigSchema attribute) (nirs4all.data.schema.DatasetConfigSchema attribute) test_values (nirs4all.data.PartitionConfig attribute) (nirs4all.data.schema.config.PartitionConfig attribute) (nirs4all.data.schema.PartitionConfig attribute) test_x (nirs4all.data.DatasetConfigSchema attribute) (nirs4all.data.schema.config.DatasetConfigSchema attribute) (nirs4all.data.schema.config.SourceConfig attribute) (nirs4all.data.schema.config.VariationConfig attribute) (nirs4all.data.schema.DatasetConfigSchema attribute) (nirs4all.data.schema.SourceConfig attribute) (nirs4all.data.schema.VariationConfig attribute) test_x_filter (nirs4all.data.DatasetConfigSchema attribute) (nirs4all.data.schema.config.DatasetConfigSchema attribute) (nirs4all.data.schema.DatasetConfigSchema attribute) test_x_params (nirs4all.data.DatasetConfigSchema attribute) (nirs4all.data.schema.config.DatasetConfigSchema attribute) (nirs4all.data.schema.DatasetConfigSchema attribute) test_y (nirs4all.data.DatasetConfigSchema attribute) (nirs4all.data.schema.config.DatasetConfigSchema attribute) (nirs4all.data.schema.DatasetConfigSchema attribute) test_y_filter (nirs4all.data.DatasetConfigSchema attribute) (nirs4all.data.schema.config.DatasetConfigSchema attribute) (nirs4all.data.schema.DatasetConfigSchema attribute) test_y_params (nirs4all.data.DatasetConfigSchema attribute) (nirs4all.data.schema.config.DatasetConfigSchema attribute) (nirs4all.data.schema.DatasetConfigSchema attribute) TestAggregation (class in nirs4all.operators.models) (class in nirs4all.operators.models.meta) TEXT (nirs4all.data.HeaderUnit attribute) (nirs4all.data.schema.config.HeaderUnit attribute) (nirs4all.data.schema.HeaderUnit attribute) TEXTILE (nirs4all.data.synthetic.DomainCategory attribute) (nirs4all.data.synthetic.domains.DomainCategory attribute) thermal_noise_enabled (nirs4all.data.synthetic.detectors.NoiseModelConfig attribute), [1] (nirs4all.data.synthetic.NoiseModelConfig attribute), [1] thermal_noise_factor (nirs4all.data.synthetic.detectors.NoiseModelConfig attribute), [1] (nirs4all.data.synthetic.NoiseModelConfig attribute), [1] THIOL (nirs4all.data.synthetic.FunctionalGroupType attribute) (nirs4all.data.synthetic.procedural.FunctionalGroupType attribute) threshold (nirs4all.data.synthetic.MetricResult attribute), [1] (nirs4all.data.synthetic.validation.MetricResult attribute), [1] (nirs4all.operators.filters.x_outlier.XOutlierFilter attribute) (nirs4all.operators.filters.XOutlierFilter attribute) (nirs4all.operators.filters.y_outlier.YOutlierFilter attribute) (nirs4all.operators.filters.YOutlierFilter attribute) (nirs4all.operators.YOutlierFilter attribute) threshold_ (nirs4all.operators.transforms.feature_selection.MCUVE attribute) (nirs4all.operators.transforms.MCUVE attribute) threshold_multiplier (nirs4all.operators.filters.high_leverage.HighLeverageFilter attribute) (nirs4all.operators.filters.HighLeverageFilter attribute) ThrottledHandler (class in nirs4all.core.logging) (class in nirs4all.core.logging.handlers) tick_fontsize (nirs4all.visualization.charts.ChartConfig attribute), [1] (nirs4all.visualization.charts.config.ChartConfig attribute), [1] tilt_std (nirs4all.data.synthetic.FittedParameters attribute), [1] (nirs4all.data.synthetic.fitter.FittedParameters attribute), [1] timestamp (nirs4all.core.logging.events.LogEvent attribute), [1] (nirs4all.core.logging.LogEvent attribute), [1] (nirs4all.data.performance.cache.CacheEntry attribute), [1] (nirs4all.data.performance.CacheEntry attribute), [1] (nirs4all.operators.filters.FilteringReport attribute), [1] (nirs4all.operators.filters.report.FilteringReport attribute), [1] timing (nirs4all.analysis.results.TransferSelectionResults attribute), [1] (nirs4all.analysis.TransferSelectionResults attribute), [1] TISSUE (nirs4all.data.synthetic.MatrixType attribute) (nirs4all.data.synthetic.prior.MatrixType attribute) title_fontsize (nirs4all.visualization.charts.ChartConfig attribute), [1] (nirs4all.visualization.charts.config.ChartConfig attribute), [1] to_artifact_id() (nirs4all.pipeline.storage.artifacts.ExecutionPath method) (nirs4all.pipeline.storage.artifacts.utils.ExecutionPath method) to_assigner_spec() (nirs4all.data.PartitionConfig method) (nirs4all.data.schema.config.PartitionConfig method) (nirs4all.data.schema.PartitionConfig method) to_bytes() (in module nirs4all.pipeline.storage.artifacts.artifact_persistence) to_csv() (in module nirs4all.api.generate) (nirs4all.data.synthetic.DatasetExporter method) (nirs4all.data.synthetic.exporter.DatasetExporter method) (nirs4all.visualization.analysis.branch.BranchSummary method) (nirs4all.visualization.analysis.BranchSummary method) (nirs4all.visualization.BranchSummary method) to_dataframe() (in module nirs4all.pipeline.config.generator) (nirs4all.analysis.results.TransferSelectionResults method) (nirs4all.analysis.TransferSelectionResults method) (nirs4all.api.ExplainResult method), [1] (nirs4all.api.PredictResult method), [1] (nirs4all.api.result.ExplainResult method), [1] (nirs4all.api.result.PredictResult method), [1] (nirs4all.data.Predictions method) (nirs4all.data.predictions.Predictions method) (nirs4all.ExplainResult method), [1] (nirs4all.PredictResult method), [1] (nirs4all.visualization.analysis.branch.BranchSummary method) (nirs4all.visualization.analysis.BranchSummary method) (nirs4all.visualization.BranchSummary method) to_dict() (nirs4all.analysis.results.TransferResult method) (nirs4all.analysis.transfer_metrics.TransferMetrics method) (nirs4all.analysis.TransferMetrics method) (nirs4all.analysis.TransferResult method) (nirs4all.controllers.data.merge.DisjointBranchInfo method) (nirs4all.controllers.data.merge.DisjointMergeMetadata method) (nirs4all.controllers.data.merge.SourceMergeConfig method) (nirs4all.controllers.models.stacking.MetaModelArtifact method) (nirs4all.controllers.models.stacking.serialization.MetaModelArtifact method) (nirs4all.controllers.models.stacking.serialization.SourceModelReference method) (nirs4all.controllers.models.stacking.SourceModelReference method) (nirs4all.core.logging.events.LogEvent method) (nirs4all.core.logging.LogEvent method) (nirs4all.data.DatasetConfigSchema method) (nirs4all.data.schema.config.DatasetConfigSchema method) (nirs4all.data.schema.DatasetConfigSchema method) (nirs4all.data.schema.validation.DiagnosticMessage method) (nirs4all.data.schema.validation.DiagnosticReport method) (nirs4all.data.schema.validation.error_codes.DiagnosticMessage method) (nirs4all.data.schema.validation.error_codes.DiagnosticReport method) (nirs4all.data.synthetic.FittedParameters method) (nirs4all.data.synthetic.fitter.FittedParameters method) (nirs4all.data.synthetic.metadata.MetadataGenerationResult method) (nirs4all.data.synthetic.MetadataGenerationResult method) (nirs4all.data.synthetic.SpectralRealismScore method) (nirs4all.data.synthetic.validation.SpectralRealismScore method) (nirs4all.operators.data.merge.DisjointBranchInfo method) (nirs4all.operators.data.merge.DisjointMergeMetadata method) (nirs4all.operators.data.merge.MergeConfig method) (nirs4all.operators.data.merge.SourceBranchConfig method) (nirs4all.operators.data.merge.SourceMergeConfig method) (nirs4all.operators.data.MergeConfig method) (nirs4all.operators.data.repetition.RepetitionConfig method) (nirs4all.operators.data.RepetitionConfig method) (nirs4all.operators.data.SourceMergeConfig method) (nirs4all.operators.filters.FilteringReport method) (nirs4all.operators.filters.FilterResult method) (nirs4all.operators.filters.report.FilteringReport method) (nirs4all.operators.filters.report.FilterResult method) (nirs4all.pipeline.config.generator.ExpansionTreeNode method) (nirs4all.pipeline.ExecutionStep method) (nirs4all.pipeline.ExecutionTrace method) (nirs4all.pipeline.StepArtifacts method) (nirs4all.pipeline.storage.artifacts.ArtifactRecord method) (nirs4all.pipeline.storage.artifacts.MetaModelConfig method) (nirs4all.pipeline.storage.artifacts.operator_chain.OperatorChain method) (nirs4all.pipeline.storage.artifacts.operator_chain.OperatorNode method) (nirs4all.pipeline.storage.artifacts.OperatorChain method) (nirs4all.pipeline.storage.artifacts.OperatorNode method) (nirs4all.pipeline.storage.artifacts.types.ArtifactRecord method) (nirs4all.pipeline.storage.artifacts.types.MetaModelConfig method) (nirs4all.pipeline.trace.execution_trace.ExecutionStep method) (nirs4all.pipeline.trace.execution_trace.ExecutionTrace method) (nirs4all.pipeline.trace.execution_trace.StepArtifacts method) (nirs4all.pipeline.trace.ExecutionStep method) (nirs4all.pipeline.trace.ExecutionTrace method) (nirs4all.pipeline.trace.StepArtifacts method) (nirs4all.visualization.analysis.branch.BranchSummary method) (nirs4all.visualization.analysis.BranchSummary method) (nirs4all.visualization.BranchSummary method) to_dicts() (nirs4all.data.Predictions method) (nirs4all.data.predictions.Predictions method) to_fold_list() (nirs4all.data.schema.config.FoldConfig method) (nirs4all.data.schema.FoldConfig method) to_folder() (in module nirs4all.api.generate) (nirs4all.data.synthetic.DatasetExporter method) (nirs4all.data.synthetic.exporter.DatasetExporter method) to_full_config() (nirs4all.data.synthetic.FittedParameters method) (nirs4all.data.synthetic.fitter.FittedParameters method) to_generator_kwargs() (nirs4all.data.synthetic.FittedParameters method) (nirs4all.data.synthetic.fitter.FittedParameters method) to_hash() (nirs4all.pipeline.storage.artifacts.operator_chain.OperatorChain method) (nirs4all.pipeline.storage.artifacts.OperatorChain method) to_json() (nirs4all.controllers.models.stacking.MetaModelArtifact method) (nirs4all.controllers.models.stacking.serialization.MetaModelArtifact method) (nirs4all.core.logging.events.LogEvent method) (nirs4all.core.logging.LogEvent method) (nirs4all.data.serialization.ConfigSerializer method) (nirs4all.data.serialization.serializer.ConfigSerializer method) (nirs4all.operators.filters.FilteringReport method) (nirs4all.operators.filters.report.FilteringReport method) to_key() (nirs4all.pipeline.storage.artifacts.operator_chain.OperatorNode method) (nirs4all.pipeline.storage.artifacts.OperatorNode method) to_latex() (nirs4all.visualization.analysis.branch.BranchSummary method) (nirs4all.visualization.analysis.BranchSummary method) (nirs4all.visualization.BranchSummary method) to_legacy_format() (nirs4all.data.DatasetConfigSchema method) (nirs4all.data.schema.config.DatasetConfigSchema method) (nirs4all.data.schema.DatasetConfigSchema method) to_list() (nirs4all.api.PredictResult method), [1] (nirs4all.api.result.PredictResult method), [1] (nirs4all.PredictResult method), [1] to_markdown() (nirs4all.visualization.analysis.branch.BranchSummary method) (nirs4all.visualization.analysis.BranchSummary method) (nirs4all.visualization.BranchSummary method) to_meta_model_config() (nirs4all.controllers.models.stacking.MetaModelSerializer method) (nirs4all.controllers.models.stacking.serialization.MetaModelSerializer method) to_numeric() (nirs4all.data.metadata.Metadata method) to_numpy (nirs4all.data.synthetic.accelerated.AcceleratedArrays attribute) (nirs4all.data.synthetic.AcceleratedArrays attribute) to_numpy() (nirs4all.api.PredictResult method), [1] (nirs4all.api.result.PredictResult method), [1] (nirs4all.data.synthetic.DatasetExporter method) (nirs4all.data.synthetic.exporter.DatasetExporter method) (nirs4all.PredictResult method), [1] to_pandas() (nirs4all.data.Predictions method) (nirs4all.data.predictions.Predictions method) to_params() (nirs4all.data.detection.DetectionResult method) (nirs4all.data.detection.detector.DetectionResult method) to_path() (nirs4all.pipeline.storage.artifacts.operator_chain.OperatorChain method) (nirs4all.pipeline.storage.artifacts.OperatorChain method) to_pipeline_spec() (nirs4all.analysis.results.TransferSelectionResults method) (nirs4all.analysis.TransferSelectionResults method) to_preprocessing_list() (nirs4all.analysis.results.TransferSelectionResults method) (nirs4all.analysis.TransferSelectionResults method) to_resolved_prediction() (nirs4all.pipeline.bundle.BundleLoader method) (nirs4all.pipeline.bundle.loader.BundleLoader method) (nirs4all.pipeline.BundleLoader method) to_yaml() (nirs4all.data.serialization.ConfigSerializer method) (nirs4all.data.serialization.serializer.ConfigSerializer method) ToAbsorbance (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.signal_conversion) top() (nirs4all.api.result.RunResult method), [1] (nirs4all.api.RunResult method), [1] (nirs4all.data.Predictions method) (nirs4all.data.predictions.Predictions method) (nirs4all.RunResult method), [1]

top_features (nirs4all.api.ExplainResult property) (nirs4all.api.result.ExplainResult property) (nirs4all.ExplainResult property) TOP_K (nirs4all.operators.data.merge.SelectionStrategy attribute), [1] (nirs4all.operators.data.SelectionStrategy attribute), [1] top_k() (nirs4all.analysis.results.TransferSelectionResults method) (nirs4all.analysis.TransferSelectionResults method) TopKByMetricSelector (class in nirs4all.operators.models) (class in nirs4all.operators.models.selection) TopKComparisonChart (class in nirs4all.visualization.charts) (class in nirs4all.visualization.charts.top_k_comparison) total (nirs4all.core.logging.BranchContext attribute), [1] (nirs4all.core.logging.context.BranchContext attribute), [1] (nirs4all.core.logging.context.SourceContext attribute), [1] (nirs4all.core.logging.SourceContext attribute), [1] total_models (nirs4all.controllers.models.stacking.crossbranch.CrossBranchValidationResult property) (nirs4all.controllers.models.stacking.CrossBranchValidationResult property) total_samples (nirs4all.controllers.data.merge.DisjointBranchAnalysis attribute), [1] trace (nirs4all.pipeline.bundle.BundleLoader attribute) (nirs4all.pipeline.bundle.loader.BundleLoader attribute) (nirs4all.pipeline.BundleLoader attribute) (nirs4all.pipeline.config.context.LoaderArtifactProvider attribute) (nirs4all.pipeline.config.LoaderArtifactProvider attribute) (nirs4all.pipeline.ExtractedPipeline attribute), [1] (nirs4all.pipeline.LoaderArtifactProvider attribute) (nirs4all.pipeline.ResolvedPrediction attribute), [1] (nirs4all.pipeline.resolver.ResolvedPrediction attribute), [1] (nirs4all.pipeline.RetrainArtifactProvider attribute) (nirs4all.pipeline.retrainer.ExtractedPipeline attribute), [1] (nirs4all.pipeline.retrainer.RetrainArtifactProvider attribute) (nirs4all.pipeline.trace.recorder.TraceRecorder attribute) (nirs4all.pipeline.trace.TraceRecorder attribute) (nirs4all.pipeline.TraceRecorder attribute) trace() (nirs4all.core.logging.config.Nirs4allLogger method) (nirs4all.core.logging.Nirs4allLogger method) trace_id (nirs4all.pipeline.bundle.BundleMetadata attribute), [1] (nirs4all.pipeline.bundle.loader.BundleMetadata attribute), [1] (nirs4all.pipeline.BundleMetadata attribute), [1] (nirs4all.pipeline.ExecutionTrace attribute), [1] (nirs4all.pipeline.MinimalPipeline attribute), [1] TRACE_ID (nirs4all.pipeline.resolver.SourceType attribute), [1] (nirs4all.pipeline.SourceType attribute), [1] trace_id (nirs4all.pipeline.trace.execution_trace.ExecutionTrace attribute), [1] (nirs4all.pipeline.trace.ExecutionTrace attribute), [1] (nirs4all.pipeline.trace.extractor.MinimalPipeline attribute), [1] (nirs4all.pipeline.trace.MinimalPipeline attribute), [1] (nirs4all.pipeline.trace.recorder.TraceRecorder property) (nirs4all.pipeline.trace.TraceRecorder property) (nirs4all.pipeline.TraceRecorder property) trace_recorder (nirs4all.pipeline.config.context.RuntimeContext attribute), [1] (nirs4all.pipeline.config.RuntimeContext attribute), [1] TraceBasedExtractor (class in nirs4all.pipeline) (class in nirs4all.pipeline.trace) (class in nirs4all.pipeline.trace.extractor) TraceRecorder (class in nirs4all.pipeline) (class in nirs4all.pipeline.trace) (class in nirs4all.pipeline.trace.recorder) train (nirs4all.controllers.models.components.PartitionScores attribute) (nirs4all.controllers.models.components.score_calculator.PartitionScores attribute) TRAIN (nirs4all.core.logging.events.Phase attribute) (nirs4all.core.logging.Phase attribute) train (nirs4all.data.PartitionConfig attribute) (nirs4all.data.schema.config.FoldDefinition attribute) (nirs4all.data.schema.config.PartitionConfig attribute) TRAIN (nirs4all.data.schema.config.PartitionType attribute) train (nirs4all.data.schema.FoldDefinition attribute) (nirs4all.data.schema.PartitionConfig attribute) TRAIN (nirs4all.data.schema.PartitionType attribute) (nirs4all.pipeline.trace.execution_trace.StepExecutionMode attribute), [1] (nirs4all.pipeline.trace.StepExecutionMode attribute), [1] train() (nirs4all.controllers.models.base_model.BaseModelController method) (nirs4all.controllers.models.BaseModelController method) train_data (nirs4all.data.partition.partition_assigner.PartitionResult attribute), [1] (nirs4all.data.partition.PartitionResult attribute), [1] (nirs4all.data.PartitionResult attribute), [1] train_file (nirs4all.data.PartitionConfig attribute) (nirs4all.data.schema.config.PartitionConfig attribute) (nirs4all.data.schema.PartitionConfig attribute) train_group (nirs4all.data.DatasetConfigSchema attribute) (nirs4all.data.schema.config.DatasetConfigSchema attribute) (nirs4all.data.schema.DatasetConfigSchema attribute) train_group_filter (nirs4all.data.DatasetConfigSchema attribute) (nirs4all.data.schema.config.DatasetConfigSchema attribute) (nirs4all.data.schema.DatasetConfigSchema attribute) train_group_params (nirs4all.data.DatasetConfigSchema attribute) (nirs4all.data.schema.config.DatasetConfigSchema attribute) (nirs4all.data.schema.DatasetConfigSchema attribute) train_indices (nirs4all.data.partition.partition_assigner.PartitionResult attribute), [1] (nirs4all.data.partition.PartitionResult attribute), [1] (nirs4all.data.PartitionResult attribute), [1] TRAIN_META (nirs4all.core.logging.events.EventType attribute) (nirs4all.core.logging.EventType attribute) train_params (nirs4all.data.DatasetConfigSchema attribute) (nirs4all.data.schema.config.DatasetConfigSchema attribute) (nirs4all.data.schema.DatasetConfigSchema attribute) train_ratio (nirs4all.data.synthetic.builder.BuilderState attribute) (nirs4all.data.synthetic.config.PartitionConfig attribute), [1] (nirs4all.data.synthetic.PartitionConfig attribute), [1] train_values (nirs4all.data.PartitionConfig attribute) (nirs4all.data.schema.config.PartitionConfig attribute) (nirs4all.data.schema.PartitionConfig attribute) train_x (nirs4all.data.DatasetConfigSchema attribute) (nirs4all.data.schema.config.DatasetConfigSchema attribute) (nirs4all.data.schema.config.SourceConfig attribute) (nirs4all.data.schema.config.VariationConfig attribute) (nirs4all.data.schema.DatasetConfigSchema attribute) (nirs4all.data.schema.SourceConfig attribute) (nirs4all.data.schema.VariationConfig attribute) train_x_filter (nirs4all.data.DatasetConfigSchema attribute) (nirs4all.data.schema.config.DatasetConfigSchema attribute) (nirs4all.data.schema.DatasetConfigSchema attribute) train_x_params (nirs4all.data.DatasetConfigSchema attribute) (nirs4all.data.schema.config.DatasetConfigSchema attribute) (nirs4all.data.schema.DatasetConfigSchema attribute) train_y (nirs4all.data.DatasetConfigSchema attribute) (nirs4all.data.schema.config.DatasetConfigSchema attribute) (nirs4all.data.schema.DatasetConfigSchema attribute) train_y_filter (nirs4all.data.DatasetConfigSchema attribute) (nirs4all.data.schema.config.DatasetConfigSchema attribute) (nirs4all.data.schema.DatasetConfigSchema attribute) train_y_params (nirs4all.data.DatasetConfigSchema attribute) (nirs4all.data.schema.config.DatasetConfigSchema attribute) (nirs4all.data.schema.DatasetConfigSchema attribute) training_branch (nirs4all.controllers.models.stacking.BranchMismatchError attribute) (nirs4all.controllers.models.stacking.exceptions.BranchMismatchError attribute) training_level() (nirs4all.core.logging.MultiLevelProgress method) (nirs4all.core.logging.progress.MultiLevelProgress method) training_timestamp (nirs4all.controllers.models.stacking.MetaModelArtifact attribute), [1] (nirs4all.controllers.models.stacking.serialization.MetaModelArtifact attribute), [1] TrainingSetReconstructor (class in nirs4all.controllers.models) (class in nirs4all.controllers.models.stacking) (class in nirs4all.controllers.models.stacking.reconstructor) transf_set() (in module nirs4all.operators.transforms) (in module nirs4all.operators.transforms.presets) TRANSFER (nirs4all.pipeline.retrainer.RetrainMode attribute), [1] (nirs4all.pipeline.RetrainMode attribute), [1] transfer_score (nirs4all.analysis.results.TransferResult attribute), [1] (nirs4all.analysis.TransferResult attribute), [1] TransferMetrics (class in nirs4all.analysis) (class in nirs4all.analysis.transfer_metrics) TransferMetricsComputer (class in nirs4all.analysis) (class in nirs4all.analysis.transfer_metrics) TransferPreprocessingSelector (class in nirs4all.analysis) (class in nirs4all.analysis.selector) TransferResult (class in nirs4all.analysis) (class in nirs4all.analysis.results) TransferSelectionResults (class in nirs4all.analysis) (class in nirs4all.analysis.results) TRANSFLECTANCE (nirs4all.data.synthetic.fitter.MeasurementModeInference attribute) (nirs4all.data.synthetic.measurement_modes.MeasurementMode attribute) transflectance (nirs4all.data.synthetic.measurement_modes.MeasurementModeConfig attribute), [1] TRANSFLECTANCE (nirs4all.data.synthetic.MeasurementMode attribute) (nirs4all.data.synthetic.MeasurementModeInference attribute) TransflectanceConfig (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.measurement_modes) TRANSFORM (nirs4all.core.logging.events.EventType attribute) (nirs4all.core.logging.EventType attribute) transform (nirs4all.data.synthetic.config.TargetConfig attribute), [1] (nirs4all.data.synthetic.TargetConfig attribute), [1] transform() (nirs4all.operators.Augmenter method) (nirs4all.operators.Baseline method) (nirs4all.operators.CropTransformer method) (nirs4all.operators.Derivate method) (nirs4all.operators.Detrend method) (nirs4all.operators.filters.base.SampleFilter method) (nirs4all.operators.filters.SampleFilter method) (nirs4all.operators.Gaussian method) (nirs4all.operators.LocalStandardNormalVariate method) (nirs4all.operators.models.FCKPLS method) (nirs4all.operators.models.FractionalConvFeaturizer method) (nirs4all.operators.models.IdentityFeaturizer method) (nirs4all.operators.models.IntervalPLS method) (nirs4all.operators.models.KernelPLS method) (nirs4all.operators.models.KOPLS method) (nirs4all.operators.models.MBPLS method) (nirs4all.operators.models.OKLMPLS method) (nirs4all.operators.models.OPLS method) (nirs4all.operators.models.OPLSDA method) (nirs4all.operators.models.PolynomialFeaturizer method) (nirs4all.operators.models.RBFFeaturizer method) (nirs4all.operators.models.RecursivePLS method) (nirs4all.operators.models.RobustPLS method) (nirs4all.operators.models.SIMPLS method) (nirs4all.operators.models.sklearn.FCKPLS method) (nirs4all.operators.models.sklearn.fckpls.FCKPLS method) (nirs4all.operators.models.sklearn.fckpls.FractionalConvFeaturizer method) (nirs4all.operators.models.sklearn.FractionalConvFeaturizer method) (nirs4all.operators.models.sklearn.IdentityFeaturizer method) (nirs4all.operators.models.sklearn.IntervalPLS method) (nirs4all.operators.models.sklearn.ipls.IntervalPLS method) (nirs4all.operators.models.sklearn.KernelPLS method) (nirs4all.operators.models.sklearn.KOPLS method) (nirs4all.operators.models.sklearn.kopls.KOPLS method) (nirs4all.operators.models.sklearn.MBPLS method) (nirs4all.operators.models.sklearn.mbpls.MBPLS method) (nirs4all.operators.models.sklearn.nlpls.KernelPLS method) (nirs4all.operators.models.sklearn.OKLMPLS method) (nirs4all.operators.models.sklearn.oklmpls.IdentityFeaturizer method) (nirs4all.operators.models.sklearn.oklmpls.OKLMPLS method) (nirs4all.operators.models.sklearn.oklmpls.PolynomialFeaturizer method) (nirs4all.operators.models.sklearn.oklmpls.RBFFeaturizer method) (nirs4all.operators.models.sklearn.OPLS method) (nirs4all.operators.models.sklearn.opls.OPLS method) (nirs4all.operators.models.sklearn.OPLSDA method) (nirs4all.operators.models.sklearn.oplsda.OPLSDA method) (nirs4all.operators.models.sklearn.PolynomialFeaturizer method) (nirs4all.operators.models.sklearn.RBFFeaturizer method) (nirs4all.operators.models.sklearn.recursive_pls.RecursivePLS method) (nirs4all.operators.models.sklearn.RecursivePLS method) (nirs4all.operators.models.sklearn.robust_pls.RobustPLS method) (nirs4all.operators.models.sklearn.RobustPLS method) (nirs4all.operators.models.sklearn.SIMPLS method) (nirs4all.operators.models.sklearn.simpls.SIMPLS method) (nirs4all.operators.models.sklearn.SparsePLS method) (nirs4all.operators.models.sklearn.sparsepls.SparsePLS method) (nirs4all.operators.models.SparsePLS method) (nirs4all.operators.MultiplicativeScatterCorrection method) (nirs4all.operators.Normalize method) (nirs4all.operators.ResampleTransformer method) (nirs4all.operators.RobustStandardNormalVariate method) (nirs4all.operators.SampleFilter method) (nirs4all.operators.SavitzkyGolay method) (nirs4all.operators.SimpleScale method) (nirs4all.operators.StandardNormalVariate method) (nirs4all.operators.transforms.Augmenter method) (nirs4all.operators.transforms.Baseline method) (nirs4all.operators.transforms.CARS method) (nirs4all.operators.transforms.CropTransformer method) (nirs4all.operators.transforms.Derivate method) (nirs4all.operators.transforms.Detrend method) (nirs4all.operators.transforms.feature_selection.CARS method) (nirs4all.operators.transforms.feature_selection.MCUVE method) (nirs4all.operators.transforms.features.CropTransformer method) (nirs4all.operators.transforms.features.FlattenPreprocessing method) (nirs4all.operators.transforms.features.ResampleTransformer method) (nirs4all.operators.transforms.FirstDerivative method) (nirs4all.operators.transforms.FlattenPreprocessing method) (nirs4all.operators.transforms.FractionToPercent method) (nirs4all.operators.transforms.FromAbsorbance method) (nirs4all.operators.transforms.Gaussian method) (nirs4all.operators.transforms.IntegerKBinsDiscretizer method) (nirs4all.operators.transforms.KubelkaMunk method) (nirs4all.operators.transforms.LocalStandardNormalVariate method) (nirs4all.operators.transforms.LogTransform method) (nirs4all.operators.transforms.MCUVE method) (nirs4all.operators.transforms.MultiplicativeScatterCorrection method) (nirs4all.operators.transforms.nirs.AreaNormalization method) (nirs4all.operators.transforms.nirs.ExtendedMultiplicativeScatterCorrection method) (nirs4all.operators.transforms.nirs.FirstDerivative method) (nirs4all.operators.transforms.nirs.LogTransform method) (nirs4all.operators.transforms.nirs.MultiplicativeScatterCorrection method) (nirs4all.operators.transforms.nirs.PyBaselineCorrection method) (nirs4all.operators.transforms.nirs.ReflectanceToAbsorbance method) (nirs4all.operators.transforms.nirs.SavitzkyGolay method) (nirs4all.operators.transforms.nirs.SecondDerivative method) (nirs4all.operators.transforms.nirs.Wavelet method) (nirs4all.operators.transforms.nirs.WaveletFeatures method) (nirs4all.operators.transforms.nirs.WaveletPCA method) (nirs4all.operators.transforms.nirs.WaveletSVD method) (nirs4all.operators.transforms.Normalize method) (nirs4all.operators.transforms.PercentToFraction method) (nirs4all.operators.transforms.PyBaselineCorrection method) (nirs4all.operators.transforms.RangeDiscretizer method) (nirs4all.operators.transforms.ReflectanceToAbsorbance method) (nirs4all.operators.transforms.Resampler method) (nirs4all.operators.transforms.resampler.Resampler method) (nirs4all.operators.transforms.ResampleTransformer method) (nirs4all.operators.transforms.RobustStandardNormalVariate method) (nirs4all.operators.transforms.SavitzkyGolay method) (nirs4all.operators.transforms.scalers.Derivate method) (nirs4all.operators.transforms.scalers.LocalStandardNormalVariate method) (nirs4all.operators.transforms.scalers.Normalize method) (nirs4all.operators.transforms.scalers.RobustStandardNormalVariate method) (nirs4all.operators.transforms.scalers.SimpleScale method) (nirs4all.operators.transforms.scalers.StandardNormalVariate method) (nirs4all.operators.transforms.SecondDerivative method) (nirs4all.operators.transforms.signal.Baseline method) (nirs4all.operators.transforms.signal.Detrend method) (nirs4all.operators.transforms.signal.Gaussian method) (nirs4all.operators.transforms.signal_conversion.FractionToPercent method) (nirs4all.operators.transforms.signal_conversion.FromAbsorbance method) (nirs4all.operators.transforms.signal_conversion.KubelkaMunk method) (nirs4all.operators.transforms.signal_conversion.PercentToFraction method) (nirs4all.operators.transforms.signal_conversion.SignalTypeConverter method) (nirs4all.operators.transforms.signal_conversion.ToAbsorbance method) (nirs4all.operators.transforms.SignalTypeConverter method) (nirs4all.operators.transforms.SimpleScale method) (nirs4all.operators.transforms.StandardNormalVariate method) (nirs4all.operators.transforms.targets.IntegerKBinsDiscretizer method) (nirs4all.operators.transforms.targets.RangeDiscretizer method) (nirs4all.operators.transforms.ToAbsorbance method) (nirs4all.operators.transforms.Wavelet method) (nirs4all.operators.transforms.WaveletFeatures method) (nirs4all.operators.transforms.WaveletPCA method) (nirs4all.operators.transforms.WaveletSVD method) (nirs4all.operators.Wavelet method) (nirs4all.sklearn.NIRSPipeline method), [1] (nirs4all.sklearn.pipeline.NIRSPipeline method), [1] transform_batch_to_unscaled() (nirs4all.controllers.models.components.prediction_transformer.PredictionTransformer method) (nirs4all.controllers.models.components.PredictionTransformer method) transform_predictions() (nirs4all.data.targets.Targets method) transform_to_unscaled() (nirs4all.controllers.models.components.prediction_transformer.PredictionTransformer method) (nirs4all.controllers.models.components.PredictionTransformer method) TRANSFORMER (nirs4all.pipeline.storage.artifacts.ArtifactType attribute) (nirs4all.pipeline.storage.artifacts.types.ArtifactType attribute) TransformerMixinController (class in nirs4all.controllers) (class in nirs4all.controllers.transforms.transformer) transforms (nirs4all.analysis.results.TransferResult attribute), [1] (nirs4all.analysis.TransferResult attribute), [1] TRANSMITTANCE (nirs4all.data.schema.config.SignalTypeEnum attribute) (nirs4all.data.schema.SignalTypeEnum attribute) (nirs4all.data.signal_type.SignalType attribute) (nirs4all.data.SignalType attribute) (nirs4all.data.synthetic.fitter.MeasurementModeInference attribute) (nirs4all.data.synthetic.measurement_modes.MeasurementMode attribute) transmittance (nirs4all.data.synthetic.measurement_modes.MeasurementModeConfig attribute), [1] TRANSMITTANCE (nirs4all.data.synthetic.MeasurementMode attribute) (nirs4all.data.synthetic.MeasurementModeInference attribute) TRANSMITTANCE_PERCENT (nirs4all.data.schema.config.SignalTypeEnum attribute) (nirs4all.data.schema.SignalTypeEnum attribute) (nirs4all.data.signal_type.SignalType attribute) (nirs4all.data.SignalType attribute) TransmittanceConfig (class in nirs4all.data.synthetic) (class in nirs4all.data.synthetic.measurement_modes) trts_r2 (nirs4all.data.synthetic.DatasetComparisonResult attribute), [1] (nirs4all.data.synthetic.validation.DatasetComparisonResult attribute), [1] TRUNCATE (nirs4all.operators.data.merge.ShapeMismatchStrategy attribute), [1] (nirs4all.operators.data.merge.SourceIncompatibleStrategy attribute), [1] (nirs4all.operators.data.repetition.UnequelRepsStrategy attribute), [1] (nirs4all.operators.data.ShapeMismatchStrategy attribute), [1] (nirs4all.operators.data.SourceIncompatibleStrategy attribute), [1] (nirs4all.operators.data.UnequelRepsStrategy attribute), [1] trustworthiness (nirs4all.analysis.transfer_metrics.TransferMetrics attribute) (nirs4all.analysis.TransferMetrics attribute) tstr_r2 (nirs4all.data.synthetic.DatasetComparisonResult attribute), [1] (nirs4all.data.synthetic.validation.DatasetComparisonResult attribute), [1] type (nirs4all.data.PartitionConfig attribute) (nirs4all.data.schema.config.PartitionConfig attribute) (nirs4all.data.schema.config.PreprocessingApplied attribute) (nirs4all.data.schema.PartitionConfig attribute) (nirs4all.data.schema.PreprocessingApplied attribute) type_error() (nirs4all.data.schema.validation.DiagnosticBuilder method) (nirs4all.data.schema.validation.error_codes.DiagnosticBuilder method) typical_components (nirs4all.data.synthetic.DomainConfig attribute), [1] (nirs4all.data.synthetic.domains.DomainConfig attribute), [1] typical_peak_density (nirs4all.data.synthetic.BenchmarkDatasetInfo attribute), [1] (nirs4all.data.synthetic.benchmarks.BenchmarkDatasetInfo attribute), [1] typical_sample_types (nirs4all.data.synthetic.DomainConfig attribute), [1] (nirs4all.data.synthetic.domains.DomainConfig attribute), [1] typical_snr (nirs4all.data.synthetic.BenchmarkDatasetInfo attribute), [1] (nirs4all.data.synthetic.benchmarks.BenchmarkDatasetInfo attribute), [1]

U

unchanged (nirs4all.data.serialization.serializer.ConfigDiff attribute), [1] UnequelRepsStrategy (class in nirs4all.operators.data) (class in nirs4all.operators.data.repetition) uniques() (nirs4all.data.indexer.Indexer method) UNKNOWN (nirs4all.controllers.models.stacking.branch_validator.BranchType attribute) (nirs4all.controllers.models.stacking.BranchType attribute) (nirs4all.controllers.models.stacking.classification.StackingTaskType attribute), [1] (nirs4all.controllers.models.stacking.StackingTaskType attribute), [1] (nirs4all.data.signal_type.SignalType attribute) (nirs4all.data.SignalType attribute) (nirs4all.data.synthetic.fitter.MeasurementModeInference attribute) (nirs4all.data.synthetic.MeasurementModeInference attribute) (nirs4all.pipeline.resolver.SourceType attribute), [1] (nirs4all.pipeline.SourceType attribute), [1] (nirs4all.pipeline.steps.parser.StepType attribute) unknown_policy (nirs4all.data.PartitionConfig attribute) (nirs4all.data.schema.config.PartitionConfig attribute) (nirs4all.data.schema.PartitionConfig attribute) unload() (nirs4all.data.performance.lazy_loader.LazyArray method) (nirs4all.data.performance.LazyArray method) unload_all() (nirs4all.data.performance.lazy_loader.LazyDataset method) (nirs4all.data.performance.LazyDataset method) unregister() (nirs4all.data.loaders.base.LoaderRegistry method) (nirs4all.data.loaders.LoaderRegistry method) unregister_preset() (in module nirs4all.pipeline.config.generator) unsafe (nirs4all.operators.data.merge.MergeConfig attribute), [1] (nirs4all.operators.data.MergeConfig attribute), [1] UnsharpSpectralMask (class in nirs4all.operators.transforms) update() (nirs4all.core.logging.EvaluationProgress method) (nirs4all.core.logging.progress.EvaluationProgress method) (nirs4all.core.logging.progress.ProgressBar method) (nirs4all.core.logging.progress.SpinnerProgress method) (nirs4all.core.logging.ProgressBar method) (nirs4all.core.logging.SpinnerProgress method) update_by_filter() (nirs4all.data.indexer.Indexer method) update_by_indices() (nirs4all.data.indexer.Indexer method) update_features() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.features.Features method) (nirs4all.data.FeatureSource method) (nirs4all.data.SpectroDataset method) update_manifest() (nirs4all.pipeline.storage.manifest_manager.ManifestManager method) (nirs4all.pipeline.storage.ManifestManager method) update_metadata() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.metadata.Metadata method) (nirs4all.data.SpectroDataset method) updated_context (nirs4all.pipeline.execution.result.StepResult attribute), [1] (nirs4all.pipeline.execution.StepResult attribute), [1] upgrade_manifest_to_v2() (nirs4all.pipeline.storage.manifest_manager.ManifestManager method) (nirs4all.pipeline.storage.ManifestManager method) upper_percentile (nirs4all.operators.filters.y_outlier.YOutlierFilter attribute) (nirs4all.operators.filters.YOutlierFilter attribute) (nirs4all.operators.YOutlierFilter attribute) use_colors (nirs4all.core.logging.progress.ProgressConfig attribute), [1] (nirs4all.core.logging.ProgressConfig attribute), [1] use_minimal_pipeline (nirs4all.pipeline.Predictor attribute) (nirs4all.pipeline.predictor.Predictor attribute) use_multi_source() (nirs4all.controllers.AugmentationChartController class method) (nirs4all.controllers.AutoTransferPreprocessingController class method) (nirs4all.controllers.BranchController class method) (nirs4all.controllers.charts.augmentation.AugmentationChartController class method) (nirs4all.controllers.charts.exclusion.ExclusionChartController class method) (nirs4all.controllers.charts.ExclusionChartController class method) (nirs4all.controllers.charts.folds.FoldChartController class method) (nirs4all.controllers.charts.spectra.SpectraChartController class method) (nirs4all.controllers.charts.spectral_distribution.SpectralDistributionController class method) (nirs4all.controllers.charts.targets.YChartController class method) (nirs4all.controllers.ConcatAugmentationController class method) (nirs4all.controllers.controller.OperatorController class method) (nirs4all.controllers.CrossValidatorController class method) (nirs4all.controllers.data.auto_transfer_preproc.AutoTransferPreprocessingController class method) (nirs4all.controllers.data.AutoTransferPreprocessingController class method) (nirs4all.controllers.data.branch.BranchController class method) (nirs4all.controllers.data.concat_transform.ConcatAugmentationController class method) (nirs4all.controllers.data.ConcatAugmentationController class method) (nirs4all.controllers.data.feature_augmentation.FeatureAugmentationController class method) (nirs4all.controllers.data.feature_selection.FeatureSelectionController class method) (nirs4all.controllers.data.FeatureAugmentationController class method) (nirs4all.controllers.data.FeatureSelectionController class method) (nirs4all.controllers.data.merge.MergeController class method) (nirs4all.controllers.data.MergeController class method) (nirs4all.controllers.data.metadata_partitioner.MetadataPartitionerController class method) (nirs4all.controllers.data.MetadataPartitionerController class method) (nirs4all.controllers.data.outlier_excluder.OutlierExcluderController class method) (nirs4all.controllers.data.OutlierExcluderController class method) (nirs4all.controllers.data.repetition.RepToPPController class method) (nirs4all.controllers.data.repetition.RepToSourcesController class method) (nirs4all.controllers.data.RepToPPController class method) (nirs4all.controllers.data.RepToSourcesController class method) (nirs4all.controllers.data.resampler.ResamplerController class method) (nirs4all.controllers.data.ResamplerController class method) (nirs4all.controllers.data.sample_augmentation.SampleAugmentationController class method) (nirs4all.controllers.data.sample_filter.SampleFilterController class method) (nirs4all.controllers.data.sample_partitioner.SamplePartitionerController class method) (nirs4all.controllers.data.SampleAugmentationController class method) (nirs4all.controllers.data.SampleFilterController class method) (nirs4all.controllers.data.SamplePartitionerController class method) (nirs4all.controllers.data.source_branch.SourceBranchController class method) (nirs4all.controllers.data.SourceBranchController class method) (nirs4all.controllers.DummyController class method) (nirs4all.controllers.FeatureAugmentationController class method) (nirs4all.controllers.flow.dummy.DummyController class method) (nirs4all.controllers.flow.DummyController class method) (nirs4all.controllers.FoldChartController class method) (nirs4all.controllers.models.base_model.BaseModelController class method) (nirs4all.controllers.models.BaseModelController class method) (nirs4all.controllers.OperatorController class method) (nirs4all.controllers.ResamplerController class method) (nirs4all.controllers.SampleAugmentationController class method) (nirs4all.controllers.SampleFilterController class method) (nirs4all.controllers.SpectraChartController class method) (nirs4all.controllers.SpectralDistributionController class method) (nirs4all.controllers.splitters.fold_file_loader.FoldFileLoaderController class method) (nirs4all.controllers.splitters.FoldFileLoaderController class method) (nirs4all.controllers.splitters.split.CrossValidatorController class method) (nirs4all.controllers.TransformerMixinController class method) (nirs4all.controllers.transforms.transformer.TransformerMixinController class method) (nirs4all.controllers.transforms.y_transformer.YTransformerMixinController class method) (nirs4all.controllers.YChartController class method) (nirs4all.controllers.YTransformerMixinController class method)

use_proba (nirs4all.controllers.models.stacking.MetaModelArtifact attribute), [1] (nirs4all.controllers.models.stacking.serialization.MetaModelArtifact attribute), [1] (nirs4all.operators.data.merge.MergeConfig attribute), [1] (nirs4all.operators.data.MergeConfig attribute), [1] (nirs4all.operators.models.meta.MetaModel attribute) (nirs4all.operators.models.MetaModel attribute) use_reconstructor (nirs4all.controllers.models.meta_model.MetaModelController attribute), [1] (nirs4all.controllers.models.MetaModelController attribute), [1] use_unicode (nirs4all.core.logging.progress.ProgressConfig attribute), [1] (nirs4all.core.logging.ProgressConfig attribute), [1] uses_dataset_aggregate (nirs4all.operators.data.repetition.RepetitionConfig property) (nirs4all.operators.data.RepetitionConfig property)

V

val (nirs4all.controllers.models.components.PartitionScores attribute) (nirs4all.controllers.models.components.score_calculator.PartitionScores attribute) (nirs4all.data.schema.config.FoldDefinition attribute) (nirs4all.data.schema.FoldDefinition attribute) val_score (nirs4all.controllers.models.stacking.serialization.SourceModelReference attribute), [1] (nirs4all.controllers.models.stacking.SourceModelReference attribute), [1] (nirs4all.operators.models.ModelCandidate attribute), [1] (nirs4all.operators.models.selection.ModelCandidate attribute), [1] VALID_LAYOUTS (nirs4all.pipeline.steps.parser.StepParser attribute) (nirs4all.pipeline.steps.StepParser attribute) valid_test_mask (nirs4all.controllers.models.ReconstructionResult attribute), [1] (nirs4all.controllers.models.stacking.ReconstructionResult attribute), [1] (nirs4all.controllers.models.stacking.reconstructor.ReconstructionResult attribute), [1] valid_train_mask (nirs4all.controllers.models.ReconstructionResult attribute), [1] (nirs4all.controllers.models.stacking.ReconstructionResult attribute), [1] (nirs4all.controllers.models.stacking.reconstructor.ReconstructionResult attribute), [1] VALIDATE (nirs4all.core.logging.events.EventType attribute) (nirs4all.core.logging.EventType attribute) validate() (nirs4all.api.result.RunResult method) (nirs4all.api.RunResult method) (nirs4all.controllers.base.BaseController method) (nirs4all.controllers.BaseController method) (nirs4all.controllers.models.FoldAlignmentValidator method) (nirs4all.controllers.models.stacking.branch_validator.BranchValidator method) (nirs4all.controllers.models.stacking.BranchValidator method) (nirs4all.controllers.models.stacking.FoldAlignmentValidator method) (nirs4all.controllers.models.stacking.reconstructor.FoldAlignmentValidator method) (nirs4all.data.ConfigValidator method) (nirs4all.data.schema.ConfigValidator method) (nirs4all.data.schema.validation.ConfigValidator method) (nirs4all.data.schema.validation.validators.ConfigValidator method) (nirs4all.operators.models.selection.SourceModelSelector method) (nirs4all.operators.models.SourceModelSelector method) (nirs4all.pipeline.config.generator.CartesianStrategy method) (nirs4all.pipeline.config.generator.ChainStrategy method) (nirs4all.pipeline.config.generator.ExpansionStrategy method) (nirs4all.pipeline.config.generator.GridStrategy method) (nirs4all.pipeline.config.generator.LogRangeStrategy method) (nirs4all.pipeline.config.generator.OrStrategy method) (nirs4all.pipeline.config.generator.RangeStrategy method) (nirs4all.pipeline.config.generator.SampleStrategy method) (nirs4all.pipeline.config.generator.ZipStrategy method) (nirs4all.RunResult method) validate_against_benchmark() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.validation) validate_all_branches_scope() (in module nirs4all.controllers.models.stacking) (in module nirs4all.controllers.models.stacking.crossbranch) validate_artifact() (nirs4all.controllers.models.stacking.MetaModelSerializer method) (nirs4all.controllers.models.stacking.serialization.MetaModelSerializer method) validate_artifact_id() (in module nirs4all.pipeline.storage.artifacts) (in module nirs4all.pipeline.storage.artifacts.utils) validate_branch_compatibility() (nirs4all.controllers.models.stacking.reconstructor.TrainingSetReconstructor method) (nirs4all.controllers.models.stacking.TrainingSetReconstructor method) (nirs4all.controllers.models.TrainingSetReconstructor method) validate_concentrations() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.validation) validate_config() (in module nirs4all.data.schema.validation) (in module nirs4all.data.schema.validation.validators) (in module nirs4all.pipeline.config.generator) validate_config_file() (in module nirs4all.config) (in module nirs4all.config.validator) validate_constraints() (in module nirs4all.pipeline.config.generator) validate_cross_branch_stacking() (nirs4all.controllers.models.stacking.crossbranch.CrossBranchValidator method) (nirs4all.controllers.models.stacking.CrossBranchValidator method) validate_data_sources() (nirs4all.data.DatasetConfigSchema method) (nirs4all.data.schema.config.DatasetConfigSchema method) (nirs4all.data.schema.DatasetConfigSchema method) validate_dataset_config() (in module nirs4all.config) (in module nirs4all.config.validator) validate_datasets() (in module nirs4all.analysis) (in module nirs4all.analysis.transfer_utils) validate_expanded_configs() (in module nirs4all.pipeline.config.generator) validate_feature_alignment() (nirs4all.controllers.models.stacking.MetaModelArtifact method) (nirs4all.controllers.models.stacking.serialization.MetaModelArtifact method) validate_fold_alignment (nirs4all.controllers.models.ReconstructorConfig attribute), [1] (nirs4all.controllers.models.stacking.config.ReconstructorConfig attribute), [1] (nirs4all.controllers.models.stacking.ReconstructorConfig attribute), [1] validate_fold_source() (nirs4all.data.schema.config.FoldConfig method) (nirs4all.data.schema.FoldConfig method) validate_inputs() (nirs4all.visualization.charts.base.BaseChart method) (nirs4all.visualization.charts.BaseChart method) (nirs4all.visualization.charts.candlestick.CandlestickChart method) (nirs4all.visualization.charts.CandlestickChart method) (nirs4all.visualization.charts.confusion_matrix.ConfusionMatrixChart method) (nirs4all.visualization.charts.ConfusionMatrixChart method) (nirs4all.visualization.charts.heatmap.HeatmapChart method) (nirs4all.visualization.charts.HeatmapChart method) (nirs4all.visualization.charts.histogram.ScoreHistogramChart method) (nirs4all.visualization.charts.ScoreHistogramChart method) (nirs4all.visualization.charts.top_k_comparison.TopKComparisonChart method) (nirs4all.visualization.charts.TopKComparisonChart method) validate_loss_compatibility() (nirs4all.controllers.models.utilities.ModelControllerUtils static method) validate_minimal_pipeline() (nirs4all.pipeline.minimal_predictor.MinimalPredictor method) (nirs4all.pipeline.MinimalPredictor method) validate_multi_level_stacking() (in module nirs4all.controllers.models.stacking) (in module nirs4all.controllers.models.stacking.multilevel) validate_partition_method() (nirs4all.data.PartitionConfig method) (nirs4all.data.schema.config.PartitionConfig method) (nirs4all.data.schema.PartitionConfig method) validate_pipeline_config() (in module nirs4all.config) (in module nirs4all.config.validator) validate_roles() (nirs4all.data.RoleAssigner method) (nirs4all.data.selection.role_assigner.RoleAssigner method) (nirs4all.data.selection.RoleAssigner method) validate_sample_alignment() (nirs4all.controllers.models.stacking.branch_validator.BranchValidator method) (nirs4all.controllers.models.stacking.BranchValidator method) validate_sample_coverage (nirs4all.controllers.models.ReconstructorConfig attribute), [1] (nirs4all.controllers.models.stacking.config.ReconstructorConfig attribute), [1] (nirs4all.controllers.models.stacking.ReconstructorConfig attribute), [1] validate_source_files() (nirs4all.data.schema.config.SourceConfig method) (nirs4all.data.schema.SourceConfig method) validate_sources() (nirs4all.controllers.models.stacking.multilevel.MultiLevelValidator method) (nirs4all.controllers.models.stacking.MultiLevelValidator method) validate_spec() (in module nirs4all.pipeline.config.generator) validate_spectra() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.validation)

validate_synthetic_output() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.validation) validate_trace_for_prediction() (nirs4all.pipeline.trace.extractor.TraceBasedExtractor method) (nirs4all.pipeline.trace.TraceBasedExtractor method) (nirs4all.pipeline.TraceBasedExtractor method) validate_variation_files() (nirs4all.data.schema.config.VariationConfig method) (nirs4all.data.schema.VariationConfig method) validate_wavelengths() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.validation) validation_errors (nirs4all.controllers.models.stacking.exceptions.InvalidMetaModelArtifactError attribute) (nirs4all.controllers.models.stacking.InvalidMetaModelArtifactError attribute) validation_result (nirs4all.controllers.models.ReconstructionResult attribute), [1] (nirs4all.controllers.models.stacking.ReconstructionResult attribute), [1] (nirs4all.controllers.models.stacking.reconstructor.ReconstructionResult attribute), [1] ValidationError, [1], [2] (class in nirs4all.controllers.models.stacking.reconstructor) (class in nirs4all.data) (class in nirs4all.data.schema) (class in nirs4all.data.schema.validation) (class in nirs4all.data.schema.validation.validators) ValidationResult (class in nirs4all.controllers.models) (class in nirs4all.controllers.models.stacking) (class in nirs4all.controllers.models.stacking.reconstructor) (class in nirs4all.data) (class in nirs4all.data.schema) (class in nirs4all.data.schema.validation) (class in nirs4all.data.schema.validation.validators) (class in nirs4all.pipeline.config.generator) ValidationSeverity (class in nirs4all.pipeline.config.generator) ValidationWarning (class in nirs4all.controllers.models.stacking.reconstructor) (class in nirs4all.data) (class in nirs4all.data.schema) (class in nirs4all.data.schema.validation) (class in nirs4all.data.schema.validation.validators) value (nirs4all.data.schema.validation.ValidationError attribute), [1] (nirs4all.data.schema.validation.validators.ValidationError attribute), [1] (nirs4all.data.schema.ValidationError attribute), [1] (nirs4all.data.synthetic.MetricResult attribute), [1] (nirs4all.data.synthetic.validation.MetricResult attribute), [1] (nirs4all.data.ValidationError attribute), [1] value_of() (nirs4all.pipeline.config.pipeline_config.PipelineConfigs class method) (nirs4all.pipeline.config.PipelineConfigs class method) (nirs4all.pipeline.PipelineConfigs class method) (nirs4all.PipelineConfigs class method) value_of_str() (nirs4all.pipeline.config.pipeline_config.PipelineConfigs class method) (nirs4all.pipeline.config.PipelineConfigs class method) (nirs4all.pipeline.PipelineConfigs class method) (nirs4all.PipelineConfigs class method) values (nirs4all.api.ExplainResult property) (nirs4all.api.PredictResult property) (nirs4all.api.result.ExplainResult property) (nirs4all.api.result.PredictResult property) (nirs4all.ExplainResult property) (nirs4all.PredictResult property) values_to_exclude (nirs4all.operators.filters.metadata.MetadataFilter attribute) (nirs4all.operators.filters.MetadataFilter attribute) values_to_keep (nirs4all.operators.filters.metadata.MetadataFilter attribute) (nirs4all.operators.filters.MetadataFilter attribute) VARIATION (nirs4all.data.schema.validation.error_codes.ErrorCategory attribute) (nirs4all.data.schema.validation.ErrorCategory attribute) variation_mode (nirs4all.data.DatasetConfigSchema attribute) (nirs4all.data.schema.config.DatasetConfigSchema attribute) (nirs4all.data.schema.DatasetConfigSchema attribute) variation_prefix (nirs4all.data.DatasetConfigSchema attribute) (nirs4all.data.schema.config.DatasetConfigSchema attribute) (nirs4all.data.schema.DatasetConfigSchema attribute) variation_select (nirs4all.data.DatasetConfigSchema attribute) (nirs4all.data.schema.config.DatasetConfigSchema attribute) (nirs4all.data.schema.DatasetConfigSchema attribute) VariationConfig (class in nirs4all.data.schema) (class in nirs4all.data.schema.config) VariationFileConfig (class in nirs4all.data.schema) (class in nirs4all.data.schema.config) VariationMode (class in nirs4all.data.schema) (class in nirs4all.data.schema.config) variations (nirs4all.data.DatasetConfigSchema attribute) (nirs4all.data.schema.config.DatasetConfigSchema attribute) (nirs4all.data.schema.DatasetConfigSchema attribute) variations_to_legacy_format() (nirs4all.data.DatasetConfigSchema method) (nirs4all.data.schema.config.DatasetConfigSchema method) (nirs4all.data.schema.DatasetConfigSchema method) VariationsParser (class in nirs4all.data.parsers) (class in nirs4all.data.parsers.files_parser) verbose (nirs4all.controllers.models.base_model.BaseModelController attribute) (nirs4all.controllers.models.BaseModelController attribute) (nirs4all.pipeline.bundle.BundleGenerator attribute) (nirs4all.pipeline.bundle.generator.BundleGenerator attribute) (nirs4all.pipeline.BundleGenerator attribute) (nirs4all.pipeline.execution.executor.PipelineExecutor attribute) (nirs4all.pipeline.execution.orchestrator.PipelineOrchestrator attribute) (nirs4all.pipeline.execution.PipelineExecutor attribute) (nirs4all.pipeline.execution.PipelineOrchestrator attribute) (nirs4all.pipeline.minimal_predictor.MinimalPredictor attribute) (nirs4all.pipeline.MinimalPredictor attribute) (nirs4all.pipeline.PipelineRunner attribute) (nirs4all.pipeline.runner.PipelineRunner attribute) (nirs4all.pipeline.steps.ControllerRouter attribute) (nirs4all.pipeline.steps.router.ControllerRouter attribute) (nirs4all.pipeline.steps.step_runner.StepRunner attribute) (nirs4all.pipeline.steps.StepRunner attribute) (nirs4all.PipelineRunner attribute) version (nirs4all.pipeline.storage.artifacts.ArtifactRecord attribute), [1] (nirs4all.pipeline.storage.artifacts.types.ArtifactRecord attribute), [1] VINYL (nirs4all.data.synthetic.FunctionalGroupType attribute) (nirs4all.data.synthetic.procedural.FunctionalGroupType attribute) visualizations (nirs4all.api.ExplainResult attribute), [1] (nirs4all.api.result.ExplainResult attribute), [1] (nirs4all.ExplainResult attribute), [1] VOLUME_3D (nirs4all.data.FeatureLayout attribute) VOLUME_3D_TRANSPOSE (nirs4all.data.FeatureLayout attribute) VOTE (nirs4all.data.aggregation.AggregationMethod attribute) (nirs4all.data.aggregation.aggregator.AggregationMethod attribute) (nirs4all.data.schema.AggregateMethod attribute) (nirs4all.data.schema.config.AggregateMethod attribute)

W

W_ (nirs4all.operators.models.OKLMPLS attribute) (nirs4all.operators.models.sklearn.OKLMPLS attribute) (nirs4all.operators.models.sklearn.oklmpls.OKLMPLS attribute) warm_up_drift (nirs4all.data.synthetic.InstrumentArchetype attribute), [1] (nirs4all.data.synthetic.instruments.InstrumentArchetype attribute), [1] WARNING (nirs4all.core.logging.events.EventType attribute) (nirs4all.core.logging.events.Status attribute) (nirs4all.core.logging.EventType attribute) warning (nirs4all.core.logging.formatters.Symbols property) WARNING (nirs4all.core.logging.Status attribute) warning (nirs4all.core.logging.Symbols property) WARNING (nirs4all.data.schema.validation.error_codes.ErrorSeverity attribute) (nirs4all.data.schema.validation.ErrorSeverity attribute) (nirs4all.pipeline.config.generator.ValidationSeverity attribute) warnings (nirs4all.controllers.models.stacking.branch_validator.BranchValidationResult attribute) (nirs4all.controllers.models.stacking.BranchValidationResult attribute) (nirs4all.controllers.models.stacking.crossbranch.CrossBranchValidationResult attribute), [1] (nirs4all.controllers.models.stacking.CrossBranchValidationResult attribute), [1] (nirs4all.controllers.models.stacking.LevelValidationResult attribute), [1] (nirs4all.controllers.models.stacking.multilevel.LevelValidationResult attribute), [1] (nirs4all.controllers.models.stacking.reconstructor.ValidationResult attribute), [1] (nirs4all.controllers.models.stacking.ValidationResult attribute), [1] (nirs4all.controllers.models.ValidationResult attribute), [1] (nirs4all.data.detection.DetectionResult attribute), [1] (nirs4all.data.detection.detector.DetectionResult attribute), [1] (nirs4all.data.parsers.base.ParserResult attribute), [1] (nirs4all.data.parsers.ParserResult attribute), [1] (nirs4all.data.schema.validation.DiagnosticReport property) (nirs4all.data.schema.validation.error_codes.DiagnosticReport property) (nirs4all.data.schema.validation.ValidationResult attribute), [1] (nirs4all.data.schema.validation.validators.ValidationResult attribute), [1] (nirs4all.data.schema.ValidationResult attribute), [1] (nirs4all.data.synthetic.SpectralRealismScore attribute), [1] (nirs4all.data.synthetic.validation.SpectralRealismScore attribute), [1] (nirs4all.data.ValidationResult attribute), [1] (nirs4all.pipeline.config.generator.ValidationResult attribute), [1] WATER (nirs4all.data.synthetic.FunctionalGroupType attribute) (nirs4all.data.synthetic.procedural.FunctionalGroupType attribute) water_activity (nirs4all.data.synthetic.environmental.MoistureConfig attribute), [1] (nirs4all.data.synthetic.MoistureConfig attribute), [1] water_band_intensity (nirs4all.data.synthetic.fitter.SpectralProperties attribute), [1] (nirs4all.data.synthetic.SpectralProperties attribute), [1] water_band_shift (nirs4all.data.synthetic.EnvironmentalInference attribute), [1] (nirs4all.data.synthetic.fitter.EnvironmentalInference attribute), [1] water_band_variation (nirs4all.data.synthetic.fitter.SpectralProperties attribute), [1] (nirs4all.data.synthetic.SpectralProperties attribute), [1] WATER_BANDS_CM1 (nirs4all.data.signal_type.SignalTypeDetector attribute) (nirs4all.data.SignalTypeDetector attribute) WATER_BANDS_NM (nirs4all.data.signal_type.SignalTypeDetector attribute) (nirs4all.data.SignalTypeDetector attribute) WATER_BOUND (nirs4all.data.synthetic.environmental.SpectralRegion attribute) (nirs4all.data.synthetic.SpectralRegion attribute) WATER_FREE (nirs4all.data.synthetic.environmental.SpectralRegion attribute) (nirs4all.data.synthetic.SpectralRegion attribute) WAVELENGTH (nirs4all.data.HeaderUnit attribute) (nirs4all.data.schema.config.HeaderUnit attribute) (nirs4all.data.schema.HeaderUnit attribute) wavelength_accuracy (nirs4all.data.synthetic.InstrumentArchetype attribute), [1] (nirs4all.data.synthetic.instruments.InstrumentArchetype attribute), [1] wavelength_coef_std (nirs4all.data.synthetic.EMSCConfig attribute), [1] (nirs4all.data.synthetic.scattering.EMSCConfig attribute), [1] wavelength_end (nirs4all.data.synthetic.builder.BuilderState attribute) (nirs4all.data.synthetic.config.FeatureConfig attribute), [1] (nirs4all.data.synthetic.FeatureConfig attribute), [1] (nirs4all.data.synthetic.FittedParameters attribute), [1] (nirs4all.data.synthetic.fitter.FittedParameters attribute), [1] (nirs4all.data.synthetic.SourceConfig attribute), [1] (nirs4all.data.synthetic.sources.SourceConfig attribute), [1] wavelength_exponent (nirs4all.data.synthetic.measurement_modes.ScatteringConfig attribute), [1] (nirs4all.data.synthetic.ParticleSizeConfig attribute), [1] (nirs4all.data.synthetic.scattering.ParticleSizeConfig attribute), [1] (nirs4all.data.synthetic.scattering.ScatteringCoefficientConfig attribute), [1] (nirs4all.data.synthetic.ScatteringCoefficientConfig attribute), [1] (nirs4all.data.synthetic.ScatteringConfig attribute), [1] wavelength_jitter (nirs4all.data.synthetic.instruments.MultiScanConfig attribute), [1] (nirs4all.data.synthetic.MultiScanConfig attribute), [1] wavelength_nm (nirs4all.data.synthetic.CombinationBandResult attribute) (nirs4all.data.synthetic.OvertoneResult attribute) (nirs4all.data.synthetic.wavenumber.CombinationBandResult attribute) (nirs4all.data.synthetic.wavenumber.OvertoneResult attribute) wavelength_range (nirs4all.data.synthetic.BenchmarkDatasetInfo attribute), [1] (nirs4all.data.synthetic.benchmarks.BenchmarkDatasetInfo attribute), [1] (nirs4all.data.synthetic.DomainConfig attribute), [1] (nirs4all.data.synthetic.domains.DomainConfig attribute), [1] (nirs4all.data.synthetic.environmental.TemperatureEffectParams attribute), [1] (nirs4all.data.synthetic.fitter.InstrumentInference attribute), [1] (nirs4all.data.synthetic.fitter.SpectralProperties attribute), [1] (nirs4all.data.synthetic.InstrumentArchetype attribute), [1] (nirs4all.data.synthetic.InstrumentInference attribute), [1] (nirs4all.data.synthetic.instruments.InstrumentArchetype attribute), [1] (nirs4all.data.synthetic.instruments.SensorConfig attribute), [1] (nirs4all.data.synthetic.procedural.ProceduralComponentConfig attribute), [1] (nirs4all.data.synthetic.ProceduralComponentConfig attribute), [1] (nirs4all.data.synthetic.SensorConfig attribute), [1] (nirs4all.data.synthetic.SpectralProperties attribute), [1] (nirs4all.data.synthetic.TemperatureEffectParams attribute), [1] wavelength_reference_nm (nirs4all.data.synthetic.scattering.ScatteringCoefficientConfig attribute), [1] (nirs4all.data.synthetic.ScatteringCoefficientConfig attribute), [1] wavelength_start (nirs4all.data.synthetic.builder.BuilderState attribute) (nirs4all.data.synthetic.config.FeatureConfig attribute), [1] (nirs4all.data.synthetic.FeatureConfig attribute), [1] (nirs4all.data.synthetic.FittedParameters attribute), [1] (nirs4all.data.synthetic.fitter.FittedParameters attribute), [1] (nirs4all.data.synthetic.SourceConfig attribute), [1] (nirs4all.data.synthetic.sources.SourceConfig attribute), [1] wavelength_step (nirs4all.data.synthetic.builder.BuilderState attribute) (nirs4all.data.synthetic.config.FeatureConfig attribute), [1] (nirs4all.data.synthetic.FeatureConfig attribute), [1] (nirs4all.data.synthetic.FittedParameters attribute), [1] (nirs4all.data.synthetic.fitter.FittedParameters attribute), [1] (nirs4all.data.synthetic.SourceConfig attribute), [1] (nirs4all.data.synthetic.sources.SourceConfig attribute), [1] wavelength_to_wavenumber() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.wavenumber) wavelengths (nirs4all.data.synthetic.benchmarks.LoadedBenchmarkDataset attribute), [1] (nirs4all.data.synthetic.detectors.DetectorSpectralResponse attribute), [1] (nirs4all.data.synthetic.DetectorSpectralResponse attribute), [1] (nirs4all.data.synthetic.fitter.SpectralProperties attribute), [1] (nirs4all.data.synthetic.generator.SyntheticNIRSGenerator attribute) (nirs4all.data.synthetic.LoadedBenchmarkDataset attribute), [1] (nirs4all.data.synthetic.MultiSourceResult attribute), [1] (nirs4all.data.synthetic.sources.MultiSourceResult attribute), [1] (nirs4all.data.synthetic.SpectralProperties attribute), [1] (nirs4all.data.synthetic.SyntheticNIRSGenerator attribute) wavelengths_cm1() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.SpectroDataset method) wavelengths_nm() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.SpectroDataset method) WavelengthShift (class in nirs4all.operators.transforms) WavelengthStretch (class in nirs4all.operators.transforms) Wavelet (class in nirs4all.operators) (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.nirs) wavelet_transform() (in module nirs4all.operators) (in module nirs4all.operators.transforms) (in module nirs4all.operators.transforms.nirs) WaveletFeatures (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.nirs) WaveletPCA (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.nirs) WaveletSVD (class in nirs4all.operators.transforms) (class in nirs4all.operators.transforms.nirs) WAVENUMBER (nirs4all.data.HeaderUnit attribute) (nirs4all.data.schema.config.HeaderUnit attribute) (nirs4all.data.schema.HeaderUnit attribute) wavenumber_cm (nirs4all.data.synthetic.CombinationBandResult attribute) (nirs4all.data.synthetic.OvertoneResult attribute) (nirs4all.data.synthetic.wavenumber.CombinationBandResult attribute) (nirs4all.data.synthetic.wavenumber.OvertoneResult attribute)

wavenumber_to_wavelength() (in module nirs4all.data.synthetic) (in module nirs4all.data.synthetic.wavenumber) weight_metric (nirs4all.operators.data.BranchPredictionConfig attribute), [1] (nirs4all.operators.data.merge.BranchPredictionConfig attribute), [1] WEIGHTED_AVERAGE (nirs4all.pipeline.FoldStrategy attribute), [1] (nirs4all.pipeline.resolver.FoldStrategy attribute), [1] WEIGHTED_MEAN (nirs4all.operators.data.AggregationStrategy attribute), [1] (nirs4all.operators.data.merge.AggregationStrategy attribute), [1] (nirs4all.operators.models.meta.TestAggregation attribute), [1] (nirs4all.operators.models.TestAggregation attribute), [1] with_artifact_loader() (nirs4all.pipeline.execution.builder.ExecutorBuilder method) (nirs4all.pipeline.execution.ExecutorBuilder method) with_artifact_registry() (nirs4all.pipeline.execution.builder.ExecutorBuilder method) (nirs4all.pipeline.execution.ExecutorBuilder method) with_augmented() (nirs4all.pipeline.config.context.DataSelector method) (nirs4all.pipeline.config.DataSelector method) with_batch_effects() (nirs4all.data.synthetic.builder.SyntheticDatasetBuilder method) (nirs4all.data.synthetic.SyntheticDatasetBuilder method) with_branch() (nirs4all.pipeline.config.context.DataSelector method) (nirs4all.pipeline.config.context.ExecutionContext method) (nirs4all.pipeline.config.DataSelector method) (nirs4all.pipeline.config.ExecutionContext method) with_classification() (nirs4all.data.synthetic.builder.SyntheticDatasetBuilder method) (nirs4all.data.synthetic.SyntheticDatasetBuilder method) with_comma_delimiter() (nirs4all.data.synthetic.CSVVariationGenerator method) (nirs4all.data.synthetic.exporter.CSVVariationGenerator method) with_complex_target_landscape() (nirs4all.data.synthetic.builder.SyntheticDatasetBuilder method) (nirs4all.data.synthetic.SyntheticDatasetBuilder method) with_continue_on_error() (nirs4all.pipeline.execution.builder.ExecutorBuilder method) (nirs4all.pipeline.execution.ExecutorBuilder method) with_dataset() (nirs4all.pipeline.execution.builder.ExecutorBuilder method) (nirs4all.pipeline.execution.ExecutorBuilder method) with_features() (nirs4all.data.synthetic.builder.SyntheticDatasetBuilder method) (nirs4all.data.synthetic.SyntheticDatasetBuilder method) with_fold() (nirs4all.pipeline.config.context.DataSelector method) (nirs4all.pipeline.config.DataSelector method) (nirs4all.pipeline.storage.artifacts.operator_chain.OperatorNode method) (nirs4all.pipeline.storage.artifacts.OperatorNode method) with_layout() (nirs4all.pipeline.config.context.DataSelector method) (nirs4all.pipeline.config.context.ExecutionContext method) (nirs4all.pipeline.config.DataSelector method) (nirs4all.pipeline.config.ExecutionContext method) with_manifest_manager() (nirs4all.pipeline.execution.builder.ExecutorBuilder method) (nirs4all.pipeline.execution.ExecutorBuilder method) with_metadata() (nirs4all.data.synthetic.builder.SyntheticDatasetBuilder method) (nirs4all.data.synthetic.SyntheticDatasetBuilder method) (nirs4all.pipeline.config.context.ExecutionContext method) (nirs4all.pipeline.config.ExecutionContext method) with_mode() (nirs4all.pipeline.execution.builder.ExecutorBuilder method) (nirs4all.pipeline.execution.ExecutorBuilder method) with_nonlinear_targets() (nirs4all.data.synthetic.builder.SyntheticDatasetBuilder method) (nirs4all.data.synthetic.SyntheticDatasetBuilder method) with_output() (nirs4all.data.synthetic.builder.SyntheticDatasetBuilder method) (nirs4all.data.synthetic.SyntheticDatasetBuilder method) with_partition() (nirs4all.pipeline.config.context.DataSelector method) (nirs4all.pipeline.config.context.ExecutionContext method) (nirs4all.pipeline.config.DataSelector method) (nirs4all.pipeline.config.ExecutionContext method) with_partitions() (nirs4all.data.synthetic.builder.SyntheticDatasetBuilder method) (nirs4all.data.synthetic.SyntheticDatasetBuilder method) with_pipeline_id() (nirs4all.pipeline.storage.artifacts.operator_chain.OperatorChain method) (nirs4all.pipeline.storage.artifacts.OperatorChain method) with_plots_visible() (nirs4all.pipeline.execution.builder.ExecutorBuilder method) (nirs4all.pipeline.execution.ExecutorBuilder method) with_precision() (nirs4all.data.synthetic.CSVVariationGenerator method) (nirs4all.data.synthetic.exporter.CSVVariationGenerator method) with_processing() (nirs4all.pipeline.config.context.DataSelector method) (nirs4all.pipeline.config.context.ExecutionContext method) (nirs4all.pipeline.config.DataSelector method) (nirs4all.pipeline.config.ExecutionContext method) with_row_index() (nirs4all.data.synthetic.CSVVariationGenerator method) (nirs4all.data.synthetic.exporter.CSVVariationGenerator method) with_run_directory() (nirs4all.pipeline.execution.builder.ExecutorBuilder method) (nirs4all.pipeline.execution.ExecutorBuilder method) with_save_artifacts() (nirs4all.pipeline.execution.builder.ExecutorBuilder method) (nirs4all.pipeline.execution.ExecutorBuilder method) with_save_charts() (nirs4all.pipeline.execution.builder.ExecutorBuilder method) (nirs4all.pipeline.execution.ExecutorBuilder method) with_saver() (nirs4all.pipeline.execution.builder.ExecutorBuilder method) (nirs4all.pipeline.execution.ExecutorBuilder method) with_semicolon_delimiter() (nirs4all.data.synthetic.CSVVariationGenerator method) (nirs4all.data.synthetic.exporter.CSVVariationGenerator method) with_show_spinner() (nirs4all.pipeline.execution.builder.ExecutorBuilder method) (nirs4all.pipeline.execution.ExecutorBuilder method) with_source() (nirs4all.pipeline.storage.artifacts.operator_chain.OperatorNode method) (nirs4all.pipeline.storage.artifacts.OperatorNode method) with_sources() (nirs4all.data.synthetic.builder.SyntheticDatasetBuilder method) (nirs4all.data.synthetic.SyntheticDatasetBuilder method) with_step_number() (nirs4all.pipeline.config.context.ExecutionContext method) (nirs4all.pipeline.config.ExecutionContext method) with_step_runner() (nirs4all.pipeline.execution.builder.ExecutorBuilder method) (nirs4all.pipeline.execution.ExecutorBuilder method) with_tab_delimiter() (nirs4all.data.synthetic.CSVVariationGenerator method) (nirs4all.data.synthetic.exporter.CSVVariationGenerator method) with_target_complexity() (nirs4all.data.synthetic.builder.SyntheticDatasetBuilder method) (nirs4all.data.synthetic.SyntheticDatasetBuilder method) with_targets() (nirs4all.data.synthetic.builder.SyntheticDatasetBuilder method) (nirs4all.data.synthetic.SyntheticDatasetBuilder method) with_verbose() (nirs4all.pipeline.execution.builder.ExecutorBuilder method) (nirs4all.pipeline.execution.ExecutorBuilder method) with_workspace() (nirs4all.pipeline.execution.builder.ExecutorBuilder method) (nirs4all.pipeline.execution.ExecutorBuilder method) with_y() (nirs4all.pipeline.config.context.ExecutionContext method) (nirs4all.pipeline.config.ExecutionContext method) WITHIN_PARTITION_ONLY (nirs4all.controllers.models.stacking.branch_validator.StackingCompatibility attribute) (nirs4all.controllers.models.stacking.StackingCompatibility attribute) without_headers() (nirs4all.data.synthetic.CSVVariationGenerator method) (nirs4all.data.synthetic.exporter.CSVVariationGenerator method) WORKFLOW (nirs4all.pipeline.steps.parser.StepType attribute) WORKFLOW_KEYWORDS (nirs4all.pipeline.steps.parser.StepParser attribute) (nirs4all.pipeline.steps.StepParser attribute) workspace (nirs4all.pipeline.execution.builder.ExecutorBuilder property) (nirs4all.pipeline.execution.ExecutorBuilder property) (nirs4all.pipeline.storage.artifacts.artifact_loader.ArtifactLoader attribute) (nirs4all.pipeline.storage.artifacts.artifact_registry.ArtifactRegistry attribute) (nirs4all.pipeline.storage.artifacts.ArtifactLoader attribute) (nirs4all.pipeline.storage.artifacts.ArtifactRegistry attribute) workspace_init() (in module nirs4all.cli.commands.workspace) workspace_list_library() (in module nirs4all.cli.commands.workspace) workspace_list_runs() (in module nirs4all.cli.commands.workspace) workspace_path (nirs4all.api.Session attribute) (nirs4all.api.Session property) (nirs4all.api.session.Session attribute) (nirs4all.api.session.Session property) (nirs4all.pipeline.bundle.BundleGenerator attribute) (nirs4all.pipeline.bundle.generator.BundleGenerator attribute) (nirs4all.pipeline.BundleGenerator attribute) (nirs4all.pipeline.execution.orchestrator.PipelineOrchestrator attribute) (nirs4all.pipeline.execution.PipelineOrchestrator attribute) (nirs4all.pipeline.PipelineRunner attribute) (nirs4all.pipeline.PredictionResolver attribute) (nirs4all.pipeline.resolver.PredictionResolver attribute) (nirs4all.pipeline.runner.PipelineRunner attribute) (nirs4all.PipelineRunner attribute) (nirs4all.Session attribute) (nirs4all.Session property) workspace_query_best() (in module nirs4all.cli.commands.workspace) workspace_query_filter() (in module nirs4all.cli.commands.workspace) workspace_stats() (in module nirs4all.cli.commands.workspace) WorkspaceExporter (class in nirs4all.pipeline) (class in nirs4all.pipeline.storage) (class in nirs4all.pipeline.storage.io_exporter) wrap() (nirs4all.core.logging.progress.ProgressBar class method) (nirs4all.core.logging.ProgressBar class method) writer (nirs4all.pipeline.storage.io.SimulationSaver property) (nirs4all.pipeline.storage.SimulationSaver property)

X

X (nirs4all.data.performance.lazy_loader.LazyDataset property) (nirs4all.data.performance.LazyDataset property) (nirs4all.data.selection.role_assigner.RoleAssignmentResult property) (nirs4all.data.synthetic.benchmarks.LoadedBenchmarkDataset attribute), [1] (nirs4all.data.synthetic.LoadedBenchmarkDataset attribute), [1] x() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.features.Features method) (nirs4all.data.FeatureSource method) (nirs4all.data.SpectroDataset method) x_indices() (nirs4all.data.indexer.Indexer method) x_loadings_ (nirs4all.operators.models.RecursivePLS attribute) (nirs4all.operators.models.RobustPLS attribute) (nirs4all.operators.models.SIMPLS attribute) (nirs4all.operators.models.sklearn.recursive_pls.RecursivePLS attribute) (nirs4all.operators.models.sklearn.RecursivePLS attribute) (nirs4all.operators.models.sklearn.robust_pls.RobustPLS attribute) (nirs4all.operators.models.sklearn.RobustPLS attribute) (nirs4all.operators.models.sklearn.SIMPLS attribute) (nirs4all.operators.models.sklearn.simpls.SIMPLS attribute) x_mean_ (nirs4all.operators.models.RecursivePLS attribute) (nirs4all.operators.models.RobustPLS attribute) (nirs4all.operators.models.SIMPLS attribute) (nirs4all.operators.models.sklearn.recursive_pls.RecursivePLS attribute) (nirs4all.operators.models.sklearn.RecursivePLS attribute) (nirs4all.operators.models.sklearn.robust_pls.RobustPLS attribute) (nirs4all.operators.models.sklearn.RobustPLS attribute) (nirs4all.operators.models.sklearn.SIMPLS attribute) (nirs4all.operators.models.sklearn.simpls.SIMPLS attribute) x_scores_ (nirs4all.operators.models.RobustPLS attribute) (nirs4all.operators.models.SIMPLS attribute) (nirs4all.operators.models.sklearn.robust_pls.RobustPLS attribute) (nirs4all.operators.models.sklearn.RobustPLS attribute) (nirs4all.operators.models.sklearn.SIMPLS attribute) (nirs4all.operators.models.sklearn.simpls.SIMPLS attribute)

x_shape (nirs4all.data.performance.lazy_loader.LazyDataset property) (nirs4all.data.performance.LazyDataset property) x_std_ (nirs4all.operators.models.RecursivePLS attribute) (nirs4all.operators.models.RobustPLS attribute) (nirs4all.operators.models.SIMPLS attribute) (nirs4all.operators.models.sklearn.recursive_pls.RecursivePLS attribute) (nirs4all.operators.models.sklearn.RecursivePLS attribute) (nirs4all.operators.models.sklearn.robust_pls.RobustPLS attribute) (nirs4all.operators.models.sklearn.RobustPLS attribute) (nirs4all.operators.models.sklearn.SIMPLS attribute) (nirs4all.operators.models.sklearn.simpls.SIMPLS attribute) X_test_meta (nirs4all.controllers.models.ReconstructionResult attribute), [1] (nirs4all.controllers.models.stacking.ReconstructionResult attribute), [1] (nirs4all.controllers.models.stacking.reconstructor.ReconstructionResult attribute), [1] X_train_meta (nirs4all.controllers.models.ReconstructionResult attribute), [1] (nirs4all.controllers.models.stacking.ReconstructionResult attribute), [1] (nirs4all.controllers.models.stacking.reconstructor.ReconstructionResult attribute), [1] x_weights_ (nirs4all.operators.models.RecursivePLS attribute) (nirs4all.operators.models.RobustPLS attribute) (nirs4all.operators.models.SIMPLS attribute) (nirs4all.operators.models.sklearn.recursive_pls.RecursivePLS attribute) (nirs4all.operators.models.sklearn.RecursivePLS attribute) (nirs4all.operators.models.sklearn.robust_pls.RobustPLS attribute) (nirs4all.operators.models.sklearn.RobustPLS attribute) (nirs4all.operators.models.sklearn.SIMPLS attribute) (nirs4all.operators.models.sklearn.simpls.SIMPLS attribute) XOutlierFilter (class in nirs4all.operators.filters) (class in nirs4all.operators.filters.x_outlier)

Y

y (nirs4all.data.performance.lazy_loader.LazyDataset property) (nirs4all.data.performance.LazyDataset property) (nirs4all.data.selection.role_assigner.RoleAssignmentResult property) (nirs4all.data.synthetic.benchmarks.LoadedBenchmarkDataset attribute), [1] (nirs4all.data.synthetic.LoadedBenchmarkDataset attribute), [1] (nirs4all.pipeline.config.context.DataSelector attribute), [1] (nirs4all.pipeline.config.DataSelector attribute), [1] y() (nirs4all.data.dataset.SpectroDataset method) (nirs4all.data.SpectroDataset method) (nirs4all.data.targets.Targets method) y_indices() (nirs4all.data.indexer.Indexer method) y_loadings_ (nirs4all.operators.models.RecursivePLS attribute) (nirs4all.operators.models.RobustPLS attribute) (nirs4all.operators.models.SIMPLS attribute) (nirs4all.operators.models.sklearn.recursive_pls.RecursivePLS attribute) (nirs4all.operators.models.sklearn.RecursivePLS attribute) (nirs4all.operators.models.sklearn.robust_pls.RobustPLS attribute) (nirs4all.operators.models.sklearn.RobustPLS attribute) (nirs4all.operators.models.sklearn.SIMPLS attribute) (nirs4all.operators.models.sklearn.simpls.SIMPLS attribute) y_mean_ (nirs4all.operators.models.RecursivePLS attribute) (nirs4all.operators.models.RobustPLS attribute) (nirs4all.operators.models.SIMPLS attribute) (nirs4all.operators.models.sklearn.recursive_pls.RecursivePLS attribute) (nirs4all.operators.models.sklearn.RecursivePLS attribute) (nirs4all.operators.models.sklearn.robust_pls.RobustPLS attribute) (nirs4all.operators.models.sklearn.RobustPLS attribute) (nirs4all.operators.models.sklearn.SIMPLS attribute) (nirs4all.operators.models.sklearn.simpls.SIMPLS attribute) y_pred (nirs4all.api.PredictResult attribute), [1] (nirs4all.api.result.PredictResult attribute), [1] (nirs4all.controllers.models.components.PartitionPrediction attribute) (nirs4all.controllers.models.components.prediction_assembler.PartitionPrediction attribute) (nirs4all.PredictResult attribute), [1]

y_processing (nirs4all.pipeline.config.context.PipelineState attribute), [1] (nirs4all.pipeline.config.PipelineState attribute), [1] y_scores_ (nirs4all.operators.models.RobustPLS attribute) (nirs4all.operators.models.SIMPLS attribute) (nirs4all.operators.models.sklearn.robust_pls.RobustPLS attribute) (nirs4all.operators.models.sklearn.RobustPLS attribute) (nirs4all.operators.models.sklearn.SIMPLS attribute) (nirs4all.operators.models.sklearn.simpls.SIMPLS attribute) y_shape (nirs4all.data.performance.lazy_loader.LazyDataset property) (nirs4all.data.performance.LazyDataset property) y_std_ (nirs4all.operators.models.RecursivePLS attribute) (nirs4all.operators.models.RobustPLS attribute) (nirs4all.operators.models.SIMPLS attribute) (nirs4all.operators.models.sklearn.recursive_pls.RecursivePLS attribute) (nirs4all.operators.models.sklearn.RecursivePLS attribute) (nirs4all.operators.models.sklearn.robust_pls.RobustPLS attribute) (nirs4all.operators.models.sklearn.RobustPLS attribute) (nirs4all.operators.models.sklearn.SIMPLS attribute) (nirs4all.operators.models.sklearn.simpls.SIMPLS attribute) y_test (nirs4all.controllers.models.ReconstructionResult attribute), [1] (nirs4all.controllers.models.stacking.ReconstructionResult attribute), [1] (nirs4all.controllers.models.stacking.reconstructor.ReconstructionResult attribute), [1] y_train (nirs4all.controllers.models.ReconstructionResult attribute), [1] (nirs4all.controllers.models.stacking.ReconstructionResult attribute), [1] (nirs4all.controllers.models.stacking.reconstructor.ReconstructionResult attribute), [1] y_true (nirs4all.controllers.models.components.PartitionPrediction attribute) (nirs4all.controllers.models.components.prediction_assembler.PartitionPrediction attribute) YAML (nirs4all.data.serialization.serializer.SerializationFormat attribute) YChartController (class in nirs4all.controllers) (class in nirs4all.controllers.charts.targets) YOutlierFilter (class in nirs4all.operators) (class in nirs4all.operators.filters) (class in nirs4all.operators.filters.y_outlier) YTransformerMixinController (class in nirs4all.controllers) (class in nirs4all.controllers.transforms.y_transformer)

Z

zeros (nirs4all.data.synthetic.accelerated.AcceleratedArrays attribute) (nirs4all.data.synthetic.AcceleratedArrays attribute)

ZipStrategy (class in nirs4all.pipeline.config.generator)